RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 NCOA1Q15788 1441 aa19.86■□□□□ 0.77
CNOT1-213ENST00000568158 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
CNOT1-213ENST00000568158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.84■□□□□ 0.773e-6■□□□□ 9.8
CNOT1-213ENST00000568158 DUOX2Q9NRD8 1548 aa19.84■□□□□ 0.77
CNOT1-213ENST00000568158 ZMYM3Q14202 1370 aa19.83■□□□□ 0.77
CNOT1-213ENST00000568158 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.76
CNOT1-213ENST00000568158 WASHC2CQ9Y4E1 1318 aa19.81■□□□□ 0.76
CNOT1-213ENST00000568158 CNTLNQ9NXG0 1405 aa19.81■□□□□ 0.76
CNOT1-213ENST00000568158 ADGRL2O95490 1459 aa19.8■□□□□ 0.76
CNOT1-213ENST00000568158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.764e-8■□□□□ 10
CNOT1-213ENST00000568158 CLTCQ00610 1675 aaKnown RBP19.8■□□□□ 0.76
CNOT1-213ENST00000568158 C3P01024 1663 aa19.79■□□□□ 0.76
CNOT1-213ENST00000568158 ERBINQ96RT1 1412 aa19.76■□□□□ 0.75
CNOT1-213ENST00000568158 FBXO31Q5XUX0 539 aaPredicted RBP19.75■□□□□ 0.75
CNOT1-213ENST00000568158 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
CNOT1-213ENST00000568158 SETD1BQ9UPS6 1966 aaKnown RBP19.75■□□□□ 0.75
CNOT1-213ENST00000568158 ROCK1Q13464 1354 aa19.74■□□□□ 0.75
CNOT1-213ENST00000568158 MROH2AA6NES4 1674 aa19.73■□□□□ 0.75
CNOT1-213ENST00000568158 HSPA2P54652 639 aa19.73■□□□□ 0.75
CNOT1-213ENST00000568158 ANKRD50Q9ULJ7 1429 aa19.73■□□□□ 0.75
CNOT1-213ENST00000568158 RNF17Q9BXT8 1623 aaKnown RBP19.73■□□□□ 0.75
CNOT1-213ENST00000568158 MROH1Q8NDA8 1641 aa19.71■□□□□ 0.75
CNOT1-213ENST00000568158 KDM5DQ9BY66 1539 aa19.7■□□□□ 0.74
CNOT1-213ENST00000568158 LMTK3Q96Q04 1460 aa19.68■□□□□ 0.74
CNOT1-213ENST00000568158 CFAP65Q6ZU64 1925 aaKnown RBP19.68■□□□□ 0.74
CNOT1-213ENST00000568158 ABCC3O15438 1527 aa19.67■□□□□ 0.74
CNOT1-213ENST00000568158 KANK1Q14678 1352 aa19.67■□□□□ 0.74
CNOT1-213ENST00000568158 CEP152O94986 1710 aa19.66■□□□□ 0.74
CNOT1-213ENST00000568158 NPATQ14207 1427 aa19.66■□□□□ 0.74
CNOT1-213ENST00000568158 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
CNOT1-213ENST00000568158 UHRF1BP1Q6BDS2 1440 aa19.64■□□□□ 0.73
CNOT1-213ENST00000568158 DEPDC5O75140 1603 aa19.64■□□□□ 0.73
CNOT1-213ENST00000568158 PREX1Q8TCU6 1659 aa19.64■□□□□ 0.73
CNOT1-213ENST00000568158 PZPP20742 1482 aa19.63■□□□□ 0.73
CNOT1-213ENST00000568158 PRDM15P57071 1507 aaPredicted RBP19.62■□□□□ 0.73
CNOT1-213ENST00000568158 NAIPQ13075 1403 aa19.6■□□□□ 0.73
CNOT1-213ENST00000568158 TNRQ92752 1358 aa19.6■□□□□ 0.73
CNOT1-213ENST00000568158 ZC3H13Q5T200 1668 aaKnown RBP19.6■□□□□ 0.73
CNOT1-213ENST00000568158 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
CNOT1-213ENST00000568158 VWDEQ8N2E2 1590 aa19.59■□□□□ 0.73
CNOT1-213ENST00000568158 NUP155O75694 1391 aa19.57■□□□□ 0.72
CNOT1-213ENST00000568158 ARHGAP31Q2M1Z3 1444 aa19.57■□□□□ 0.72
CNOT1-213ENST00000568158 ADRA2BP18089 450 aa19.56■□□□□ 0.72
CNOT1-213ENST00000568158 LMTK2Q8IWU2 1503 aa19.56■□□□□ 0.72
CNOT1-213ENST00000568158 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
CNOT1-213ENST00000568158 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
CNOT1-213ENST00000568158 TRIM52Q96A61 297 aa19.54■□□□□ 0.72
CNOT1-213ENST00000568158 UNC13BO14795 1591 aa19.53■□□□□ 0.72
CNOT1-213ENST00000568158 MYO3AQ8NEV4 1616 aa19.52■□□□□ 0.72
CNOT1-213ENST00000568158 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.71
CNOT1-213ENST00000568158 A2ML1A8K2U0 1454 aa19.51■□□□□ 0.71
CNOT1-213ENST00000568158 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
CNOT1-213ENST00000568158 GCC2Q8IWJ2 1684 aa19.5■□□□□ 0.71
CNOT1-213ENST00000568158 CEP170BQ9Y4F5 1589 aaPredicted RBP19.5■□□□□ 0.71
CNOT1-213ENST00000568158 IDI1Q13907 227 aa19.49■□□□□ 0.71
CNOT1-213ENST00000568158 EFCAB6Q5THR3 1501 aa19.48■□□□□ 0.71
CNOT1-213ENST00000568158 THEMISQ8N1K5 641 aaPredicted RBP19.48■□□□□ 0.71
CNOT1-213ENST00000568158 NLRP1Q9C000 1473 aa19.48■□□□□ 0.71
CNOT1-213ENST00000568158 STRCQ7RTU9 1775 aa19.47■□□□□ 0.71
CNOT1-213ENST00000568158 TET3O43151 1660 aa19.47■□□□□ 0.71
CNOT1-213ENST00000568158 IQGAP3Q86VI3 1631 aa19.47■□□□□ 0.71
CNOT1-213ENST00000568158 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
CNOT1-213ENST00000568158 NOS1P29475 1434 aa19.45■□□□□ 0.7
CNOT1-213ENST00000568158 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
CNOT1-213ENST00000568158 UGGT1Q9NYU2 1555 aa19.44■□□□□ 0.7
CNOT1-213ENST00000568158 E9PCH4 1651 aa19.43■□□□□ 0.7
CNOT1-213ENST00000568158 STAG3Q9UJ98 1225 aa19.43■□□□□ 0.7
CNOT1-213ENST00000568158 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
CNOT1-213ENST00000568158 SYNMO15061 1565 aa19.42■□□□□ 0.7
CNOT1-213ENST00000568158 SLC4A1APQ9BWU0 796 aaKnown RBP19.42■□□□□ 0.7
CNOT1-213ENST00000568158 SLC52A1Q9NWF4 448 aa19.42■□□□□ 0.7
CNOT1-213ENST00000568158 RPRD2Q5VT52 1461 aaKnown RBP19.41■□□□□ 0.7
CNOT1-213ENST00000568158 PKD2Q13563 968 aa19.41■□□□□ 0.7
CNOT1-213ENST00000568158 ANKLE2Q86XL3 938 aa19.41■□□□□ 0.7
CNOT1-213ENST00000568158 PIK3C2BO00750 1634 aa19.38■□□□□ 0.69
CNOT1-213ENST00000568158 CHGAP10645 457 aaKnown RBP19.38■□□□□ 0.69
CNOT1-213ENST00000568158 PLA2R1Q13018 1463 aa19.38■□□□□ 0.69
CNOT1-213ENST00000568158 UBR1Q8IWV7 1749 aa19.37■□□□□ 0.69
CNOT1-213ENST00000568158 RAB3GAP2Q9H2M9 1393 aa19.37■□□□□ 0.69
CNOT1-213ENST00000568158 MPHOSPH9Q99550 1183 aa19.37■□□□□ 0.69
CNOT1-213ENST00000568158 PTPRTO14522 1441 aa19.36■□□□□ 0.69
CNOT1-213ENST00000568158 LTKP29376 864 aa19.36■□□□□ 0.69
CNOT1-213ENST00000568158 TXNDC2Q86VQ3 553 aa19.35■□□□□ 0.69
CNOT1-213ENST00000568158 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
CNOT1-213ENST00000568158 TMEM2Q9UHN6 1383 aa19.31■□□□□ 0.68
CNOT1-213ENST00000568158 ACIN1Q9UKV3 1341 aaKnown RBP19.29■□□□□ 0.68
CNOT1-213ENST00000568158 HRCP23327 699 aa19.29■□□□□ 0.68
CNOT1-213ENST00000568158 MYO5BQ9ULV0 1848 aa19.29■□□□□ 0.68
CNOT1-213ENST00000568158 ARHGAP23Q9P227 1491 aa19.28■□□□□ 0.68
CNOT1-213ENST00000568158 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
CNOT1-213ENST00000568158 POLR1AO95602 1720 aaPredicted RBP19.28■□□□□ 0.68
CNOT1-213ENST00000568158 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.68
CNOT1-213ENST00000568158 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
CNOT1-213ENST00000568158 SLIT1O75093 1534 aa19.27■□□□□ 0.68
CNOT1-213ENST00000568158 NUTM2DQ5VT03 806 aaPredicted RBP19.27■□□□□ 0.68
CNOT1-213ENST00000568158 ADGRB3O60242 1522 aa19.26■□□□□ 0.67
CNOT1-213ENST00000568158 TMEM131LA2VDJ0 1609 aa19.26■□□□□ 0.67
CNOT1-213ENST00000568158 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
CNOT1-213ENST00000568158 KDM5AP29375 1690 aaKnown RBP19.25■□□□□ 0.67
CNOT1-213ENST00000568158 MED14O60244 1454 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms