RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 CEP162Q5TB80 1403 aa32.52■■■□□ 2.8
PDXDC1-213ENST00000566426 RSPH4AQ5TD94 716 aa32.51■■■□□ 2.79
PDXDC1-213ENST00000566426 TOM1O60784 492 aa32.5■■■□□ 2.79
PDXDC1-213ENST00000566426 FBXO31Q5XUX0 539 aaPredicted RBP32.5■■■□□ 2.79
PDXDC1-213ENST00000566426 SCAF1Q9H7N4 1312 aaKnown RBP32.49■■■□□ 2.79
PDXDC1-213ENST00000566426 WASHC2CQ9Y4E1 1318 aa32.49■■■□□ 2.79
PDXDC1-213ENST00000566426 CPS1P31327 1500 aa32.47■■■□□ 2.79
PDXDC1-213ENST00000566426 FAM135AQ9P2D6 1515 aa32.47■■■□□ 2.79
PDXDC1-213ENST00000566426 ANKLE2Q86XL3 938 aa32.47■■■□□ 2.79
PDXDC1-213ENST00000566426 PZPP20742 1482 aa32.47■■■□□ 2.79
PDXDC1-213ENST00000566426 PIP4K2BP78356 416 aa32.45■■■□□ 2.79
PDXDC1-213ENST00000566426 THEMISQ8N1K5 641 aaPredicted RBP32.45■■■□□ 2.79
PDXDC1-213ENST00000566426 CCDC141Q6ZP82 1450 aa32.45■■■□□ 2.79
PDXDC1-213ENST00000566426 KDM5DQ9BY66 1539 aa32.45■■■□□ 2.78
PDXDC1-213ENST00000566426 POLR1AO95602 1720 aaPredicted RBP32.44■■■□□ 2.78
PDXDC1-213ENST00000566426 SHANK2Q9UPX8 1470 aa32.43■■■□□ 2.78
PDXDC1-213ENST00000566426 HSPA1LP34931 641 aa32.42■■■□□ 2.78
PDXDC1-213ENST00000566426 NEURL4Q96JN8 1562 aa32.4■■■□□ 2.78
PDXDC1-213ENST00000566426 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.39■■■□□ 2.78
PDXDC1-213ENST00000566426 MIA2Q96PC5 1412 aa32.39■■■□□ 2.78
PDXDC1-213ENST00000566426 TSPY4P0CV99 314 aa32.38■■■□□ 2.77
PDXDC1-213ENST00000566426 TSPY10P0CW01 314 aa32.38■■■□□ 2.77
PDXDC1-213ENST00000566426 CAMSAP2Q08AD1 1489 aa32.37■■■□□ 2.77
PDXDC1-213ENST00000566426 NLRP1Q9C000 1473 aa32.37■■■□□ 2.77
PDXDC1-213ENST00000566426 NCOA2Q15596 1464 aa32.35■■■□□ 2.77
PDXDC1-213ENST00000566426 UGGT1Q9NYU2 1555 aa32.32■■■□□ 2.77
PDXDC1-213ENST00000566426 NPHP4O75161 1426 aaPredicted RBP32.31■■■□□ 2.76
PDXDC1-213ENST00000566426 MED14O60244 1454 aa32.3■■■□□ 2.76
PDXDC1-213ENST00000566426 MED1Q15648 1581 aaPredicted RBP32.28■■■□□ 2.76
PDXDC1-213ENST00000566426 VWDEQ8N2E2 1590 aa32.28■■■□□ 2.76
PDXDC1-213ENST00000566426 DEPDC5O75140 1603 aa32.27■■■□□ 2.76
PDXDC1-213ENST00000566426 ARHGEF5Q12774 1597 aa32.27■■■□□ 2.76
PDXDC1-213ENST00000566426 PHF23Q9BUL5 403 aaPredicted RBP32.19■■■□□ 2.74
PDXDC1-213ENST00000566426 IQGAP1P46940 1657 aa32.18■■■□□ 2.74
PDXDC1-213ENST00000566426 ABCC3O15438 1527 aa32.16■■■□□ 2.74
PDXDC1-213ENST00000566426 RNF17Q9BXT8 1623 aaKnown RBP32.15■■■□□ 2.74
PDXDC1-213ENST00000566426 ZC3H13Q5T200 1668 aaKnown RBP32.15■■■□□ 2.74
PDXDC1-213ENST00000566426 MAST1Q9Y2H9 1570 aa32.11■■■□□ 2.73
PDXDC1-213ENST00000566426 ERVK-7P63135 1459 aa32.11■■■□□ 2.73
PDXDC1-213ENST00000566426 LRRC7Q96NW7 1537 aa32.1■■■□□ 2.73
PDXDC1-213ENST00000566426 ALKQ9UM73 1620 aa32.1■■■□□ 2.73
PDXDC1-213ENST00000566426 EIF2AK4Q9P2K8 1649 aaKnown RBP32.08■■■□□ 2.73
PDXDC1-213ENST00000566426 LRRC9Q6ZRR7 1453 aa32.08■■■□□ 2.73
PDXDC1-213ENST00000566426 SYNMO15061 1565 aa32.06■■■□□ 2.72
PDXDC1-213ENST00000566426 STRCP1A6NGW2 1772 aa32.04■■■□□ 2.72
PDXDC1-213ENST00000566426 SENP3Q9H4L4 574 aaPredicted RBP32.03■■■□□ 2.72
PDXDC1-213ENST00000566426 SCAF11Q99590 1463 aaKnown RBP32.02■■■□□ 2.72
PDXDC1-213ENST00000566426 TXNDC2Q86VQ3 553 aa32■■■□□ 2.71
PDXDC1-213ENST00000566426 VPS8Q8N3P4 1428 aa32■■■□□ 2.71
PDXDC1-213ENST00000566426 UBR1Q8IWV7 1749 aa31.99■■■□□ 2.71
PDXDC1-213ENST00000566426 DUOX2Q9NRD8 1548 aa31.99■■■□□ 2.71
PDXDC1-213ENST00000566426 MYOM3Q5VTT5 1437 aa31.99■■■□□ 2.71
PDXDC1-213ENST00000566426 CFAP65Q6ZU64 1925 aaKnown RBP31.98■■■□□ 2.71
PDXDC1-213ENST00000566426 MROH1Q8NDA8 1641 aa31.98■■■□□ 2.71
PDXDC1-213ENST00000566426 EID1Q9Y6B2 187 aa31.98■■■□□ 2.71
PDXDC1-213ENST00000566426 CEP152O94986 1710 aa31.96■■■□□ 2.71
PDXDC1-213ENST00000566426 LTKP29376 864 aa31.96■■■□□ 2.71
PDXDC1-213ENST00000566426 ARHGAP31Q2M1Z3 1444 aa31.94■■■□□ 2.7
PDXDC1-213ENST00000566426 ARHGAP23Q9P227 1491 aa31.94■■■□□ 2.7
PDXDC1-213ENST00000566426 KANK4Q5T7N3 995 aaPredicted RBP31.93■■■□□ 2.7
PDXDC1-213ENST00000566426 SLIT1O75093 1534 aa31.93■■■□□ 2.7
PDXDC1-213ENST00000566426 MAP3K1Q13233 1512 aa31.91■■■□□ 2.7
PDXDC1-213ENST00000566426 KIF15Q9NS87 1388 aa31.9■■■□□ 2.7
PDXDC1-213ENST00000566426 STAG3Q9UJ98 1225 aa31.89■■■□□ 2.7
PDXDC1-213ENST00000566426 ERBINQ96RT1 1412 aa31.86■■■□□ 2.69
PDXDC1-213ENST00000566426 RRP7BPQ9NSQ0 103 aa31.86■■■□□ 2.69
PDXDC1-213ENST00000566426 PRDM15P57071 1507 aaPredicted RBP31.85■■■□□ 2.69
PDXDC1-213ENST00000566426 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.85■■■□□ 2.695e-12■■□□□ 13.9
PDXDC1-213ENST00000566426 KANK1Q14678 1352 aa31.84■■■□□ 2.69
PDXDC1-213ENST00000566426 TMEM2Q9UHN6 1383 aa31.83■■■□□ 2.69
PDXDC1-213ENST00000566426 FAM135BQ49AJ0 1406 aa31.8■■■□□ 2.68
PDXDC1-213ENST00000566426 ABCC5O15440 1437 aa31.79■■■□□ 2.68
PDXDC1-213ENST00000566426 RGS17Q9UGC6 210 aaPredicted RBP31.78■■■□□ 2.68
PDXDC1-213ENST00000566426 XIRP1Q702N8 1843 aaKnown RBP31.77■■■□□ 2.68
PDXDC1-213ENST00000566426 PIK3C2BO00750 1634 aa31.77■■■□□ 2.68
PDXDC1-213ENST00000566426 LOC105371045A0A1W2PR82 267 aa31.76■■■□□ 2.67
PDXDC1-213ENST00000566426 KCNA6P17658 529 aa31.75■■■□□ 2.67
PDXDC1-213ENST00000566426 TMEM94Q12767 1356 aa31.74■■■□□ 2.67
PDXDC1-213ENST00000566426 IDI1Q13907 227 aa31.74■■■□□ 2.67
PDXDC1-213ENST00000566426 EFCAB6Q5THR3 1501 aa31.73■■■□□ 2.67
PDXDC1-213ENST00000566426 APLP2Q06481 763 aa31.72■■■□□ 2.67
PDXDC1-213ENST00000566426 CROCC2H7BZ55 1655 aa31.72■■■□□ 2.67
PDXDC1-213ENST00000566426 KDM5AP29375 1690 aaKnown RBP31.72■■■□□ 2.67
PDXDC1-213ENST00000566426 PROSER2Q86WR7 435 aaPredicted RBP31.71■■■□□ 2.67
PDXDC1-213ENST00000566426 PTPN23Q9H3S7 1636 aa31.71■■■□□ 2.67
PDXDC1-213ENST00000566426 DAPK1P53355 1430 aa31.7■■■□□ 2.67
PDXDC1-213ENST00000566426 SLC26A8Q96RN1 970 aa31.68■■■□□ 2.66
PDXDC1-213ENST00000566426 LMTK2Q8IWU2 1503 aa31.68■■■□□ 2.66
PDXDC1-213ENST00000566426 ANKRD30AQ9BXX3 1397 aa31.68■■■□□ 2.66
PDXDC1-213ENST00000566426 SLC52A1Q9NWF4 448 aa31.64■■■□□ 2.66
PDXDC1-213ENST00000566426 CHIC2Q9UKJ5 165 aa31.64■■■□□ 2.66
PDXDC1-213ENST00000566426 TET3O43151 1660 aa31.64■■■□□ 2.65
PDXDC1-213ENST00000566426 BCANQ96GW7 911 aa31.63■■■□□ 2.65
PDXDC1-213ENST00000566426 NOS1P29475 1434 aa31.6■■■□□ 2.65
PDXDC1-213ENST00000566426 FGD6Q6ZV73 1430 aa31.6■■■□□ 2.65
PDXDC1-213ENST00000566426 POTEAQ6S8J7 498 aa31.6■■■□□ 2.65
PDXDC1-213ENST00000566426 RBM33Q96EV2 1170 aaKnown RBP31.6■■■□□ 2.65
PDXDC1-213ENST00000566426 ROBO1Q9Y6N7 1651 aa31.6■■■□□ 2.65
PDXDC1-213ENST00000566426 NKTRP30414 1462 aaKnown RBP31.59■■■□□ 2.65
PDXDC1-213ENST00000566426 MSH6P52701 1360 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms