RNA–Protein interactions for RNA: ENST00000568309.5

SIN3A-210, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-210ENST00000568309 FMN1Q68DA7 1419 aa13.44□□□□□ -0.26
SIN3A-210ENST00000568309 INO80Q9ULG1 1556 aaPredicted RBP13.42□□□□□ -0.26
SIN3A-210ENST00000568309 SYCP2Q9BX26 1530 aa13.41□□□□□ -0.26
SIN3A-210ENST00000568309 FAM135AQ9P2D6 1515 aa13.41□□□□□ -0.26
SIN3A-210ENST00000568309 FBXO31Q5XUX0 539 aaPredicted RBP13.41□□□□□ -0.26
SIN3A-210ENST00000568309 CDC42BPAQ5VT25 1732 aa13.41□□□□□ -0.26
SIN3A-210ENST00000568309 PZPP20742 1482 aa13.41□□□□□ -0.26
SIN3A-210ENST00000568309 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
SIN3A-210ENST00000568309 UGGT1Q9NYU2 1555 aa13.41□□□□□ -0.26
SIN3A-210ENST00000568309 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
SIN3A-210ENST00000568309 LRRIQ1Q96JM4 1722 aa13.39□□□□□ -0.27
SIN3A-210ENST00000568309 ADGBQ8N7X0 1667 aa13.38□□□□□ -0.27
SIN3A-210ENST00000568309 MIA2Q96PC5 1412 aa13.38□□□□□ -0.27
SIN3A-210ENST00000568309 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
SIN3A-210ENST00000568309 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
SIN3A-210ENST00000568309 KIAA1107Q9UPP5 1409 aa13.36□□□□□ -0.27
SIN3A-210ENST00000568309 SRCAPQ6ZRS2 3230 aa13.35□□□□□ -0.27
SIN3A-210ENST00000568309 ROBO1Q9Y6N7 1651 aa13.35□□□□□ -0.27
SIN3A-210ENST00000568309 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-210ENST00000568309 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
SIN3A-210ENST00000568309 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
SIN3A-210ENST00000568309 JCADQ9P266 1359 aa13.32□□□□□ -0.28
SIN3A-210ENST00000568309 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
SIN3A-210ENST00000568309 ZNF772Q68DY9 489 aaPredicted RBP13.32□□□□□ -0.28
SIN3A-210ENST00000568309 EEA1Q15075 1411 aa13.31□□□□□ -0.28
SIN3A-210ENST00000568309 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
SIN3A-210ENST00000568309 LRRC9Q6ZRR7 1453 aa13.3□□□□□ -0.28
SIN3A-210ENST00000568309 CDK12Q9NYV4 1490 aaPredicted RBP13.3□□□□□ -0.28
SIN3A-210ENST00000568309 GPATCH8Q9UKJ3 1502 aaKnown RBP13.3□□□□□ -0.28
SIN3A-210ENST00000568309 DHX29Q7Z478 1369 aaKnown RBP13.29□□□□□ -0.28
SIN3A-210ENST00000568309 CCDC18Q5T9S5 1454 aa13.29□□□□□ -0.28
SIN3A-210ENST00000568309 PHLPP1O60346 1717 aa13.28□□□□□ -0.28
SIN3A-210ENST00000568309 SCAF11Q99590 1463 aaKnown RBP13.28□□□□□ -0.28
SIN3A-210ENST00000568309 LRP6O75581 1613 aa13.28□□□□□ -0.28
SIN3A-210ENST00000568309 RXRBP28702 533 aa13.27□□□□□ -0.29
SIN3A-210ENST00000568309 WASHC2CQ9Y4E1 1318 aa13.27□□□□□ -0.29
SIN3A-210ENST00000568309 TMEM94Q12767 1356 aa13.27□□□□□ -0.29
SIN3A-210ENST00000568309 RTEL1-TNFRSF6BF6WH68 1400 aa13.26□□□□□ -0.29
SIN3A-210ENST00000568309 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
SIN3A-210ENST00000568309 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
SIN3A-210ENST00000568309 KIF3BO15066 747 aa13.25□□□□□ -0.29
SIN3A-210ENST00000568309 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
SIN3A-210ENST00000568309 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
SIN3A-210ENST00000568309 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
SIN3A-210ENST00000568309 UBR1Q8IWV7 1749 aa13.23□□□□□ -0.29
SIN3A-210ENST00000568309 MEX3CQ5U5Q3 659 aaKnown RBP13.23□□□□□ -0.29
SIN3A-210ENST00000568309 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
SIN3A-210ENST00000568309 LTKP29376 864 aa13.22□□□□□ -0.29
SIN3A-210ENST00000568309 SLIT1O75093 1534 aa13.22□□□□□ -0.29
SIN3A-210ENST00000568309 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
SIN3A-210ENST00000568309 NCOA2Q15596 1464 aa13.21□□□□□ -0.3
SIN3A-210ENST00000568309 TXNDC2Q86VQ3 553 aa13.2□□□□□ -0.3
SIN3A-210ENST00000568309 ERVK-7P63135 1459 aa13.2□□□□□ -0.3
SIN3A-210ENST00000568309 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
SIN3A-210ENST00000568309 KCNA6P17658 529 aa13.19□□□□□ -0.3
SIN3A-210ENST00000568309 FOXD1Q16676 465 aa13.19□□□□□ -0.3
SIN3A-210ENST00000568309 SLAIN2Q9P270 581 aa13.19□□□□□ -0.3
SIN3A-210ENST00000568309 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-210ENST00000568309 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-210ENST00000568309 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
SIN3A-210ENST00000568309 TIAM1Q13009 1591 aa13.18□□□□□ -0.3
SIN3A-210ENST00000568309 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
SIN3A-210ENST00000568309 SHPRHQ149N8 1683 aa13.18□□□□□ -0.3
SIN3A-210ENST00000568309 RGS12O14924 1447 aa13.17□□□□□ -0.3
SIN3A-210ENST00000568309 MSH6P52701 1360 aa13.17□□□□□ -0.3
SIN3A-210ENST00000568309 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
SIN3A-210ENST00000568309 ABCC3O15438 1527 aa13.16□□□□□ -0.3
SIN3A-210ENST00000568309 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
SIN3A-210ENST00000568309 UBTFP17480 764 aaKnown RBP13.15□□□□□ -0.3
SIN3A-210ENST00000568309 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
SIN3A-210ENST00000568309 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
SIN3A-210ENST00000568309 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
SIN3A-210ENST00000568309 NWD1Q149M9 1564 aa13.14□□□□□ -0.31
SIN3A-210ENST00000568309 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
SIN3A-210ENST00000568309 AFF2P51816 1311 aa13.13□□□□□ -0.31
SIN3A-210ENST00000568309 NUTM2BA6NNL0 878 aaPredicted RBP13.12□□□□□ -0.31
SIN3A-210ENST00000568309 NUTM2EB1AL46 878 aaPredicted RBP13.12□□□□□ -0.31
SIN3A-210ENST00000568309 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
SIN3A-210ENST00000568309 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
SIN3A-210ENST00000568309 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
SIN3A-210ENST00000568309 FYCO1Q9BQS8 1478 aa13.11□□□□□ -0.31
SIN3A-210ENST00000568309 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
SIN3A-210ENST00000568309 TMEM2Q9UHN6 1383 aa13.11□□□□□ -0.31
SIN3A-210ENST00000568309 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
SIN3A-210ENST00000568309 TET3O43151 1660 aa13.11□□□□□ -0.31
SIN3A-210ENST00000568309 KDM5AP29375 1690 aaKnown RBP13.1□□□□□ -0.31
SIN3A-210ENST00000568309 CCDC141Q6ZP82 1450 aa13.1□□□□□ -0.31
SIN3A-210ENST00000568309 CHIC1Q5VXU3 224 aa13.09□□□□□ -0.31
SIN3A-210ENST00000568309 DIP2AQ14689 1571 aa13.08□□□□□ -0.32
SIN3A-210ENST00000568309 CFAP65Q6ZU64 1925 aaKnown RBP13.08□□□□□ -0.32
SIN3A-210ENST00000568309 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
SIN3A-210ENST00000568309 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
SIN3A-210ENST00000568309 QTRT2Q9H974 415 aaKnown RBP13.06□□□□□ -0.32
SIN3A-210ENST00000568309 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
SIN3A-210ENST00000568309 RSPH4AQ5TD94 716 aa13.05□□□□□ -0.32
SIN3A-210ENST00000568309 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
SIN3A-210ENST00000568309 CEP152O94986 1710 aa13.05□□□□□ -0.32
SIN3A-210ENST00000568309 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
SIN3A-210ENST00000568309 LRP5O75197 1615 aa13.03□□□□□ -0.32
SIN3A-210ENST00000568309 EIF2AK4Q9P2K8 1649 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms