RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 PLXNC1O60486 1568 aa20.52■□□□□ 0.88
PKM-220ENST00000568459 ARHGEF5Q12774 1597 aa20.52■□□□□ 0.88
PKM-220ENST00000568459 C3P01024 1663 aa20.51■□□□□ 0.87
PKM-220ENST00000568459 GGT6Q6P531 493 aa20.5■□□□□ 0.87
PKM-220ENST00000568459 PREX1Q8TCU6 1659 aa20.48■□□□□ 0.87
PKM-220ENST00000568459 DHX29Q7Z478 1369 aaKnown RBP20.48■□□□□ 0.87
PKM-220ENST00000568459 HSPA2P54652 639 aa20.48■□□□□ 0.87
PKM-220ENST00000568459 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
PKM-220ENST00000568459 MROH2AA6NES4 1674 aa20.46■□□□□ 0.87
PKM-220ENST00000568459 ZMYM3Q14202 1370 aa20.44■□□□□ 0.86
PKM-220ENST00000568459 CLTCQ00610 1675 aaKnown RBP20.44■□□□□ 0.86
PKM-220ENST00000568459 KIF3BO15066 747 aa20.43■□□□□ 0.86
PKM-220ENST00000568459 UHRF1BP1Q6BDS2 1440 aa20.43■□□□□ 0.86
PKM-220ENST00000568459 CCER2I3L3R5 266 aa20.43■□□□□ 0.86
PKM-220ENST00000568459 PTPN23Q9H3S7 1636 aa20.41■□□□□ 0.86
PKM-220ENST00000568459 MAST1Q9Y2H9 1570 aa20.41■□□□□ 0.86
PKM-220ENST00000568459 PPP1R15AO75807 674 aaPredicted RBP20.4■□□□□ 0.86
PKM-220ENST00000568459 ITGAEP38570 1179 aa20.39■□□□□ 0.85
PKM-220ENST00000568459 TSHZ2Q9NRE2 1034 aa20.38■□□□□ 0.85
PKM-220ENST00000568459 FGD6Q6ZV73 1430 aa20.38■□□□□ 0.85
PKM-220ENST00000568459 NPATQ14207 1427 aa20.37■□□□□ 0.85
PKM-220ENST00000568459 WASHC2CQ9Y4E1 1318 aa20.34■□□□□ 0.85
PKM-220ENST00000568459 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.85
PKM-220ENST00000568459 ABCC5O15440 1437 aa20.33■□□□□ 0.84
PKM-220ENST00000568459 CROCC2H7BZ55 1655 aa20.33■□□□□ 0.84
PKM-220ENST00000568459 HFM1A2PYH4 1435 aa20.31■□□□□ 0.84
PKM-220ENST00000568459 FAM50AQ14320 339 aaKnown RBP20.31■□□□□ 0.84
PKM-220ENST00000568459 PTPRKQ15262 1439 aa20.31■□□□□ 0.84
PKM-220ENST00000568459 FAM135AQ9P2D6 1515 aa20.31■□□□□ 0.84
PKM-220ENST00000568459 SHANK2Q9UPX8 1470 aa20.31■□□□□ 0.84
PKM-220ENST00000568459 DNMT1P26358 1616 aaKnown RBP20.3■□□□□ 0.84
PKM-220ENST00000568459 DAPK1P53355 1430 aa20.3■□□□□ 0.84
PKM-220ENST00000568459 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
PKM-220ENST00000568459 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
PKM-220ENST00000568459 DUOX2Q9NRD8 1548 aa20.3■□□□□ 0.84
PKM-220ENST00000568459 EIF2AK4Q9P2K8 1649 aaKnown RBP20.29■□□□□ 0.84
PKM-220ENST00000568459 RRP7BPQ9NSQ0 103 aa20.29■□□□□ 0.84
PKM-220ENST00000568459 STRCQ7RTU9 1775 aa20.28■□□□□ 0.84
PKM-220ENST00000568459 SIN3AQ96ST3 1273 aa20.28■□□□□ 0.84
PKM-220ENST00000568459 KIF15Q9NS87 1388 aa20.28■□□□□ 0.84
PKM-220ENST00000568459 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
PKM-220ENST00000568459 RNF17Q9BXT8 1623 aaKnown RBP20.27■□□□□ 0.84
PKM-220ENST00000568459 ILDR1Q86SU0 546 aaPredicted RBP20.27■□□□□ 0.84
PKM-220ENST00000568459 CHIC2Q9UKJ5 165 aa20.27■□□□□ 0.84
PKM-220ENST00000568459 ANP32CO43423 234 aa20.25■□□□□ 0.83
PKM-220ENST00000568459 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
PKM-220ENST00000568459 MYO3AQ8NEV4 1616 aa20.24■□□□□ 0.83
PKM-220ENST00000568459 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
PKM-220ENST00000568459 PZPP20742 1482 aa20.23■□□□□ 0.83
PKM-220ENST00000568459 ZNF142P52746 1687 aaPredicted RBP20.22■□□□□ 0.83
PKM-220ENST00000568459 ERBINQ96RT1 1412 aa20.22■□□□□ 0.83
PKM-220ENST00000568459 ZC3H13Q5T200 1668 aaKnown RBP20.21■□□□□ 0.83
PKM-220ENST00000568459 ANP32EQ9BTT0 268 aa20.21■□□□□ 0.83
PKM-220ENST00000568459 CAMSAP1Q5T5Y3 1602 aa20.21■□□□□ 0.83
PKM-220ENST00000568459 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
PKM-220ENST00000568459 TNRQ92752 1358 aa20.21■□□□□ 0.83
PKM-220ENST00000568459 TONSLQ96HA7 1378 aa20.21■□□□□ 0.83
PKM-220ENST00000568459 CFAP65Q6ZU64 1925 aaKnown RBP20.2■□□□□ 0.82
PKM-220ENST00000568459 NCOA1Q15788 1441 aa20.2■□□□□ 0.82
PKM-220ENST00000568459 ABCC3O15438 1527 aa20.19■□□□□ 0.82
PKM-220ENST00000568459 NEFLP07196 543 aa20.18■□□□□ 0.82
PKM-220ENST00000568459 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
PKM-220ENST00000568459 PTPRTO14522 1441 aa20.18■□□□□ 0.82
PKM-220ENST00000568459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.823e-16■□□□□ 9.7
PKM-220ENST00000568459 A2ML1A8K2U0 1454 aa20.18■□□□□ 0.82
PKM-220ENST00000568459 CEP152O94986 1710 aa20.17■□□□□ 0.82
PKM-220ENST00000568459 NAIPQ13075 1403 aa20.16■□□□□ 0.82
PKM-220ENST00000568459 FKBP8Q14318 412 aa20.16■□□□□ 0.82
PKM-220ENST00000568459 FBXO41Q8TF61 875 aa20.16■□□□□ 0.82
PKM-220ENST00000568459 ADGRL2O95490 1459 aa20.15■□□□□ 0.82
PKM-220ENST00000568459 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
PKM-220ENST00000568459 KANK1Q14678 1352 aa20.15■□□□□ 0.82
PKM-220ENST00000568459 PKD2Q13563 968 aa20.14■□□□□ 0.81
PKM-220ENST00000568459 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
PKM-220ENST00000568459 PRDM15P57071 1507 aaPredicted RBP20.13■□□□□ 0.81
PKM-220ENST00000568459 CERKQ8TCT0 537 aa20.13■□□□□ 0.81
PKM-220ENST00000568459 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
PKM-220ENST00000568459 NLRP1Q9C000 1473 aa20.12■□□□□ 0.81
PKM-220ENST00000568459 THEMISQ8N1K5 641 aaPredicted RBP20.1■□□□□ 0.81
PKM-220ENST00000568459 GCC2Q8IWJ2 1684 aa20.1■□□□□ 0.81
PKM-220ENST00000568459 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
PKM-220ENST00000568459 ERVK-7P63135 1459 aa20.09■□□□□ 0.81
PKM-220ENST00000568459 ARHGAP31Q2M1Z3 1444 aa20.08■□□□□ 0.8
PKM-220ENST00000568459 ANKRD50Q9ULJ7 1429 aa20.08■□□□□ 0.8
PKM-220ENST00000568459 UGGT1Q9NYU2 1555 aa20.07■□□□□ 0.8
PKM-220ENST00000568459 ERICH6BQ5W0A0 696 aa20.06■□□□□ 0.8
PKM-220ENST00000568459 ANKLE2Q86XL3 938 aa20.05■□□□□ 0.8
PKM-220ENST00000568459 ROCK1Q13464 1354 aa20.04■□□□□ 0.8
PKM-220ENST00000568459 POLR1AO95602 1720 aaPredicted RBP20.04■□□□□ 0.8
PKM-220ENST00000568459 VWDEQ8N2E2 1590 aa20.03■□□□□ 0.8
PKM-220ENST00000568459 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.8
PKM-220ENST00000568459 LTBP4Q8N2S1 1624 aa19.99■□□□□ 0.79
PKM-220ENST00000568459 RBM19Q9Y4C8 960 aaKnown RBP19.97■□□□□ 0.79
PKM-220ENST00000568459 UBR1Q8IWV7 1749 aa19.97■□□□□ 0.79
PKM-220ENST00000568459 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
PKM-220ENST00000568459 BCANQ96GW7 911 aa19.97■□□□□ 0.79
PKM-220ENST00000568459 EFCAB6Q5THR3 1501 aa19.96■□□□□ 0.79
PKM-220ENST00000568459 TRIM52Q96A61 297 aa19.96■□□□□ 0.79
PKM-220ENST00000568459 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
PKM-220ENST00000568459 NEURL4Q96JN8 1562 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms