RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 DEPDC5O75140 1603 aa24.76■■□□□ 1.55
CMTM3-214ENST00000567572 ZNF518AQ6AHZ1 1483 aa24.76■■□□□ 1.55
CMTM3-214ENST00000567572 KIDINS220Q9ULH0 1771 aa24.73■■□□□ 1.55
CMTM3-214ENST00000567572 KDM5CP41229 1560 aa24.72■■□□□ 1.55
CMTM3-214ENST00000567572 NBPF8Q3BBV2 869 aa24.72■■□□□ 1.55
CMTM3-214ENST00000567572 CYB5RLQ6IPT4 315 aa24.72■■□□□ 1.55
CMTM3-214ENST00000567572 EIF2AK4Q9P2K8 1649 aaKnown RBP24.72■■□□□ 1.55
CMTM3-214ENST00000567572 HSPA5P11021 654 aaKnown RBP24.71■■□□□ 1.55
CMTM3-214ENST00000567572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.71■■□□□ 1.55
CMTM3-214ENST00000567572 POGZQ7Z3K3 1410 aa24.71■■□□□ 1.55
CMTM3-214ENST00000567572 MAP3K4Q9Y6R4 1608 aa24.7■■□□□ 1.54
CMTM3-214ENST00000567572 PLA2R1Q13018 1463 aa24.7■■□□□ 1.54
CMTM3-214ENST00000567572 NEO1Q92859 1461 aa24.7■■□□□ 1.54
CMTM3-214ENST00000567572 ATP10AO60312 1499 aa24.69■■□□□ 1.54
CMTM3-214ENST00000567572 GLI2P10070 1586 aa24.68■■□□□ 1.54
CMTM3-214ENST00000567572 WASHC2AQ641Q2 1341 aa24.67■■□□□ 1.54
CMTM3-214ENST00000567572 CNTLNQ9NXG0 1405 aa24.67■■□□□ 1.54
CMTM3-214ENST00000567572 UHRF1BP1Q6BDS2 1440 aa24.66■■□□□ 1.54
CMTM3-214ENST00000567572 DHX29Q7Z478 1369 aaKnown RBP24.66■■□□□ 1.54
CMTM3-214ENST00000567572 VWDEQ8N2E2 1590 aa24.66■■□□□ 1.54
CMTM3-214ENST00000567572 CCDC144AA2RUR9 1427 aa24.65■■□□□ 1.54
CMTM3-214ENST00000567572 POLR1AO95602 1720 aaPredicted RBP24.64■■□□□ 1.54
CMTM3-214ENST00000567572 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.53
CMTM3-214ENST00000567572 HECW2Q9P2P5 1572 aa24.63■■□□□ 1.53
CMTM3-214ENST00000567572 PRDM15P57071 1507 aaPredicted RBP24.63■■□□□ 1.53
CMTM3-214ENST00000567572 MROH1Q8NDA8 1641 aa24.63■■□□□ 1.53
CMTM3-214ENST00000567572 E9PCH4 1651 aa24.62■■□□□ 1.53
CMTM3-214ENST00000567572 TET3O43151 1660 aa24.61■■□□□ 1.53
CMTM3-214ENST00000567572 SPATA31E1Q6ZUB1 1445 aa24.61■■□□□ 1.53
CMTM3-214ENST00000567572 CCDC7Q96M83 1385 aa24.59■■□□□ 1.53
CMTM3-214ENST00000567572 DIP2BQ9P265 1576 aa24.58■■□□□ 1.53
CMTM3-214ENST00000567572 A2MP01023 1474 aa24.57■■□□□ 1.52
CMTM3-214ENST00000567572 MYT1LQ9UL68 1186 aa24.57■■□□□ 1.52
CMTM3-214ENST00000567572 RALGAPBQ86X10 1494 aa24.57■■□□□ 1.52
CMTM3-214ENST00000567572 RNF17Q9BXT8 1623 aaKnown RBP24.56■■□□□ 1.52
CMTM3-214ENST00000567572 FRMPD1Q5SYB0 1578 aa24.56■■□□□ 1.52
CMTM3-214ENST00000567572 KANK1Q14678 1352 aa24.55■■□□□ 1.52
CMTM3-214ENST00000567572 ABCA6Q8N139 1617 aa24.54■■□□□ 1.52
CMTM3-214ENST00000567572 TRPM2O94759 1503 aa24.54■■□□□ 1.52
CMTM3-214ENST00000567572 RICTORQ6R327 1708 aa24.54■■□□□ 1.52
CMTM3-214ENST00000567572 KIF3BO15066 747 aa24.54■■□□□ 1.52
CMTM3-214ENST00000567572 SPHKAPQ2M3C7 1700 aa24.53■■□□□ 1.52
CMTM3-214ENST00000567572 BCORL1Q5H9F3 1711 aa24.53■■□□□ 1.52
CMTM3-214ENST00000567572 PTPRTO14522 1441 aa24.52■■□□□ 1.52
CMTM3-214ENST00000567572 NEFLP07196 543 aa24.52■■□□□ 1.52
CMTM3-214ENST00000567572 MYT1Q01538 1121 aa24.49■■□□□ 1.51
CMTM3-214ENST00000567572 ZNF326Q5BKZ1 582 aaKnown RBP24.49■■□□□ 1.51
CMTM3-214ENST00000567572 DCAF11Q8TEB1 546 aa24.49■■□□□ 1.51
CMTM3-214ENST00000567572 LMTK2Q8IWU2 1503 aa24.49■■□□□ 1.51
CMTM3-214ENST00000567572 EFCAB6Q5THR3 1501 aa24.48■■□□□ 1.51
CMTM3-214ENST00000567572 PRAG1Q86YV5 1406 aa24.47■■□□□ 1.51
CMTM3-214ENST00000567572 ARID4BQ4LE39 1312 aaPredicted RBP24.47■■□□□ 1.51
CMTM3-214ENST00000567572 DIP2CQ9Y2E4 1556 aa24.47■■□□□ 1.51
CMTM3-214ENST00000567572 RAPGEF3O95398 923 aa24.46■■□□□ 1.51
CMTM3-214ENST00000567572 CEP152O94986 1710 aa24.45■■□□□ 1.51
CMTM3-214ENST00000567572 PPRC1Q5VV67 1664 aaKnown RBP24.45■■□□□ 1.5
CMTM3-214ENST00000567572 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.5
CMTM3-214ENST00000567572 USP47Q96K76 1375 aa24.45■■□□□ 1.5
CMTM3-214ENST00000567572 CLTCL1P53675 1640 aa24.45■■□□□ 1.5
CMTM3-214ENST00000567572 FAM69CQ0P6D2 419 aa24.44■■□□□ 1.5
CMTM3-214ENST00000567572 KDM2AQ9Y2K7 1162 aa24.44■■□□□ 1.5
CMTM3-214ENST00000567572 FKBP8Q14318 412 aa24.43■■□□□ 1.5
CMTM3-214ENST00000567572 KIF7Q2M1P5 1343 aa24.42■■□□□ 1.5
CMTM3-214ENST00000567572 PRKRIP1Q9H875 184 aaPredicted RBP24.41■■□□□ 1.5
CMTM3-214ENST00000567572 C11orf95C9JLR9 678 aaPredicted RBP24.41■■□□□ 1.5
CMTM3-214ENST00000567572 ZMYM4Q5VZL5 1548 aa24.4■■□□□ 1.5
CMTM3-214ENST00000567572 RGL3Q3MIN7 710 aa24.4■■□□□ 1.5
CMTM3-214ENST00000567572 NEURL4Q96JN8 1562 aa24.39■■□□□ 1.5
CMTM3-214ENST00000567572 LAMC1P11047 1609 aa24.37■■□□□ 1.49
CMTM3-214ENST00000567572 HNRNPUQ00839 825 aaKnown RBP eCLIP24.36■■□□□ 1.49
CMTM3-214ENST00000567572 CARD11Q9BXL7 1154 aa24.36■■□□□ 1.49
CMTM3-214ENST00000567572 TSPOAP1O95153 1857 aa24.35■■□□□ 1.49
CMTM3-214ENST00000567572 ROCK2O75116 1388 aaKnown RBP24.35■■□□□ 1.49
CMTM3-214ENST00000567572 GPRASP1Q5JY77 1395 aa24.35■■□□□ 1.49
CMTM3-214ENST00000567572 YEATS2Q9ULM3 1422 aa24.34■■□□□ 1.49
CMTM3-214ENST00000567572 ABCC3O15438 1527 aa24.34■■□□□ 1.49
CMTM3-214ENST00000567572 KIF13AQ9H1H9 1805 aa24.33■■□□□ 1.49
CMTM3-214ENST00000567572 TSHZ2Q9NRE2 1034 aa24.32■■□□□ 1.48
CMTM3-214ENST00000567572 MADDQ8WXG6 1647 aa24.32■■□□□ 1.48
CMTM3-214ENST00000567572 UGGT1Q9NYU2 1555 aa24.3■■□□□ 1.48
CMTM3-214ENST00000567572 NPATQ14207 1427 aa24.3■■□□□ 1.48
CMTM3-214ENST00000567572 ERICH6BQ5W0A0 696 aa24.29■■□□□ 1.48
CMTM3-214ENST00000567572 CAMSAP1Q5T5Y3 1602 aa24.29■■□□□ 1.48
CMTM3-214ENST00000567572 GGT6Q6P531 493 aa24.28■■□□□ 1.48
CMTM3-214ENST00000567572 ZC3H13Q5T200 1668 aaKnown RBP24.28■■□□□ 1.48
CMTM3-214ENST00000567572 STAC3Q96MF2 364 aa24.27■■□□□ 1.48
CMTM3-214ENST00000567572 KIF1BO60333 1816 aa24.27■■□□□ 1.48
CMTM3-214ENST00000567572 ZBED9Q6R2W3 1325 aa24.25■■□□□ 1.47
CMTM3-214ENST00000567572 NBPF1Q3BBV0 1214 aa24.24■■□□□ 1.47
CMTM3-214ENST00000567572 MRS2Q9HD23 443 aa24.24■■□□□ 1.47
CMTM3-214ENST00000567572 REREQ9P2R6 1566 aa24.24■■□□□ 1.47
CMTM3-214ENST00000567572 WASHC2CQ9Y4E1 1318 aa24.23■■□□□ 1.47
CMTM3-214ENST00000567572 MROH2AA6NES4 1674 aa24.23■■□□□ 1.47
CMTM3-214ENST00000567572 ST20-MTHFSA0A0A6YYL1 179 aa24.22■■□□□ 1.47
CMTM3-214ENST00000567572 IFT172Q9UG01 1749 aa24.22■■□□□ 1.47
CMTM3-214ENST00000567572 ADGRB3O60242 1522 aa24.22■■□□□ 1.47
CMTM3-214ENST00000567572 BCANQ96GW7 911 aa24.21■■□□□ 1.47
CMTM3-214ENST00000567572 MYOM2P54296 1465 aa24.21■■□□□ 1.47
CMTM3-214ENST00000567572 SIGLEC1Q9BZZ2 1709 aa24.2■■□□□ 1.46
CMTM3-214ENST00000567572 KTN1Q86UP2 1357 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms