RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 DMRT2Q9Y5R5 561 aa17.06■□□□□ 0.32
LINC01228-201ENST00000567966 CAMSAP1Q5T5Y3 1602 aa17.06■□□□□ 0.32
LINC01228-201ENST00000567966 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
LINC01228-201ENST00000567966 NCOA1Q15788 1441 aa17.05■□□□□ 0.32
LINC01228-201ENST00000567966 PTPRTO14522 1441 aa17.04■□□□□ 0.32
LINC01228-201ENST00000567966 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
LINC01228-201ENST00000567966 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
LINC01228-201ENST00000567966 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
LINC01228-201ENST00000567966 ZNF142P52746 1687 aaPredicted RBP17.03■□□□□ 0.32
LINC01228-201ENST00000567966 MYOM3Q5VTT5 1437 aa17.03■□□□□ 0.32
LINC01228-201ENST00000567966 MAST1Q9Y2H9 1570 aa17.02■□□□□ 0.31
LINC01228-201ENST00000567966 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.31
LINC01228-201ENST00000567966 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
LINC01228-201ENST00000567966 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
LINC01228-201ENST00000567966 FBXO31Q5XUX0 539 aaPredicted RBP17.01■□□□□ 0.31
LINC01228-201ENST00000567966 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
LINC01228-201ENST00000567966 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
LINC01228-201ENST00000567966 LTBP4Q8N2S1 1624 aa16.97■□□□□ 0.31
LINC01228-201ENST00000567966 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.31
LINC01228-201ENST00000567966 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.31
LINC01228-201ENST00000567966 PZPP20742 1482 aa16.96■□□□□ 0.31
LINC01228-201ENST00000567966 A2ML1A8K2U0 1454 aa16.95■□□□□ 0.3
LINC01228-201ENST00000567966 RNF17Q9BXT8 1623 aaKnown RBP16.95■□□□□ 0.3
LINC01228-201ENST00000567966 PTPN23Q9H3S7 1636 aa16.95■□□□□ 0.3
LINC01228-201ENST00000567966 FAM135AQ9P2D6 1515 aa16.95■□□□□ 0.3
LINC01228-201ENST00000567966 PLA2R1Q13018 1463 aa16.94■□□□□ 0.3
LINC01228-201ENST00000567966 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
LINC01228-201ENST00000567966 TNRQ92752 1358 aa16.94■□□□□ 0.3
LINC01228-201ENST00000567966 MROH1Q8NDA8 1641 aa16.93■□□□□ 0.3
LINC01228-201ENST00000567966 CROCC2H7BZ55 1655 aa16.93■□□□□ 0.3
LINC01228-201ENST00000567966 ABCC5O15440 1437 aa16.93■□□□□ 0.3
LINC01228-201ENST00000567966 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
LINC01228-201ENST00000567966 ABCC3O15438 1527 aa16.91■□□□□ 0.3
LINC01228-201ENST00000567966 PKD2Q13563 968 aa16.91■□□□□ 0.3
LINC01228-201ENST00000567966 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
LINC01228-201ENST00000567966 CEP152O94986 1710 aa16.9■□□□□ 0.3
LINC01228-201ENST00000567966 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
LINC01228-201ENST00000567966 FGD6Q6ZV73 1430 aa16.89■□□□□ 0.29
LINC01228-201ENST00000567966 PPARGC1BQ86YN6 1023 aaKnown RBP16.89■□□□□ 0.29
LINC01228-201ENST00000567966 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
LINC01228-201ENST00000567966 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
LINC01228-201ENST00000567966 DAPK1P53355 1430 aa16.88■□□□□ 0.29
LINC01228-201ENST00000567966 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
LINC01228-201ENST00000567966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.29
LINC01228-201ENST00000567966 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
LINC01228-201ENST00000567966 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
LINC01228-201ENST00000567966 KIF15Q9NS87 1388 aa16.87■□□□□ 0.29
LINC01228-201ENST00000567966 POLR1AO95602 1720 aaPredicted RBP16.87■□□□□ 0.29
LINC01228-201ENST00000567966 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
LINC01228-201ENST00000567966 SPATA31D1Q6ZQQ2 1576 aa16.85■□□□□ 0.29
LINC01228-201ENST00000567966 CHIC2Q9UKJ5 165 aa16.85■□□□□ 0.29
LINC01228-201ENST00000567966 ERVK-7P63135 1459 aa16.84■□□□□ 0.29
LINC01228-201ENST00000567966 NLRP1Q9C000 1473 aa16.84■□□□□ 0.29
LINC01228-201ENST00000567966 UGGT1Q9NYU2 1555 aa16.84■□□□□ 0.29
LINC01228-201ENST00000567966 PRDM15P57071 1507 aaPredicted RBP16.82■□□□□ 0.28
LINC01228-201ENST00000567966 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
LINC01228-201ENST00000567966 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
LINC01228-201ENST00000567966 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
LINC01228-201ENST00000567966 THEMISQ8N1K5 641 aaPredicted RBP16.81■□□□□ 0.28
LINC01228-201ENST00000567966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
LINC01228-201ENST00000567966 ANKLE2Q86XL3 938 aa16.8■□□□□ 0.28
LINC01228-201ENST00000567966 DEPDC5O75140 1603 aa16.8■□□□□ 0.28
LINC01228-201ENST00000567966 RRBP1Q9P2E9 1410 aaKnown RBP16.79■□□□□ 0.28
LINC01228-201ENST00000567966 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.28
LINC01228-201ENST00000567966 UBR1Q8IWV7 1749 aa16.77■□□□□ 0.28
LINC01228-201ENST00000567966 MED14O60244 1454 aa16.76■□□□□ 0.27
LINC01228-201ENST00000567966 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
LINC01228-201ENST00000567966 ARHGAP31Q2M1Z3 1444 aa16.76■□□□□ 0.27
LINC01228-201ENST00000567966 UBAP1LF5GYI3 381 aa16.75■□□□□ 0.27
LINC01228-201ENST00000567966 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
LINC01228-201ENST00000567966 VWDEQ8N2E2 1590 aa16.75■□□□□ 0.27
LINC01228-201ENST00000567966 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
LINC01228-201ENST00000567966 IQGAP1P46940 1657 aa16.74■□□□□ 0.27
LINC01228-201ENST00000567966 PIK3C2BO00750 1634 aa16.72■□□□□ 0.27
LINC01228-201ENST00000567966 KANK1Q14678 1352 aa16.72■□□□□ 0.27
LINC01228-201ENST00000567966 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
LINC01228-201ENST00000567966 LMTK2Q8IWU2 1503 aa16.71■□□□□ 0.27
LINC01228-201ENST00000567966 CPS1P31327 1500 aa16.7■□□□□ 0.26
LINC01228-201ENST00000567966 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
LINC01228-201ENST00000567966 LTKP29376 864 aa16.69■□□□□ 0.26
LINC01228-201ENST00000567966 SYNMO15061 1565 aa16.68■□□□□ 0.26
LINC01228-201ENST00000567966 ARHGAP23Q9P227 1491 aa16.68■□□□□ 0.26
LINC01228-201ENST00000567966 SLIT1O75093 1534 aa16.68■□□□□ 0.26
LINC01228-201ENST00000567966 ANKRD50Q9ULJ7 1429 aa16.68■□□□□ 0.26
LINC01228-201ENST00000567966 EFCAB6Q5THR3 1501 aa16.67■□□□□ 0.26
LINC01228-201ENST00000567966 TXNDC2Q86VQ3 553 aa16.67■□□□□ 0.26
LINC01228-201ENST00000567966 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
LINC01228-201ENST00000567966 IDI1Q13907 227 aa16.66■□□□□ 0.26
LINC01228-201ENST00000567966 DISP3Q9P2K9 1392 aa16.65■□□□□ 0.26
LINC01228-201ENST00000567966 NOS1P29475 1434 aa16.65■□□□□ 0.26
LINC01228-201ENST00000567966 ITGAEP38570 1179 aa16.64■□□□□ 0.25
LINC01228-201ENST00000567966 ALKQ9UM73 1620 aa16.63■□□□□ 0.25
LINC01228-201ENST00000567966 PIP4K2BP78356 416 aa16.63■□□□□ 0.25
LINC01228-201ENST00000567966 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
LINC01228-201ENST00000567966 LRRC7Q96NW7 1537 aa16.62■□□□□ 0.25
LINC01228-201ENST00000567966 ILDR2Q71H61 639 aa16.62■□□□□ 0.25
LINC01228-201ENST00000567966 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
LINC01228-201ENST00000567966 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
LINC01228-201ENST00000567966 UNC13BO14795 1591 aa16.6■□□□□ 0.25
LINC01228-201ENST00000567966 TET3O43151 1660 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms