RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 CEP162Q5TB80 1403 aa26.17■■□□□ 1.78
EDC3-212ENST00000566828 CAMSAP2Q08AD1 1489 aa26.16■■□□□ 1.78
EDC3-212ENST00000566828 CCDC141Q6ZP82 1450 aa26.16■■□□□ 1.78
EDC3-212ENST00000566828 FAM135AQ9P2D6 1515 aa26.15■■□□□ 1.78
EDC3-212ENST00000566828 PZPP20742 1482 aa26.15■■□□□ 1.78
EDC3-212ENST00000566828 DHX29Q7Z478 1369 aaKnown RBP26.14■■□□□ 1.78
EDC3-212ENST00000566828 TNRQ92752 1358 aa26.12■■□□□ 1.77
EDC3-212ENST00000566828 CPS1P31327 1500 aa26.11■■□□□ 1.77
EDC3-212ENST00000566828 MED1Q15648 1581 aaPredicted RBP26.09■■□□□ 1.77
EDC3-212ENST00000566828 NCOA2Q15596 1464 aa26.09■■□□□ 1.77
EDC3-212ENST00000566828 KIF3BO15066 747 aa26.07■■□□□ 1.76
EDC3-212ENST00000566828 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
EDC3-212ENST00000566828 VWDEQ8N2E2 1590 aa26.07■■□□□ 1.76
EDC3-212ENST00000566828 SHANK2Q9UPX8 1470 aa26.06■■□□□ 1.76
EDC3-212ENST00000566828 ARHGEF5Q12774 1597 aa26.05■■□□□ 1.76
EDC3-212ENST00000566828 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
EDC3-212ENST00000566828 UGGT1Q9NYU2 1555 aa26.04■■□□□ 1.76
EDC3-212ENST00000566828 DEPDC5O75140 1603 aa26.04■■□□□ 1.76
EDC3-212ENST00000566828 RNF17Q9BXT8 1623 aaKnown RBP26.03■■□□□ 1.76
EDC3-212ENST00000566828 IQGAP1P46940 1657 aa26.03■■□□□ 1.76
EDC3-212ENST00000566828 ZC3H13Q5T200 1668 aaKnown RBP26.03■■□□□ 1.76
EDC3-212ENST00000566828 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
EDC3-212ENST00000566828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.01■■□□□ 1.752e-11■□□□□ 9.6
EDC3-212ENST00000566828 PIP4K2BP78356 416 aa26■■□□□ 1.75
EDC3-212ENST00000566828 WASHC2CQ9Y4E1 1318 aa25.99■■□□□ 1.75
EDC3-212ENST00000566828 STRCP1A6NGW2 1772 aa25.99■■□□□ 1.75
EDC3-212ENST00000566828 ALKQ9UM73 1620 aa25.99■■□□□ 1.75
EDC3-212ENST00000566828 HSPA1LP34931 641 aa25.98■■□□□ 1.75
EDC3-212ENST00000566828 CEP152O94986 1710 aa25.97■■□□□ 1.75
EDC3-212ENST00000566828 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
EDC3-212ENST00000566828 MIA2Q96PC5 1412 aa25.97■■□□□ 1.75
EDC3-212ENST00000566828 EIF2AK4Q9P2K8 1649 aaKnown RBP25.96■■□□□ 1.75
EDC3-212ENST00000566828 ABCC3O15438 1527 aa25.96■■□□□ 1.75
EDC3-212ENST00000566828 MED14O60244 1454 aa25.96■■□□□ 1.75
EDC3-212ENST00000566828 MAST1Q9Y2H9 1570 aa25.95■■□□□ 1.74
EDC3-212ENST00000566828 TOM1O60784 492 aa25.94■■□□□ 1.74
EDC3-212ENST00000566828 SYNMO15061 1565 aa25.94■■□□□ 1.74
EDC3-212ENST00000566828 MROH1Q8NDA8 1641 aa25.93■■□□□ 1.74
EDC3-212ENST00000566828 ANKLE2Q86XL3 938 aa25.93■■□□□ 1.74
EDC3-212ENST00000566828 RSPH4AQ5TD94 716 aa25.9■■□□□ 1.74
EDC3-212ENST00000566828 UBR1Q8IWV7 1749 aa25.9■■□□□ 1.74
EDC3-212ENST00000566828 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.74
EDC3-212ENST00000566828 ERVK-7P63135 1459 aa25.89■■□□□ 1.73
EDC3-212ENST00000566828 CFAP65Q6ZU64 1925 aaKnown RBP25.88■■□□□ 1.73
EDC3-212ENST00000566828 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
EDC3-212ENST00000566828 LRRC7Q96NW7 1537 aa25.84■■□□□ 1.73
EDC3-212ENST00000566828 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
EDC3-212ENST00000566828 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
EDC3-212ENST00000566828 CROCC2H7BZ55 1655 aa25.82■■□□□ 1.72
EDC3-212ENST00000566828 XIRP1Q702N8 1843 aaKnown RBP25.79■■□□□ 1.72
EDC3-212ENST00000566828 VPS8Q8N3P4 1428 aa25.79■■□□□ 1.72
EDC3-212ENST00000566828 SENP3Q9H4L4 574 aaPredicted RBP25.78■■□□□ 1.72
EDC3-212ENST00000566828 SCAF11Q99590 1463 aaKnown RBP25.77■■□□□ 1.72
EDC3-212ENST00000566828 PRDM15P57071 1507 aaPredicted RBP25.77■■□□□ 1.72
EDC3-212ENST00000566828 PHF23Q9BUL5 403 aaPredicted RBP25.76■■□□□ 1.71
EDC3-212ENST00000566828 DUOX2Q9NRD8 1548 aa25.76■■□□□ 1.71
EDC3-212ENST00000566828 MYOM3Q5VTT5 1437 aa25.73■■□□□ 1.71
EDC3-212ENST00000566828 PIK3C2BO00750 1634 aa25.73■■□□□ 1.71
EDC3-212ENST00000566828 SLIT1O75093 1534 aa25.73■■□□□ 1.71
EDC3-212ENST00000566828 ARHGAP23Q9P227 1491 aa25.72■■□□□ 1.71
EDC3-212ENST00000566828 MAP3K1Q13233 1512 aa25.68■■□□□ 1.7
EDC3-212ENST00000566828 KANK4Q5T7N3 995 aaPredicted RBP25.66■■□□□ 1.7
EDC3-212ENST00000566828 ERBINQ96RT1 1412 aa25.65■■□□□ 1.7
EDC3-212ENST00000566828 PTPN23Q9H3S7 1636 aa25.65■■□□□ 1.7
EDC3-212ENST00000566828 KIF15Q9NS87 1388 aa25.65■■□□□ 1.7
EDC3-212ENST00000566828 ARHGAP31Q2M1Z3 1444 aa25.64■■□□□ 1.7
EDC3-212ENST00000566828 KDM5AP29375 1690 aaKnown RBP25.62■■□□□ 1.69
EDC3-212ENST00000566828 LTKP29376 864 aa25.62■■□□□ 1.69
EDC3-212ENST00000566828 TXNDC2Q86VQ3 553 aa25.59■■□□□ 1.69
EDC3-212ENST00000566828 ABCC5O15440 1437 aa25.59■■□□□ 1.69
EDC3-212ENST00000566828 EFCAB6Q5THR3 1501 aa25.58■■□□□ 1.68
EDC3-212ENST00000566828 DAPK1P53355 1430 aa25.55■■□□□ 1.68
EDC3-212ENST00000566828 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
EDC3-212ENST00000566828 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
EDC3-212ENST00000566828 RRP7BPQ9NSQ0 103 aa25.54■■□□□ 1.68
EDC3-212ENST00000566828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.53■■□□□ 1.683e-7■■□□□ 13.1
EDC3-212ENST00000566828 EID1Q9Y6B2 187 aa25.53■■□□□ 1.68
EDC3-212ENST00000566828 LMTK2Q8IWU2 1503 aa25.53■■□□□ 1.68
EDC3-212ENST00000566828 ADGRB3O60242 1522 aa25.52■■□□□ 1.68
EDC3-212ENST00000566828 LOC105371045A0A1W2PR82 267 aa25.51■■□□□ 1.67
EDC3-212ENST00000566828 KANK1Q14678 1352 aa25.5■■□□□ 1.67
EDC3-212ENST00000566828 NWD1Q149M9 1564 aa25.5■■□□□ 1.67
EDC3-212ENST00000566828 TET3O43151 1660 aa25.48■■□□□ 1.67
EDC3-212ENST00000566828 TMEM94Q12767 1356 aa25.48■■□□□ 1.67
EDC3-212ENST00000566828 RGS17Q9UGC6 210 aaPredicted RBP25.48■■□□□ 1.67
EDC3-212ENST00000566828 STAG3Q9UJ98 1225 aa25.48■■□□□ 1.67
EDC3-212ENST00000566828 MYO5BQ9ULV0 1848 aa25.48■■□□□ 1.67
EDC3-212ENST00000566828 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
EDC3-212ENST00000566828 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
EDC3-212ENST00000566828 NKTRP30414 1462 aaKnown RBP25.44■■□□□ 1.66
EDC3-212ENST00000566828 GCC2Q8IWJ2 1684 aa25.44■■□□□ 1.66
EDC3-212ENST00000566828 NOS1P29475 1434 aa25.42■■□□□ 1.66
EDC3-212ENST00000566828 PHLPP1O60346 1717 aa25.42■■□□□ 1.66
EDC3-212ENST00000566828 ANKRD30AQ9BXX3 1397 aa25.42■■□□□ 1.66
EDC3-212ENST00000566828 SETD1AO15047 1707 aaKnown RBP25.41■■□□□ 1.66
EDC3-212ENST00000566828 IDI1Q13907 227 aa25.41■■□□□ 1.66
EDC3-212ENST00000566828 RBM33Q96EV2 1170 aaKnown RBP25.4■■□□□ 1.66
EDC3-212ENST00000566828 SLC26A8Q96RN1 970 aa25.4■■□□□ 1.66
EDC3-212ENST00000566828 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.66
EDC3-212ENST00000566828 KCNA6P17658 529 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms