RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 PPP6R1Q9UPN7 881 aa24.96■■□□□ 1.59
PALB2-205ENST00000567003 FBXO31Q5XUX0 539 aaPredicted RBP24.95■■□□□ 1.58
PALB2-205ENST00000567003 CAMSAP2Q08AD1 1489 aa24.94■■□□□ 1.58
PALB2-205ENST00000567003 CCDC141Q6ZP82 1450 aa24.94■■□□□ 1.58
PALB2-205ENST00000567003 KIF3BO15066 747 aa24.93■■□□□ 1.58
PALB2-205ENST00000567003 NCOA2Q15596 1464 aa24.93■■□□□ 1.58
PALB2-205ENST00000567003 NEURL4Q96JN8 1562 aa24.92■■□□□ 1.58
PALB2-205ENST00000567003 POLR1AO95602 1720 aaPredicted RBP24.92■■□□□ 1.58
PALB2-205ENST00000567003 TNRQ92752 1358 aa24.92■■□□□ 1.58
PALB2-205ENST00000567003 KDM5DQ9BY66 1539 aa24.91■■□□□ 1.58
PALB2-205ENST00000567003 PZPP20742 1482 aa24.89■■□□□ 1.57
PALB2-205ENST00000567003 WASHC2CQ9Y4E1 1318 aa24.84■■□□□ 1.57
PALB2-205ENST00000567003 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.56
PALB2-205ENST00000567003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.82■■□□□ 1.56
PALB2-205ENST00000567003 FAM135AQ9P2D6 1515 aa24.81■■□□□ 1.56
PALB2-205ENST00000567003 ARHGEF5Q12774 1597 aa24.81■■□□□ 1.56
PALB2-205ENST00000567003 SHANK2Q9UPX8 1470 aa24.81■■□□□ 1.56
PALB2-205ENST00000567003 PIP4K2BP78356 416 aa24.8■■□□□ 1.56
PALB2-205ENST00000567003 MIA2Q96PC5 1412 aa24.78■■□□□ 1.56
PALB2-205ENST00000567003 CPS1P31327 1500 aa24.78■■□□□ 1.56
PALB2-205ENST00000567003 HSPA1LP34931 641 aa24.78■■□□□ 1.56
PALB2-205ENST00000567003 VWDEQ8N2E2 1590 aa24.78■■□□□ 1.56
PALB2-205ENST00000567003 UGGT1Q9NYU2 1555 aa24.77■■□□□ 1.56
PALB2-205ENST00000567003 RSPH4AQ5TD94 716 aa24.76■■□□□ 1.55
PALB2-205ENST00000567003 NLRP1Q9C000 1473 aa24.76■■□□□ 1.55
PALB2-205ENST00000567003 ANKLE2Q86XL3 938 aa24.75■■□□□ 1.55
PALB2-205ENST00000567003 RNF17Q9BXT8 1623 aaKnown RBP24.75■■□□□ 1.55
PALB2-205ENST00000567003 ABCC3O15438 1527 aa24.74■■□□□ 1.55
PALB2-205ENST00000567003 NPHP4O75161 1426 aaPredicted RBP24.73■■□□□ 1.55
PALB2-205ENST00000567003 TSPY4P0CV99 314 aa24.73■■□□□ 1.55
PALB2-205ENST00000567003 TSPY10P0CW01 314 aa24.73■■□□□ 1.55
PALB2-205ENST00000567003 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
PALB2-205ENST00000567003 THEMISQ8N1K5 641 aaPredicted RBP24.72■■□□□ 1.55
PALB2-205ENST00000567003 DEPDC5O75140 1603 aa24.72■■□□□ 1.55
PALB2-205ENST00000567003 MED1Q15648 1581 aaPredicted RBP24.71■■□□□ 1.55
PALB2-205ENST00000567003 MAST1Q9Y2H9 1570 aa24.71■■□□□ 1.55
PALB2-205ENST00000567003 IQGAP1P46940 1657 aa24.7■■□□□ 1.54
PALB2-205ENST00000567003 ALKQ9UM73 1620 aa24.7■■□□□ 1.54
PALB2-205ENST00000567003 MED14O60244 1454 aa24.7■■□□□ 1.54
PALB2-205ENST00000567003 TOM1O60784 492 aa24.69■■□□□ 1.54
PALB2-205ENST00000567003 STRCP1A6NGW2 1772 aa24.69■■□□□ 1.54
PALB2-205ENST00000567003 MROH1Q8NDA8 1641 aa24.68■■□□□ 1.54
PALB2-205ENST00000567003 CEP152O94986 1710 aa24.68■■□□□ 1.54
PALB2-205ENST00000567003 CFAP65Q6ZU64 1925 aaKnown RBP24.68■■□□□ 1.54
PALB2-205ENST00000567003 ZC3H13Q5T200 1668 aaKnown RBP24.68■■□□□ 1.54
PALB2-205ENST00000567003 ERVK-7P63135 1459 aa24.67■■□□□ 1.54
PALB2-205ENST00000567003 VPS8Q8N3P4 1428 aa24.67■■□□□ 1.54
PALB2-205ENST00000567003 EIF2AK4Q9P2K8 1649 aaKnown RBP24.65■■□□□ 1.54
PALB2-205ENST00000567003 KANK4Q5T7N3 995 aaPredicted RBP24.65■■□□□ 1.54
PALB2-205ENST00000567003 LOC105371045A0A1W2PR82 267 aa24.62■■□□□ 1.53
PALB2-205ENST00000567003 UBR1Q8IWV7 1749 aa24.61■■□□□ 1.53
PALB2-205ENST00000567003 LRRC7Q96NW7 1537 aa24.6■■□□□ 1.53
PALB2-205ENST00000567003 MYOM3Q5VTT5 1437 aa24.6■■□□□ 1.53
PALB2-205ENST00000567003 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
PALB2-205ENST00000567003 SYNMO15061 1565 aa24.55■■□□□ 1.52
PALB2-205ENST00000567003 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
PALB2-205ENST00000567003 MAP3K1Q13233 1512 aa24.52■■□□□ 1.52
PALB2-205ENST00000567003 CROCC2H7BZ55 1655 aa24.52■■□□□ 1.52
PALB2-205ENST00000567003 LTKP29376 864 aa24.51■■□□□ 1.51
PALB2-205ENST00000567003 KIF15Q9NS87 1388 aa24.51■■□□□ 1.51
PALB2-205ENST00000567003 PRDM15P57071 1507 aaPredicted RBP24.51■■□□□ 1.51
PALB2-205ENST00000567003 ABCC5O15440 1437 aa24.49■■□□□ 1.51
PALB2-205ENST00000567003 ARHGAP23Q9P227 1491 aa24.49■■□□□ 1.51
PALB2-205ENST00000567003 RRP7BPQ9NSQ0 103 aa24.48■■□□□ 1.51
PALB2-205ENST00000567003 PIK3C2BO00750 1634 aa24.47■■□□□ 1.51
PALB2-205ENST00000567003 PTPN23Q9H3S7 1636 aa24.47■■□□□ 1.51
PALB2-205ENST00000567003 SLIT1O75093 1534 aa24.47■■□□□ 1.51
PALB2-205ENST00000567003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.47■■□□□ 1.512e-6■□□□□ 10.2
PALB2-205ENST00000567003 XIRP1Q702N8 1843 aaKnown RBP24.47■■□□□ 1.51
PALB2-205ENST00000567003 TXNDC2Q86VQ3 553 aa24.46■■□□□ 1.51
PALB2-205ENST00000567003 ARHGAP31Q2M1Z3 1444 aa24.45■■□□□ 1.51
PALB2-205ENST00000567003 ERBINQ96RT1 1412 aa24.45■■□□□ 1.51
PALB2-205ENST00000567003 DAPK1P53355 1430 aa24.41■■□□□ 1.5
PALB2-205ENST00000567003 EID1Q9Y6B2 187 aa24.38■■□□□ 1.49
PALB2-205ENST00000567003 TMEM2Q9UHN6 1383 aa24.38■■□□□ 1.49
PALB2-205ENST00000567003 CHIC2Q9UKJ5 165 aa24.37■■□□□ 1.49
PALB2-205ENST00000567003 FGD6Q6ZV73 1430 aa24.35■■□□□ 1.49
PALB2-205ENST00000567003 KANK1Q14678 1352 aa24.35■■□□□ 1.49
PALB2-205ENST00000567003 STAG3Q9UJ98 1225 aa24.35■■□□□ 1.49
PALB2-205ENST00000567003 EFCAB6Q5THR3 1501 aa24.35■■□□□ 1.49
PALB2-205ENST00000567003 LMTK2Q8IWU2 1503 aa24.32■■□□□ 1.48
PALB2-205ENST00000567003 IDI1Q13907 227 aa24.32■■□□□ 1.48
PALB2-205ENST00000567003 RBM33Q96EV2 1170 aaKnown RBP24.31■■□□□ 1.48
PALB2-205ENST00000567003 TMEM94Q12767 1356 aa24.3■■□□□ 1.48
PALB2-205ENST00000567003 RGS17Q9UGC6 210 aaPredicted RBP24.3■■□□□ 1.48
PALB2-205ENST00000567003 KDM5AP29375 1690 aaKnown RBP24.3■■□□□ 1.48
PALB2-205ENST00000567003 APLP2Q06481 763 aa24.29■■□□□ 1.48
PALB2-205ENST00000567003 SLC26A8Q96RN1 970 aa24.29■■□□□ 1.48
PALB2-205ENST00000567003 ANKRD30AQ9BXX3 1397 aa24.29■■□□□ 1.48
PALB2-205ENST00000567003 ADGRB3O60242 1522 aa24.28■■□□□ 1.48
PALB2-205ENST00000567003 TET3O43151 1660 aa24.27■■□□□ 1.48
PALB2-205ENST00000567003 NOS1P29475 1434 aa24.27■■□□□ 1.48
PALB2-205ENST00000567003 ROBO1Q9Y6N7 1651 aa24.25■■□□□ 1.47
PALB2-205ENST00000567003 FAM135BQ49AJ0 1406 aa24.25■■□□□ 1.47
PALB2-205ENST00000567003 KCNA6P17658 529 aa24.24■■□□□ 1.47
PALB2-205ENST00000567003 PROSER2Q86WR7 435 aaPredicted RBP24.23■■□□□ 1.47
PALB2-205ENST00000567003 MYO5BQ9ULV0 1848 aa24.21■■□□□ 1.47
PALB2-205ENST00000567003 NWD1Q149M9 1564 aa24.21■■□□□ 1.47
PALB2-205ENST00000567003 ADGRL2O95490 1459 aa24.19■■□□□ 1.46
PALB2-205ENST00000567003 BCANQ96GW7 911 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms