RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 GPATCH8Q9UKJ3 1502 aaKnown RBP16.47■□□□□ 0.23
LINC00564-201ENST00000567258 CD44P16070 742 aaKnown RBP16.47■□□□□ 0.23
LINC00564-201ENST00000567258 LHX8Q68G74 356 aa16.47■□□□□ 0.23
LINC00564-201ENST00000567258 ABCA6Q8N139 1617 aa16.47■□□□□ 0.23
LINC00564-201ENST00000567258 PLEKHH2Q8IVE3 1493 aa16.47■□□□□ 0.23
LINC00564-201ENST00000567258 TRAPPC8Q9Y2L5 1435 aa16.46■□□□□ 0.23
LINC00564-201ENST00000567258 SAMD9LQ8IVG5 1584 aa16.46■□□□□ 0.23
LINC00564-201ENST00000567258 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
LINC00564-201ENST00000567258 REREQ9P2R6 1566 aa16.45■□□□□ 0.22
LINC00564-201ENST00000567258 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
LINC00564-201ENST00000567258 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
LINC00564-201ENST00000567258 SUPT6HQ7KZ85 1726 aaKnown RBP16.44■□□□□ 0.22
LINC00564-201ENST00000567258 SPAG9O60271 1321 aaKnown RBP16.44■□□□□ 0.22
LINC00564-201ENST00000567258 LOC105371045A0A1W2PR82 267 aa16.43■□□□□ 0.22
LINC00564-201ENST00000567258 HNRNPMP52272 730 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00564-201ENST00000567258 SETD1BQ9UPS6 1966 aaKnown RBP16.42■□□□□ 0.22
LINC00564-201ENST00000567258 KIAA1107Q9UPP5 1409 aa16.41■□□□□ 0.22
LINC00564-201ENST00000567258 TIAM1Q13009 1591 aa16.4■□□□□ 0.22
LINC00564-201ENST00000567258 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
LINC00564-201ENST00000567258 PREX1Q8TCU6 1659 aa16.4■□□□□ 0.22
LINC00564-201ENST00000567258 AGLP35573 1532 aa16.4■□□□□ 0.22
LINC00564-201ENST00000567258 ATP7AQ04656 1500 aa16.38■□□□□ 0.21
LINC00564-201ENST00000567258 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
LINC00564-201ENST00000567258 ADGBQ8N7X0 1667 aa16.36■□□□□ 0.21
LINC00564-201ENST00000567258 C3P01024 1663 aa16.35■□□□□ 0.21
LINC00564-201ENST00000567258 CEBPAP49715 358 aaPredicted RBP16.35■□□□□ 0.21
LINC00564-201ENST00000567258 HSPA2P54652 639 aa16.35■□□□□ 0.21
LINC00564-201ENST00000567258 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
LINC00564-201ENST00000567258 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
LINC00564-201ENST00000567258 NCOA2Q15596 1464 aa16.34■□□□□ 0.21
LINC00564-201ENST00000567258 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
LINC00564-201ENST00000567258 ILDR1Q86SU0 546 aaPredicted RBP16.33■□□□□ 0.2
LINC00564-201ENST00000567258 ZNF644Q9H582 1327 aaPredicted RBP16.32■□□□□ 0.2
LINC00564-201ENST00000567258 A2MP01023 1474 aa16.31■□□□□ 0.2
LINC00564-201ENST00000567258 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
LINC00564-201ENST00000567258 RSPH4AQ5TD94 716 aa16.31■□□□□ 0.2
LINC00564-201ENST00000567258 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
LINC00564-201ENST00000567258 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
LINC00564-201ENST00000567258 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
LINC00564-201ENST00000567258 GGT6Q6P531 493 aa16.28■□□□□ 0.2
LINC00564-201ENST00000567258 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
LINC00564-201ENST00000567258 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.2
LINC00564-201ENST00000567258 TSPY4P0CV99 314 aa16.27■□□□□ 0.2
LINC00564-201ENST00000567258 TSPY10P0CW01 314 aa16.27■□□□□ 0.2
LINC00564-201ENST00000567258 CLCN6P51797 869 aa16.27■□□□□ 0.2
LINC00564-201ENST00000567258 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
LINC00564-201ENST00000567258 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.19
LINC00564-201ENST00000567258 MBD5Q9P267 1494 aa16.27■□□□□ 0.19
LINC00564-201ENST00000567258 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
LINC00564-201ENST00000567258 ZMYM3Q14202 1370 aa16.23■□□□□ 0.19
LINC00564-201ENST00000567258 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
LINC00564-201ENST00000567258 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
LINC00564-201ENST00000567258 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
LINC00564-201ENST00000567258 FBXO41Q8TF61 875 aa16.21■□□□□ 0.19
LINC00564-201ENST00000567258 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
LINC00564-201ENST00000567258 NPATQ14207 1427 aa16.2■□□□□ 0.18
LINC00564-201ENST00000567258 KIF3BO15066 747 aa16.2■□□□□ 0.18
LINC00564-201ENST00000567258 KANK4Q5T7N3 995 aaPredicted RBP16.2■□□□□ 0.18
LINC00564-201ENST00000567258 STRCQ7RTU9 1775 aa16.2■□□□□ 0.18
LINC00564-201ENST00000567258 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
LINC00564-201ENST00000567258 MYOM3Q5VTT5 1437 aa16.19■□□□□ 0.18
LINC00564-201ENST00000567258 DCBLD2Q96PD2 775 aa16.18■□□□□ 0.18
LINC00564-201ENST00000567258 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
LINC00564-201ENST00000567258 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
LINC00564-201ENST00000567258 WASHC2CQ9Y4E1 1318 aa16.15■□□□□ 0.18
LINC00564-201ENST00000567258 MYO3AQ8NEV4 1616 aa16.14■□□□□ 0.17
LINC00564-201ENST00000567258 FAM135AQ9P2D6 1515 aa16.14■□□□□ 0.17
LINC00564-201ENST00000567258 MAST1Q9Y2H9 1570 aa16.13■□□□□ 0.17
LINC00564-201ENST00000567258 CERKQ8TCT0 537 aa16.13■□□□□ 0.17
LINC00564-201ENST00000567258 ZNF142P52746 1687 aaPredicted RBP16.13■□□□□ 0.17
LINC00564-201ENST00000567258 KDM5DQ9BY66 1539 aa16.13■□□□□ 0.17
LINC00564-201ENST00000567258 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
LINC00564-201ENST00000567258 SPDYE4A6NLX3 237 aa16.12■□□□□ 0.17
LINC00564-201ENST00000567258 PTPN23Q9H3S7 1636 aa16.12■□□□□ 0.17
LINC00564-201ENST00000567258 PTPRKQ15262 1439 aa16.11■□□□□ 0.17
LINC00564-201ENST00000567258 PTPRTO14522 1441 aa16.11■□□□□ 0.17
LINC00564-201ENST00000567258 CEP170BQ9Y4F5 1589 aaPredicted RBP16.1■□□□□ 0.17
LINC00564-201ENST00000567258 EIF2AK4Q9P2K8 1649 aaKnown RBP16.1■□□□□ 0.17
LINC00564-201ENST00000567258 CROCC2H7BZ55 1655 aa16.09■□□□□ 0.17
LINC00564-201ENST00000567258 CFAP65Q6ZU64 1925 aaKnown RBP16.09■□□□□ 0.17
LINC00564-201ENST00000567258 NCOA1Q15788 1441 aa16.09■□□□□ 0.17
LINC00564-201ENST00000567258 ZC3H13Q5T200 1668 aaKnown RBP16.08■□□□□ 0.16
LINC00564-201ENST00000567258 RNF17Q9BXT8 1623 aaKnown RBP16.06■□□□□ 0.16
LINC00564-201ENST00000567258 DUOX2Q9NRD8 1548 aa16.06■□□□□ 0.16
LINC00564-201ENST00000567258 PZPP20742 1482 aa16.06■□□□□ 0.16
LINC00564-201ENST00000567258 PKD2Q13563 968 aa16.06■□□□□ 0.16
LINC00564-201ENST00000567258 TNRQ92752 1358 aa16.05■□□□□ 0.16
LINC00564-201ENST00000567258 DNMT1P26358 1616 aaKnown RBP16.05■□□□□ 0.16
LINC00564-201ENST00000567258 A2ML1A8K2U0 1454 aa16.04■□□□□ 0.16
LINC00564-201ENST00000567258 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
LINC00564-201ENST00000567258 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
LINC00564-201ENST00000567258 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
LINC00564-201ENST00000567258 CEP152O94986 1710 aa16.03■□□□□ 0.16
LINC00564-201ENST00000567258 NCKAP5LQ9HCH0 1330 aa16.03■□□□□ 0.16
LINC00564-201ENST00000567258 FBXO31Q5XUX0 539 aaPredicted RBP16.03■□□□□ 0.16
LINC00564-201ENST00000567258 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
LINC00564-201ENST00000567258 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.16
LINC00564-201ENST00000567258 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
LINC00564-201ENST00000567258 GALR2O43603 387 aaPredicted RBP16.02■□□□□ 0.16
LINC00564-201ENST00000567258 DAPK1P53355 1430 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms