RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 FMN1Q68DA7 1419 aa16.3■□□□□ 0.2
CAPN3-216ENST00000567071 STRCP1A6NGW2 1772 aa16.3■□□□□ 0.2
CAPN3-216ENST00000567071 PLXNC1O60486 1568 aa16.3■□□□□ 0.2
CAPN3-216ENST00000567071 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
CAPN3-216ENST00000567071 ATP7AQ04656 1500 aa16.28■□□□□ 0.2
CAPN3-216ENST00000567071 UGGT1Q9NYU2 1555 aa16.27■□□□□ 0.2
CAPN3-216ENST00000567071 NLRP1Q9C000 1473 aa16.25■□□□□ 0.19
CAPN3-216ENST00000567071 TRIM52Q96A61 297 aa16.25■□□□□ 0.19
CAPN3-216ENST00000567071 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
CAPN3-216ENST00000567071 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
CAPN3-216ENST00000567071 ADGBQ8N7X0 1667 aa16.22■□□□□ 0.19
CAPN3-216ENST00000567071 FBXO31Q5XUX0 539 aaPredicted RBP16.22■□□□□ 0.19
CAPN3-216ENST00000567071 ZNF772Q68DY9 489 aaPredicted RBP16.22■□□□□ 0.19
CAPN3-216ENST00000567071 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
CAPN3-216ENST00000567071 PZPP20742 1482 aa16.22■□□□□ 0.19
CAPN3-216ENST00000567071 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
CAPN3-216ENST00000567071 ROBO1Q9Y6N7 1651 aa16.19■□□□□ 0.18
CAPN3-216ENST00000567071 HNRNPMP52272 730 aaKnown RBP eCLIP16.19■□□□□ 0.18
CAPN3-216ENST00000567071 MEX3CQ5U5Q3 659 aaKnown RBP16.19■□□□□ 0.18
CAPN3-216ENST00000567071 MIA2Q96PC5 1412 aa16.19■□□□□ 0.18
CAPN3-216ENST00000567071 JCADQ9P266 1359 aa16.18■□□□□ 0.18
CAPN3-216ENST00000567071 ADRA2BP18089 450 aa16.18■□□□□ 0.18
CAPN3-216ENST00000567071 XIRP1Q702N8 1843 aaKnown RBP16.17■□□□□ 0.18
CAPN3-216ENST00000567071 PLEKHH2Q8IVE3 1493 aa16.17■□□□□ 0.18
CAPN3-216ENST00000567071 KDM5DQ9BY66 1539 aa16.17■□□□□ 0.18
CAPN3-216ENST00000567071 LRRC9Q6ZRR7 1453 aa16.16■□□□□ 0.18
CAPN3-216ENST00000567071 RXRBP28702 533 aa16.15■□□□□ 0.18
CAPN3-216ENST00000567071 ZC3H13Q5T200 1668 aaKnown RBP16.14■□□□□ 0.18
CAPN3-216ENST00000567071 WASHC2CQ9Y4E1 1318 aa16.14■□□□□ 0.17
CAPN3-216ENST00000567071 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
CAPN3-216ENST00000567071 KIAA1107Q9UPP5 1409 aa16.13■□□□□ 0.17
CAPN3-216ENST00000567071 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
CAPN3-216ENST00000567071 EEA1Q15075 1411 aa16.12■□□□□ 0.17
CAPN3-216ENST00000567071 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
CAPN3-216ENST00000567071 CDK12Q9NYV4 1490 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-216ENST00000567071 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
CAPN3-216ENST00000567071 SPATA31A6Q5VVP1 1343 aa16.1■□□□□ 0.17
CAPN3-216ENST00000567071 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
CAPN3-216ENST00000567071 KIF3BO15066 747 aa16.09■□□□□ 0.17
CAPN3-216ENST00000567071 TMEM94Q12767 1356 aa16.08■□□□□ 0.16
CAPN3-216ENST00000567071 DHX29Q7Z478 1369 aaKnown RBP16.08■□□□□ 0.16
CAPN3-216ENST00000567071 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
CAPN3-216ENST00000567071 GPATCH8Q9UKJ3 1502 aaKnown RBP16.05■□□□□ 0.16
CAPN3-216ENST00000567071 ARHGAP35Q9NRY4 1499 aa16.05■□□□□ 0.16
CAPN3-216ENST00000567071 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
CAPN3-216ENST00000567071 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
CAPN3-216ENST00000567071 MSH6P52701 1360 aa16.03■□□□□ 0.16
CAPN3-216ENST00000567071 TXNDC2Q86VQ3 553 aa16.03■□□□□ 0.16
CAPN3-216ENST00000567071 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
CAPN3-216ENST00000567071 LRP6O75581 1613 aa16.03■□□□□ 0.16
CAPN3-216ENST00000567071 RTEL1-TNFRSF6BF6WH68 1400 aa16.02■□□□□ 0.16
CAPN3-216ENST00000567071 NUTM2BA6NNL0 878 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-216ENST00000567071 NUTM2EB1AL46 878 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-216ENST00000567071 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-216ENST00000567071 NUTM2AQ8IVF1 878 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-216ENST00000567071 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
CAPN3-216ENST00000567071 SLAIN2Q9P270 581 aa16.01■□□□□ 0.15
CAPN3-216ENST00000567071 UBR1Q8IWV7 1749 aa16.01■□□□□ 0.15
CAPN3-216ENST00000567071 UBTFP17480 764 aaKnown RBP16■□□□□ 0.15
CAPN3-216ENST00000567071 COL16A1Q07092 1604 aaPredicted RBP16■□□□□ 0.15
CAPN3-216ENST00000567071 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
CAPN3-216ENST00000567071 MAP3K1Q13233 1512 aa15.99■□□□□ 0.15
CAPN3-216ENST00000567071 KCNA6P17658 529 aa15.98■□□□□ 0.15
CAPN3-216ENST00000567071 LTKP29376 864 aa15.97■□□□□ 0.15
CAPN3-216ENST00000567071 SHPRHQ149N8 1683 aa15.97■□□□□ 0.15
CAPN3-216ENST00000567071 SLIT1O75093 1534 aa15.97■□□□□ 0.15
CAPN3-216ENST00000567071 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
CAPN3-216ENST00000567071 TIAM1Q13009 1591 aa15.96■□□□□ 0.15
CAPN3-216ENST00000567071 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
CAPN3-216ENST00000567071 ATAD2Q6PL18 1390 aa15.96■□□□□ 0.15
CAPN3-216ENST00000567071 ARHGAP23Q9P227 1491 aa15.96■□□□□ 0.14
CAPN3-216ENST00000567071 PRDM15P57071 1507 aaPredicted RBP15.95■□□□□ 0.14
CAPN3-216ENST00000567071 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
CAPN3-216ENST00000567071 SETBP1Q9Y6X0 1596 aa15.95■□□□□ 0.14
CAPN3-216ENST00000567071 AFF2P51816 1311 aa15.94■□□□□ 0.14
CAPN3-216ENST00000567071 RGS12O14924 1447 aa15.94■□□□□ 0.14
CAPN3-216ENST00000567071 ABCC3O15438 1527 aa15.94■□□□□ 0.14
CAPN3-216ENST00000567071 RBM6P78332 1123 aaKnown RBP15.94■□□□□ 0.14
CAPN3-216ENST00000567071 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
CAPN3-216ENST00000567071 CFAP65Q6ZU64 1925 aaKnown RBP15.93■□□□□ 0.14
CAPN3-216ENST00000567071 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
CAPN3-216ENST00000567071 NGLY1Q96IV0 654 aa15.9■□□□□ 0.14
CAPN3-216ENST00000567071 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
CAPN3-216ENST00000567071 QTRT2Q9H974 415 aaKnown RBP15.9■□□□□ 0.14
CAPN3-216ENST00000567071 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
CAPN3-216ENST00000567071 MBD5Q9P267 1494 aa15.9■□□□□ 0.14
CAPN3-216ENST00000567071 AHDC1Q5TGY3 1603 aaPredicted RBP15.88■□□□□ 0.13
CAPN3-216ENST00000567071 FYCO1Q9BQS8 1478 aa15.88■□□□□ 0.13
CAPN3-216ENST00000567071 KDM5AP29375 1690 aaKnown RBP15.87■□□□□ 0.13
CAPN3-216ENST00000567071 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
CAPN3-216ENST00000567071 ZNF644Q9H582 1327 aaPredicted RBP15.87■□□□□ 0.13
CAPN3-216ENST00000567071 NWD1Q149M9 1564 aa15.87■□□□□ 0.13
CAPN3-216ENST00000567071 TMEM2Q9UHN6 1383 aa15.87■□□□□ 0.13
CAPN3-216ENST00000567071 CCDC141Q6ZP82 1450 aa15.86■□□□□ 0.13
CAPN3-216ENST00000567071 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
CAPN3-216ENST00000567071 RSPH4AQ5TD94 716 aa15.84■□□□□ 0.13
CAPN3-216ENST00000567071 CCDC125Q86Z20 511 aa15.84■□□□□ 0.13
CAPN3-216ENST00000567071 BCANQ96GW7 911 aa15.84■□□□□ 0.13
CAPN3-216ENST00000567071 MTUS2Q5JR59 1369 aa15.84■□□□□ 0.13
CAPN3-216ENST00000567071 C8orf37Q96NL8 207 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms