RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 BCORL1Q5H9F3 1711 aa22.21■■□□□ 1.15
KLHDC4-223ENST00000568499 SIGLEC1Q9BZZ2 1709 aa22.2■■□□□ 1.14
KLHDC4-223ENST00000568499 WASHC2CQ9Y4E1 1318 aa22.2■■□□□ 1.14
KLHDC4-223ENST00000568499 GCC2Q8IWJ2 1684 aa22.2■■□□□ 1.14
KLHDC4-223ENST00000568499 CNTLNQ9NXG0 1405 aa22.18■■□□□ 1.14
KLHDC4-223ENST00000568499 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
KLHDC4-223ENST00000568499 TRIM52Q96A61 297 aa22.16■■□□□ 1.14
KLHDC4-223ENST00000568499 FAM135AQ9P2D6 1515 aa22.16■■□□□ 1.14
KLHDC4-223ENST00000568499 HRCP23327 699 aa22.14■■□□□ 1.13
KLHDC4-223ENST00000568499 NUP155O75694 1391 aa22.13■■□□□ 1.13
KLHDC4-223ENST00000568499 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
KLHDC4-223ENST00000568499 ADAMTSL3P82987 1691 aa22.12■■□□□ 1.13
KLHDC4-223ENST00000568499 KDM4FA0A1W2PPD8 638 aa22.12■■□□□ 1.13
KLHDC4-223ENST00000568499 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
KLHDC4-223ENST00000568499 PRDM15P57071 1507 aaPredicted RBP22.11■■□□□ 1.13
KLHDC4-223ENST00000568499 KDM5DQ9BY66 1539 aa22.11■■□□□ 1.13
KLHDC4-223ENST00000568499 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
KLHDC4-223ENST00000568499 UNC13BO14795 1591 aa22.09■■□□□ 1.13
KLHDC4-223ENST00000568499 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
KLHDC4-223ENST00000568499 FER1L4A9Z1Z3 1794 aa22.08■■□□□ 1.13
KLHDC4-223ENST00000568499 MROH1Q8NDA8 1641 aa22.08■■□□□ 1.13
KLHDC4-223ENST00000568499 ZMYM3Q14202 1370 aa22.07■■□□□ 1.12
KLHDC4-223ENST00000568499 ABCC3O15438 1527 aa22.06■■□□□ 1.12
KLHDC4-223ENST00000568499 ZC3H13Q5T200 1668 aaKnown RBP22.06■■□□□ 1.12
KLHDC4-223ENST00000568499 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
KLHDC4-223ENST00000568499 CLTCQ00610 1675 aaKnown RBP22.04■■□□□ 1.12
KLHDC4-223ENST00000568499 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
KLHDC4-223ENST00000568499 LMTK2Q8IWU2 1503 aa22.03■■□□□ 1.12
KLHDC4-223ENST00000568499 SLC4A1APQ9BWU0 796 aaKnown RBP22.03■■□□□ 1.12
KLHDC4-223ENST00000568499 RIMS1Q86UR5 1692 aaKnown RBP22.03■■□□□ 1.12
KLHDC4-223ENST00000568499 PTPRMP28827 1452 aa22.03■■□□□ 1.12
KLHDC4-223ENST00000568499 MROH2AA6NES4 1674 aa22.01■■□□□ 1.11
KLHDC4-223ENST00000568499 IQGAP3Q86VI3 1631 aa22.01■■□□□ 1.11
KLHDC4-223ENST00000568499 ARHGAP31Q2M1Z3 1444 aa21.99■■□□□ 1.11
KLHDC4-223ENST00000568499 CEBPAP49715 358 aaPredicted RBP21.99■■□□□ 1.11
KLHDC4-223ENST00000568499 MPHOSPH9Q99550 1183 aa21.98■■□□□ 1.11
KLHDC4-223ENST00000568499 CEP152O94986 1710 aa21.97■■□□□ 1.11
KLHDC4-223ENST00000568499 PZPP20742 1482 aa21.97■■□□□ 1.11
KLHDC4-223ENST00000568499 CAMSAP1Q5T5Y3 1602 aa21.96■■□□□ 1.11
KLHDC4-223ENST00000568499 TET3O43151 1660 aa21.96■■□□□ 1.11
KLHDC4-223ENST00000568499 RPRD2Q5VT52 1461 aaKnown RBP21.96■■□□□ 1.11
KLHDC4-223ENST00000568499 PKD2Q13563 968 aa21.95■■□□□ 1.1
KLHDC4-223ENST00000568499 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
KLHDC4-223ENST00000568499 EFCAB6Q5THR3 1501 aa21.95■■□□□ 1.1
KLHDC4-223ENST00000568499 NPATQ14207 1427 aa21.94■■□□□ 1.1
KLHDC4-223ENST00000568499 C3P01024 1663 aa21.92■■□□□ 1.1
KLHDC4-223ENST00000568499 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
KLHDC4-223ENST00000568499 TNRQ92752 1358 aa21.89■■□□□ 1.1
KLHDC4-223ENST00000568499 ERVK-7P63135 1459 aa21.88■■□□□ 1.09
KLHDC4-223ENST00000568499 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
KLHDC4-223ENST00000568499 SPATA31D1Q6ZQQ2 1576 aa21.85■■□□□ 1.09
KLHDC4-223ENST00000568499 E9PCH4 1651 aa21.85■■□□□ 1.09
KLHDC4-223ENST00000568499 NOS1P29475 1434 aa21.84■■□□□ 1.09
KLHDC4-223ENST00000568499 PREX1Q8TCU6 1659 aa21.82■■□□□ 1.08
KLHDC4-223ENST00000568499 UHRF1BP1Q6BDS2 1440 aa21.82■■□□□ 1.08
KLHDC4-223ENST00000568499 FOXD1Q16676 465 aa21.82■■□□□ 1.08
KLHDC4-223ENST00000568499 SETD1BQ9UPS6 1966 aaKnown RBP21.81■■□□□ 1.08
KLHDC4-223ENST00000568499 NLRP1Q9C000 1473 aa21.81■■□□□ 1.08
KLHDC4-223ENST00000568499 PTPRTO14522 1441 aa21.8■■□□□ 1.08
KLHDC4-223ENST00000568499 STAG3Q9UJ98 1225 aa21.8■■□□□ 1.08
KLHDC4-223ENST00000568499 CFAP65Q6ZU64 1925 aaKnown RBP21.78■■□□□ 1.08
KLHDC4-223ENST00000568499 IDI1Q13907 227 aa21.77■■□□□ 1.08
KLHDC4-223ENST00000568499 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
KLHDC4-223ENST00000568499 CCDC144AA2RUR9 1427 aa21.75■■□□□ 1.07
KLHDC4-223ENST00000568499 TRPM2O94759 1503 aa21.75■■□□□ 1.07
KLHDC4-223ENST00000568499 SPHKAPQ2M3C7 1700 aa21.75■■□□□ 1.07
KLHDC4-223ENST00000568499 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
KLHDC4-223ENST00000568499 THEMISQ8N1K5 641 aaPredicted RBP21.74■■□□□ 1.07
KLHDC4-223ENST00000568499 SYNMO15061 1565 aa21.74■■□□□ 1.07
KLHDC4-223ENST00000568499 A2ML1A8K2U0 1454 aa21.73■■□□□ 1.07
KLHDC4-223ENST00000568499 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
KLHDC4-223ENST00000568499 MYO3AQ8NEV4 1616 aa21.72■■□□□ 1.07
KLHDC4-223ENST00000568499 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
KLHDC4-223ENST00000568499 CEP170BQ9Y4F5 1589 aaPredicted RBP21.7■■□□□ 1.06
KLHDC4-223ENST00000568499 UGGT1Q9NYU2 1555 aa21.69■■□□□ 1.06
KLHDC4-223ENST00000568499 HDGFP51858 240 aaKnown RBP21.68■■□□□ 1.06
KLHDC4-223ENST00000568499 CCER1Q8TC90 406 aaPredicted RBP21.67■■□□□ 1.06
KLHDC4-223ENST00000568499 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
KLHDC4-223ENST00000568499 LMTK3Q96Q04 1460 aa21.65■■□□□ 1.06
KLHDC4-223ENST00000568499 ZNF326Q5BKZ1 582 aaKnown RBP21.65■■□□□ 1.06
KLHDC4-223ENST00000568499 ZNF142P52746 1687 aaPredicted RBP21.65■■□□□ 1.06
KLHDC4-223ENST00000568499 EID1Q9Y6B2 187 aa21.64■■□□□ 1.05
KLHDC4-223ENST00000568499 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
KLHDC4-223ENST00000568499 ADGRB3O60242 1522 aa21.64■■□□□ 1.05
KLHDC4-223ENST00000568499 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
KLHDC4-223ENST00000568499 KDM5AP29375 1690 aaKnown RBP21.62■■□□□ 1.05
KLHDC4-223ENST00000568499 HSPA2P54652 639 aa21.61■■□□□ 1.05
KLHDC4-223ENST00000568499 ANKLE2Q86XL3 938 aa21.61■■□□□ 1.05
KLHDC4-223ENST00000568499 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.61■■□□□ 1.05
KLHDC4-223ENST00000568499 TMEM2Q9UHN6 1383 aa21.6■■□□□ 1.05
KLHDC4-223ENST00000568499 RPGRIP1LQ68CZ1 1315 aa21.59■■□□□ 1.05
KLHDC4-223ENST00000568499 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
KLHDC4-223ENST00000568499 RGL3Q3MIN7 710 aa21.59■■□□□ 1.05
KLHDC4-223ENST00000568499 UBR1Q8IWV7 1749 aa21.59■■□□□ 1.05
KLHDC4-223ENST00000568499 KIF1BO60333 1816 aa21.59■■□□□ 1.05
KLHDC4-223ENST00000568499 TMEM131LA2VDJ0 1609 aa21.58■■□□□ 1.05
KLHDC4-223ENST00000568499 PPP1R15AO75807 674 aaPredicted RBP21.57■■□□□ 1.04
KLHDC4-223ENST00000568499 TXNDC2Q86VQ3 553 aa21.57■■□□□ 1.04
KLHDC4-223ENST00000568499 SIN3AQ96ST3 1273 aa21.56■■□□□ 1.04
KLHDC4-223ENST00000568499 RIMS2Q9UQ26 1411 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms