RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
HERPUD1-214ENST00000568651 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
HERPUD1-214ENST00000568651 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
HERPUD1-214ENST00000568651 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-214ENST00000568651 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
HERPUD1-214ENST00000568651 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
HERPUD1-214ENST00000568651 MAP3K7O43318 606 aa12.09□□□□□ -0.47
HERPUD1-214ENST00000568651 GIGYF2Q6Y7W6 1299 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-214ENST00000568651 SLAIN1Q8ND83 568 aa12.09□□□□□ -0.47
HERPUD1-214ENST00000568651 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-214ENST00000568651 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
HERPUD1-214ENST00000568651 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.48
HERPUD1-214ENST00000568651 PCDHGA10Q9Y5H3 936 aa12.08□□□□□ -0.48
HERPUD1-214ENST00000568651 CLCN1P35523 988 aa12.07□□□□□ -0.48
HERPUD1-214ENST00000568651 TMUB1Q9BVT8 246 aa12.07□□□□□ -0.48
HERPUD1-214ENST00000568651 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
HERPUD1-214ENST00000568651 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-214ENST00000568651 KDM4FA0A1W2PPD8 638 aa12.06□□□□□ -0.48
HERPUD1-214ENST00000568651 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
HERPUD1-214ENST00000568651 FLIIQ13045 1269 aa12.05□□□□□ -0.48
HERPUD1-214ENST00000568651 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
HERPUD1-214ENST00000568651 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
HERPUD1-214ENST00000568651 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
HERPUD1-214ENST00000568651 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
HERPUD1-214ENST00000568651 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
HERPUD1-214ENST00000568651 MS4A1P11836 297 aa12.02□□□□□ -0.49
HERPUD1-214ENST00000568651 OATP04181 439 aa12□□□□□ -0.49
HERPUD1-214ENST00000568651 FOSBP53539 338 aa12□□□□□ -0.49
HERPUD1-214ENST00000568651 SH3D19Q5HYK7 790 aa12□□□□□ -0.49
HERPUD1-214ENST00000568651 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-214ENST00000568651 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-214ENST00000568651 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
HERPUD1-214ENST00000568651 REPIN1Q9BWE0 567 aaKnown RBP11.99□□□□□ -0.49
HERPUD1-214ENST00000568651 DCAF1Q9Y4B6 1507 aa11.99□□□□□ -0.49
HERPUD1-214ENST00000568651 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
HERPUD1-214ENST00000568651 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
HERPUD1-214ENST00000568651 METTL3Q86U44 580 aaKnown RBP11.95□□□□□ -0.5
HERPUD1-214ENST00000568651 TTC13Q8NBP0 860 aa11.95□□□□□ -0.5
HERPUD1-214ENST00000568651 ZSWIM6Q9HCJ5 1215 aa11.95□□□□□ -0.5
HERPUD1-214ENST00000568651 C6orf132Q5T0Z8 1188 aa11.94□□□□□ -0.5
HERPUD1-214ENST00000568651 ZDHHC16Q969W1 377 aa11.94□□□□□ -0.5
HERPUD1-214ENST00000568651 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
HERPUD1-214ENST00000568651 SSTR3P32745 418 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-214ENST00000568651 DOK7Q18PE1 504 aa11.93□□□□□ -0.5
HERPUD1-214ENST00000568651 POTEHQ6S545 545 aa11.93□□□□□ -0.5
HERPUD1-214ENST00000568651 FAM217BQ9NTX9 383 aaPredicted RBP11.93□□□□□ -0.5
HERPUD1-214ENST00000568651 SKIV2LQ15477 1246 aaKnown RBP11.92□□□□□ -0.5
HERPUD1-214ENST00000568651 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
HERPUD1-214ENST00000568651 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
HERPUD1-214ENST00000568651 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
HERPUD1-214ENST00000568651 PADI6Q6TGC4 694 aa11.9□□□□□ -0.5
HERPUD1-214ENST00000568651 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
HERPUD1-214ENST00000568651 ZNF454Q8N9F8 522 aa11.89□□□□□ -0.51
HERPUD1-214ENST00000568651 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-214ENST00000568651 CUX2O14529 1486 aa11.89□□□□□ -0.51
HERPUD1-214ENST00000568651 BEGAINQ9BUH8 593 aa11.88□□□□□ -0.51
HERPUD1-214ENST00000568651 A6NJR5 290 aa11.86□□□□□ -0.51
HERPUD1-214ENST00000568651 PRSS12P56730 875 aa11.86□□□□□ -0.51
HERPUD1-214ENST00000568651 DIXDC1Q155Q3 683 aa11.86□□□□□ -0.51
HERPUD1-214ENST00000568651 PSDA5PKW4 1024 aaPredicted RBP11.85□□□□□ -0.51
HERPUD1-214ENST00000568651 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
HERPUD1-214ENST00000568651 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
HERPUD1-214ENST00000568651 ADAM33Q9BZ11 813 aa11.84□□□□□ -0.51
HERPUD1-214ENST00000568651 NUDT7P0C024 238 aa11.83□□□□□ -0.52
HERPUD1-214ENST00000568651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.82□□□□□ -0.52
HERPUD1-214ENST00000568651 MCM6Q14566 821 aa11.82□□□□□ -0.52
HERPUD1-214ENST00000568651 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
HERPUD1-214ENST00000568651 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
HERPUD1-214ENST00000568651 FAM161AQ3B820 660 aa11.81□□□□□ -0.52
HERPUD1-214ENST00000568651 ARSIQ5FYB1 569 aa11.81□□□□□ -0.52
HERPUD1-214ENST00000568651 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
HERPUD1-214ENST00000568651 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
HERPUD1-214ENST00000568651 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
HERPUD1-214ENST00000568651 BCL2L12Q9HB09 334 aa11.79□□□□□ -0.52
HERPUD1-214ENST00000568651 UBTFP17480 764 aaKnown RBP11.78□□□□□ -0.52
HERPUD1-214ENST00000568651 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.53
HERPUD1-214ENST00000568651 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
HERPUD1-214ENST00000568651 PPP1R3GB7ZBB8 358 aa11.75□□□□□ -0.53
HERPUD1-214ENST00000568651 TUSC1Q2TAM9 212 aa11.75□□□□□ -0.53
HERPUD1-214ENST00000568651 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
HERPUD1-214ENST00000568651 KHSRPQ92945 711 aaKnown RBP eCLIP11.75□□□□□ -0.53
HERPUD1-214ENST00000568651 EYA1Q99502 592 aa11.75□□□□□ -0.53
HERPUD1-214ENST00000568651 C1orf115Q9H7X2 142 aa11.75□□□□□ -0.53
HERPUD1-214ENST00000568651 TRAK2O60296 914 aa11.74□□□□□ -0.53
HERPUD1-214ENST00000568651 POTEJP0CG39 1038 aa11.74□□□□□ -0.53
HERPUD1-214ENST00000568651 SULF1Q8IWU6 871 aa11.74□□□□□ -0.53
HERPUD1-214ENST00000568651 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
HERPUD1-214ENST00000568651 NLRP7Q8WX94 980 aa11.74□□□□□ -0.53
HERPUD1-214ENST00000568651 TBC1D2Q9BYX2 928 aa11.74□□□□□ -0.53
HERPUD1-214ENST00000568651 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
HERPUD1-214ENST00000568651 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
HERPUD1-214ENST00000568651 PROCA1Q8NCQ7 364 aaPredicted RBP11.73□□□□□ -0.53
HERPUD1-214ENST00000568651 POLR3EQ9NVU0 708 aa11.73□□□□□ -0.53
HERPUD1-214ENST00000568651 LHX6Q9UPM6 363 aa11.73□□□□□ -0.53
HERPUD1-214ENST00000568651 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
HERPUD1-214ENST00000568651 PTPREP23469 700 aa11.72□□□□□ -0.53
HERPUD1-214ENST00000568651 NESP48681 1621 aa11.71□□□□□ -0.53
HERPUD1-214ENST00000568651 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
HERPUD1-214ENST00000568651 APBB1O00213 710 aa11.71□□□□□ -0.53
HERPUD1-214ENST00000568651 CD46P15529 392 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms