RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 CAMSAP1Q5T5Y3 1602 aa22.35■■□□□ 1.17
COMMD4-216ENST00000567023 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
COMMD4-216ENST00000567023 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
COMMD4-216ENST00000567023 WASHC2CQ9Y4E1 1318 aa22.34■■□□□ 1.17
COMMD4-216ENST00000567023 CEP170BQ9Y4F5 1589 aaPredicted RBP22.33■■□□□ 1.17
COMMD4-216ENST00000567023 PZPP20742 1482 aa22.32■■□□□ 1.16
COMMD4-216ENST00000567023 PLA2R1Q13018 1463 aa22.32■■□□□ 1.16
COMMD4-216ENST00000567023 PKD2Q13563 968 aa22.3■■□□□ 1.16
COMMD4-216ENST00000567023 FBXO31Q5XUX0 539 aaPredicted RBP22.3■■□□□ 1.16
COMMD4-216ENST00000567023 RNF17Q9BXT8 1623 aaKnown RBP22.29■■□□□ 1.16
COMMD4-216ENST00000567023 A2ML1A8K2U0 1454 aa22.28■■□□□ 1.16
COMMD4-216ENST00000567023 EIF2AK4Q9P2K8 1649 aaKnown RBP22.28■■□□□ 1.16
COMMD4-216ENST00000567023 ABCC5O15440 1437 aa22.28■■□□□ 1.16
COMMD4-216ENST00000567023 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
COMMD4-216ENST00000567023 PTPN23Q9H3S7 1636 aa22.28■■□□□ 1.16
COMMD4-216ENST00000567023 TNRQ92752 1358 aa22.27■■□□□ 1.16
COMMD4-216ENST00000567023 SHANK2Q9UPX8 1470 aa22.27■■□□□ 1.16
COMMD4-216ENST00000567023 NCKAP5LQ9HCH0 1330 aa22.27■■□□□ 1.16
COMMD4-216ENST00000567023 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
COMMD4-216ENST00000567023 DUOX2Q9NRD8 1548 aa22.26■■□□□ 1.15
COMMD4-216ENST00000567023 DNMT1P26358 1616 aaKnown RBP22.25■■□□□ 1.15
COMMD4-216ENST00000567023 LTBP4Q8N2S1 1624 aa22.24■■□□□ 1.15
COMMD4-216ENST00000567023 ABCC3O15438 1527 aa22.22■■□□□ 1.15
COMMD4-216ENST00000567023 CROCC2H7BZ55 1655 aa22.22■■□□□ 1.15
COMMD4-216ENST00000567023 ZC3H13Q5T200 1668 aaKnown RBP22.22■■□□□ 1.15
COMMD4-216ENST00000567023 KIF15Q9NS87 1388 aa22.22■■□□□ 1.15
COMMD4-216ENST00000567023 DAPK1P53355 1430 aa22.22■■□□□ 1.15
COMMD4-216ENST00000567023 MROH1Q8NDA8 1641 aa22.21■■□□□ 1.15
COMMD4-216ENST00000567023 NLRP1Q9C000 1473 aa22.21■■□□□ 1.15
COMMD4-216ENST00000567023 ERBINQ96RT1 1412 aa22.2■■□□□ 1.14
COMMD4-216ENST00000567023 RRP7BPQ9NSQ0 103 aa22.19■■□□□ 1.14
COMMD4-216ENST00000567023 IQSEC2Q5JU85 1478 aa22.18■■□□□ 1.14
COMMD4-216ENST00000567023 THEMISQ8N1K5 641 aaPredicted RBP22.17■■□□□ 1.14
COMMD4-216ENST00000567023 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
COMMD4-216ENST00000567023 PRDM15P57071 1507 aaPredicted RBP22.14■■□□□ 1.13
COMMD4-216ENST00000567023 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
COMMD4-216ENST00000567023 UGGT1Q9NYU2 1555 aa22.13■■□□□ 1.13
COMMD4-216ENST00000567023 ZNF335Q9H4Z2 1342 aaPredicted RBP22.13■■□□□ 1.13
COMMD4-216ENST00000567023 ARHGAP31Q2M1Z3 1444 aa22.13■■□□□ 1.13
COMMD4-216ENST00000567023 ERVK-7P63135 1459 aa22.12■■□□□ 1.13
COMMD4-216ENST00000567023 ANKLE2Q86XL3 938 aa22.12■■□□□ 1.13
COMMD4-216ENST00000567023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.12■■□□□ 1.13
COMMD4-216ENST00000567023 CEP152O94986 1710 aa22.11■■□□□ 1.13
COMMD4-216ENST00000567023 DEPDC5O75140 1603 aa22.1■■□□□ 1.13
COMMD4-216ENST00000567023 NEURL4Q96JN8 1562 aa22.1■■□□□ 1.13
COMMD4-216ENST00000567023 CHIC2Q9UKJ5 165 aa22.1■■□□□ 1.13
COMMD4-216ENST00000567023 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
COMMD4-216ENST00000567023 ADGRL2O95490 1459 aa22.09■■□□□ 1.13
COMMD4-216ENST00000567023 MED14O60244 1454 aa22.07■■□□□ 1.12
COMMD4-216ENST00000567023 FAM50AQ14320 339 aaKnown RBP22.06■■□□□ 1.12
COMMD4-216ENST00000567023 KANK1Q14678 1352 aa22.06■■□□□ 1.12
COMMD4-216ENST00000567023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.12
COMMD4-216ENST00000567023 LMTK2Q8IWU2 1503 aa22.04■■□□□ 1.12
COMMD4-216ENST00000567023 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
COMMD4-216ENST00000567023 CFAP65Q6ZU64 1925 aaKnown RBP22.03■■□□□ 1.12
COMMD4-216ENST00000567023 NPHP4O75161 1426 aaPredicted RBP22.01■■□□□ 1.11
COMMD4-216ENST00000567023 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
COMMD4-216ENST00000567023 CPS1P31327 1500 aa21.98■■□□□ 1.11
COMMD4-216ENST00000567023 ANKRD50Q9ULJ7 1429 aa21.97■■□□□ 1.11
COMMD4-216ENST00000567023 ARHGAP23Q9P227 1491 aa21.96■■□□□ 1.11
COMMD4-216ENST00000567023 SLIT1O75093 1534 aa21.96■■□□□ 1.11
COMMD4-216ENST00000567023 IQGAP1P46940 1657 aa21.95■■□□□ 1.1
COMMD4-216ENST00000567023 UBAP1LF5GYI3 381 aa21.94■■□□□ 1.1
COMMD4-216ENST00000567023 ROCK1Q13464 1354 aa21.93■■□□□ 1.1
COMMD4-216ENST00000567023 EFCAB6Q5THR3 1501 aa21.93■■□□□ 1.1
COMMD4-216ENST00000567023 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
COMMD4-216ENST00000567023 NOS1P29475 1434 aa21.92■■□□□ 1.1
COMMD4-216ENST00000567023 LTKP29376 864 aa21.92■■□□□ 1.1
COMMD4-216ENST00000567023 IDI1Q13907 227 aa21.92■■□□□ 1.1
COMMD4-216ENST00000567023 TXNDC2Q86VQ3 553 aa21.91■■□□□ 1.1
COMMD4-216ENST00000567023 KDM5AP29375 1690 aaKnown RBP21.91■■□□□ 1.1
COMMD4-216ENST00000567023 PIK3C2BO00750 1634 aa21.9■■□□□ 1.1
COMMD4-216ENST00000567023 RPRD2Q5VT52 1461 aaKnown RBP21.9■■□□□ 1.1
COMMD4-216ENST00000567023 TMEM2Q9UHN6 1383 aa21.89■■□□□ 1.1
COMMD4-216ENST00000567023 SLC52A1Q9NWF4 448 aa21.89■■□□□ 1.09
COMMD4-216ENST00000567023 EID1Q9Y6B2 187 aa21.89■■□□□ 1.09
COMMD4-216ENST00000567023 SYNMO15061 1565 aa21.88■■□□□ 1.09
COMMD4-216ENST00000567023 STAG3Q9UJ98 1225 aa21.87■■□□□ 1.09
COMMD4-216ENST00000567023 TOM1O60784 492 aa21.85■■□□□ 1.09
COMMD4-216ENST00000567023 UNC13BO14795 1591 aa21.83■■□□□ 1.09
COMMD4-216ENST00000567023 TET3O43151 1660 aa21.83■■□□□ 1.09
COMMD4-216ENST00000567023 STRCP1A6NGW2 1772 aa21.83■■□□□ 1.09
COMMD4-216ENST00000567023 PPARGC1BQ86YN6 1023 aaKnown RBP21.82■■□□□ 1.08
COMMD4-216ENST00000567023 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
COMMD4-216ENST00000567023 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
COMMD4-216ENST00000567023 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
COMMD4-216ENST00000567023 ITGAEP38570 1179 aa21.77■■□□□ 1.08
COMMD4-216ENST00000567023 DISP3Q9P2K9 1392 aa21.76■■□□□ 1.07
COMMD4-216ENST00000567023 IQGAP3Q86VI3 1631 aa21.76■■□□□ 1.07
COMMD4-216ENST00000567023 RRBP1Q9P2E9 1410 aaKnown RBP21.75■■□□□ 1.07
COMMD4-216ENST00000567023 PIP4K2BP78356 416 aa21.75■■□□□ 1.07
COMMD4-216ENST00000567023 ALKQ9UM73 1620 aa21.75■■□□□ 1.07
COMMD4-216ENST00000567023 NUP155O75694 1391 aa21.74■■□□□ 1.07
COMMD4-216ENST00000567023 E9PCH4 1651 aa21.72■■□□□ 1.07
COMMD4-216ENST00000567023 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
COMMD4-216ENST00000567023 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
COMMD4-216ENST00000567023 TMEM131LA2VDJ0 1609 aa21.71■■□□□ 1.07
COMMD4-216ENST00000567023 HSPA1LP34931 641 aa21.71■■□□□ 1.07
COMMD4-216ENST00000567023 HDGFP51858 240 aaKnown RBP21.71■■□□□ 1.07
COMMD4-216ENST00000567023 KCNA6P17658 529 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms