RNA–Protein interactions for RNA: ENST00000567375.1

NSMCE1-212, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-212ENST00000567375 ESF1Q9H501 851 aaKnown RBP13.83□□□□□ -0.2
NSMCE1-212ENST00000567375 CEP170BQ9Y4F5 1589 aaPredicted RBP13.83□□□□□ -0.2
NSMCE1-212ENST00000567375 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
NSMCE1-212ENST00000567375 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
NSMCE1-212ENST00000567375 HSPA1LP34931 641 aa13.8□□□□□ -0.2
NSMCE1-212ENST00000567375 RANGAP1P46060 587 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-212ENST00000567375 PKD2Q13563 968 aa13.79□□□□□ -0.2
NSMCE1-212ENST00000567375 TROQ12816 1431 aaPredicted RBP13.79□□□□□ -0.2
NSMCE1-212ENST00000567375 CPS1P31327 1500 aa13.79□□□□□ -0.2
NSMCE1-212ENST00000567375 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
NSMCE1-212ENST00000567375 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-212ENST00000567375 MYT1LQ9UL68 1186 aa13.78□□□□□ -0.2
NSMCE1-212ENST00000567375 LRRIQ1Q96JM4 1722 aa13.76□□□□□ -0.21
NSMCE1-212ENST00000567375 CLIP1P30622 1438 aa13.76□□□□□ -0.21
NSMCE1-212ENST00000567375 ZMYM3Q14202 1370 aa13.76□□□□□ -0.21
NSMCE1-212ENST00000567375 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
NSMCE1-212ENST00000567375 PLXNC1O60486 1568 aa13.75□□□□□ -0.21
NSMCE1-212ENST00000567375 EEA1Q15075 1411 aa13.74□□□□□ -0.21
NSMCE1-212ENST00000567375 FMN1Q68DA7 1419 aa13.74□□□□□ -0.21
NSMCE1-212ENST00000567375 CDK11AQ9UQ88 783 aaPredicted RBP13.74□□□□□ -0.21
NSMCE1-212ENST00000567375 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
NSMCE1-212ENST00000567375 NEURL4Q96JN8 1562 aa13.74□□□□□ -0.21
NSMCE1-212ENST00000567375 PTPRKQ15262 1439 aa13.73□□□□□ -0.21
NSMCE1-212ENST00000567375 SAMD9LQ8IVG5 1584 aa13.73□□□□□ -0.21
NSMCE1-212ENST00000567375 CDC42BPAQ5VT25 1732 aa13.73□□□□□ -0.21
NSMCE1-212ENST00000567375 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
NSMCE1-212ENST00000567375 TOM1O60784 492 aa13.72□□□□□ -0.21
NSMCE1-212ENST00000567375 PIP4K2BP78356 416 aa13.71□□□□□ -0.21
NSMCE1-212ENST00000567375 A2ML1A8K2U0 1454 aa13.7□□□□□ -0.22
NSMCE1-212ENST00000567375 SHANK2Q9UPX8 1470 aa13.7□□□□□ -0.22
NSMCE1-212ENST00000567375 SP7Q8TDD2 431 aaPredicted RBP13.7□□□□□ -0.22
NSMCE1-212ENST00000567375 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
NSMCE1-212ENST00000567375 INO80Q9ULG1 1556 aaPredicted RBP13.69□□□□□ -0.22
NSMCE1-212ENST00000567375 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
NSMCE1-212ENST00000567375 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
NSMCE1-212ENST00000567375 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
NSMCE1-212ENST00000567375 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
NSMCE1-212ENST00000567375 ARHGAP35Q9NRY4 1499 aa13.66□□□□□ -0.22
NSMCE1-212ENST00000567375 SYNMO15061 1565 aa13.65□□□□□ -0.22
NSMCE1-212ENST00000567375 ADGBQ8N7X0 1667 aa13.64□□□□□ -0.23
NSMCE1-212ENST00000567375 A2MP01023 1474 aa13.64□□□□□ -0.23
NSMCE1-212ENST00000567375 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-212ENST00000567375 DEPDC5O75140 1603 aa13.63□□□□□ -0.23
NSMCE1-212ENST00000567375 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
NSMCE1-212ENST00000567375 SPAG9O60271 1321 aaKnown RBP13.61□□□□□ -0.23
NSMCE1-212ENST00000567375 STRCP1A6NGW2 1772 aa13.6□□□□□ -0.23
NSMCE1-212ENST00000567375 IQGAP1P46940 1657 aa13.6□□□□□ -0.23
NSMCE1-212ENST00000567375 EVX2Q03828 476 aa13.6□□□□□ -0.23
NSMCE1-212ENST00000567375 MED14O60244 1454 aa13.6□□□□□ -0.23
NSMCE1-212ENST00000567375 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-212ENST00000567375 RGS17Q9UGC6 210 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-212ENST00000567375 FAM135AQ9P2D6 1515 aa13.59□□□□□ -0.23
NSMCE1-212ENST00000567375 KIAA1107Q9UPP5 1409 aa13.57□□□□□ -0.24
NSMCE1-212ENST00000567375 PLEKHH2Q8IVE3 1493 aa13.57□□□□□ -0.24
NSMCE1-212ENST00000567375 HAX1O00165 279 aa13.57□□□□□ -0.24
NSMCE1-212ENST00000567375 LRRC7Q96NW7 1537 aa13.57□□□□□ -0.24
NSMCE1-212ENST00000567375 NPHP4O75161 1426 aaPredicted RBP13.56□□□□□ -0.24
NSMCE1-212ENST00000567375 PZPP20742 1482 aa13.56□□□□□ -0.24
NSMCE1-212ENST00000567375 TNRQ92752 1358 aa13.56□□□□□ -0.24
NSMCE1-212ENST00000567375 GPATCH8Q9UKJ3 1502 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-212ENST00000567375 GGT6Q6P531 493 aa13.55□□□□□ -0.24
NSMCE1-212ENST00000567375 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
NSMCE1-212ENST00000567375 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
NSMCE1-212ENST00000567375 CASKIN1Q8WXD9 1431 aa13.54□□□□□ -0.24
NSMCE1-212ENST00000567375 NLRP1Q9C000 1473 aa13.54□□□□□ -0.24
NSMCE1-212ENST00000567375 UGGT1Q9NYU2 1555 aa13.54□□□□□ -0.24
NSMCE1-212ENST00000567375 SETD1AO15047 1707 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-212ENST00000567375 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
NSMCE1-212ENST00000567375 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-212ENST00000567375 ANKLE2Q86XL3 938 aa13.52□□□□□ -0.25
NSMCE1-212ENST00000567375 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
NSMCE1-212ENST00000567375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
NSMCE1-212ENST00000567375 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
NSMCE1-212ENST00000567375 HNRNPMP52272 730 aaKnown RBP eCLIP13.51□□□□□ -0.25
NSMCE1-212ENST00000567375 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
NSMCE1-212ENST00000567375 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
NSMCE1-212ENST00000567375 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
NSMCE1-212ENST00000567375 FBXO31Q5XUX0 539 aaPredicted RBP13.47□□□□□ -0.25
NSMCE1-212ENST00000567375 POTEAQ6S8J7 498 aa13.47□□□□□ -0.25
NSMCE1-212ENST00000567375 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
NSMCE1-212ENST00000567375 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
NSMCE1-212ENST00000567375 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-212ENST00000567375 DHX29Q7Z478 1369 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-212ENST00000567375 MBD5Q9P267 1494 aa13.44□□□□□ -0.26
NSMCE1-212ENST00000567375 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
NSMCE1-212ENST00000567375 UBR1Q8IWV7 1749 aa13.43□□□□□ -0.26
NSMCE1-212ENST00000567375 CFDP1Q9UEE9 299 aaPredicted RBP13.43□□□□□ -0.26
NSMCE1-212ENST00000567375 TIAM1Q13009 1591 aa13.42□□□□□ -0.26
NSMCE1-212ENST00000567375 ROBO1Q9Y6N7 1651 aa13.42□□□□□ -0.26
NSMCE1-212ENST00000567375 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
NSMCE1-212ENST00000567375 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
NSMCE1-212ENST00000567375 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
NSMCE1-212ENST00000567375 SCAF11Q99590 1463 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-212ENST00000567375 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
NSMCE1-212ENST00000567375 KIF3BO15066 747 aa13.38□□□□□ -0.27
NSMCE1-212ENST00000567375 ABCC3O15438 1527 aa13.38□□□□□ -0.27
NSMCE1-212ENST00000567375 ERVK-7P63135 1459 aa13.37□□□□□ -0.27
NSMCE1-212ENST00000567375 CCDC141Q6ZP82 1450 aa13.37□□□□□ -0.27
NSMCE1-212ENST00000567375 SLIT1O75093 1534 aa13.37□□□□□ -0.27
NSMCE1-212ENST00000567375 LRRC9Q6ZRR7 1453 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms