RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 DUOX2Q9NRD8 1548 aa29.4■■■□□ 2.3
CPNE7-208ENST00000566398 SETD1BQ9UPS6 1966 aaKnown RBP29.39■■■□□ 2.3
CPNE7-208ENST00000566398 DNMT1P26358 1616 aaKnown RBP29.39■■■□□ 2.3
CPNE7-208ENST00000566398 CROCC2H7BZ55 1655 aa29.38■■■□□ 2.29
CPNE7-208ENST00000566398 EIF2AK4Q9P2K8 1649 aaKnown RBP29.36■■■□□ 2.29
CPNE7-208ENST00000566398 FAM50AQ14320 339 aaKnown RBP29.35■■■□□ 2.29
CPNE7-208ENST00000566398 RRP7BPQ9NSQ0 103 aa29.35■■■□□ 2.29
CPNE7-208ENST00000566398 RNF17Q9BXT8 1623 aaKnown RBP29.34■■■□□ 2.29
CPNE7-208ENST00000566398 ERBINQ96RT1 1412 aa29.33■■■□□ 2.29
CPNE7-208ENST00000566398 PZPP20742 1482 aa29.33■■■□□ 2.29
CPNE7-208ENST00000566398 ANKRD30AQ9BXX3 1397 aa29.32■■■□□ 2.28
CPNE7-208ENST00000566398 CHIC2Q9UKJ5 165 aa29.3■■■□□ 2.28
CPNE7-208ENST00000566398 MYO3AQ8NEV4 1616 aa29.3■■■□□ 2.28
CPNE7-208ENST00000566398 DMRT2Q9Y5R5 561 aa29.29■■■□□ 2.28
CPNE7-208ENST00000566398 ABCC3O15438 1527 aa29.28■■■□□ 2.28
CPNE7-208ENST00000566398 NCOA1Q15788 1441 aa29.27■■■□□ 2.28
CPNE7-208ENST00000566398 TNRQ92752 1358 aa29.26■■■□□ 2.28
CPNE7-208ENST00000566398 FBXO31Q5XUX0 539 aaPredicted RBP29.26■■■□□ 2.27
CPNE7-208ENST00000566398 CEP170BQ9Y4F5 1589 aaPredicted RBP29.26■■■□□ 2.27
CPNE7-208ENST00000566398 MROH1Q8NDA8 1641 aa29.25■■■□□ 2.27
CPNE7-208ENST00000566398 ZC3H13Q5T200 1668 aaKnown RBP29.24■■■□□ 2.27
CPNE7-208ENST00000566398 ADGRL2O95490 1459 aa29.23■■■□□ 2.27
CPNE7-208ENST00000566398 ILDR1Q86SU0 546 aaPredicted RBP29.23■■■□□ 2.27
CPNE7-208ENST00000566398 ZNF142P52746 1687 aaPredicted RBP29.23■■■□□ 2.27
CPNE7-208ENST00000566398 PPARGC1BQ86YN6 1023 aaKnown RBP29.22■■■□□ 2.27
CPNE7-208ENST00000566398 CAMSAP1Q5T5Y3 1602 aa29.22■■■□□ 2.27
CPNE7-208ENST00000566398 STRCQ7RTU9 1775 aa29.21■■■□□ 2.27
CPNE7-208ENST00000566398 PRDM15P57071 1507 aaPredicted RBP29.21■■■□□ 2.27
CPNE7-208ENST00000566398 A2ML1A8K2U0 1454 aa29.21■■■□□ 2.27
CPNE7-208ENST00000566398 PTPRTO14522 1441 aa29.19■■■□□ 2.26
CPNE7-208ENST00000566398 PLA2R1Q13018 1463 aa29.17■■■□□ 2.26
CPNE7-208ENST00000566398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.16■■■□□ 2.26
CPNE7-208ENST00000566398 KANK1Q14678 1352 aa29.15■■■□□ 2.26
CPNE7-208ENST00000566398 NLRP1Q9C000 1473 aa29.14■■■□□ 2.26
CPNE7-208ENST00000566398 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
CPNE7-208ENST00000566398 ERVK-7P63135 1459 aa29.12■■■□□ 2.25
CPNE7-208ENST00000566398 SPATA31D1Q6ZQQ2 1576 aa29.11■■■□□ 2.25
CPNE7-208ENST00000566398 PKD2Q13563 968 aa29.11■■■□□ 2.25
CPNE7-208ENST00000566398 NCKAP5LQ9HCH0 1330 aa29.11■■■□□ 2.25
CPNE7-208ENST00000566398 ANKRD50Q9ULJ7 1429 aa29.11■■■□□ 2.25
CPNE7-208ENST00000566398 CEP152O94986 1710 aa29.09■■■□□ 2.25
CPNE7-208ENST00000566398 FBXO41Q8TF61 875 aa29.09■■■□□ 2.25
CPNE7-208ENST00000566398 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.09■■■□□ 2.25
CPNE7-208ENST00000566398 ARHGAP31Q2M1Z3 1444 aa29.09■■■□□ 2.25
CPNE7-208ENST00000566398 ROCK1Q13464 1354 aa29.06■■■□□ 2.24
CPNE7-208ENST00000566398 CERKQ8TCT0 537 aa29.06■■■□□ 2.24
CPNE7-208ENST00000566398 LMTK2Q8IWU2 1503 aa29.04■■■□□ 2.24
CPNE7-208ENST00000566398 UGGT1Q9NYU2 1555 aa29.04■■■□□ 2.24
CPNE7-208ENST00000566398 ITGAEP38570 1179 aa29.03■■■□□ 2.24
CPNE7-208ENST00000566398 THEMISQ8N1K5 641 aaPredicted RBP29.03■■■□□ 2.24
CPNE7-208ENST00000566398 VWDEQ8N2E2 1590 aa29.03■■■□□ 2.24
CPNE7-208ENST00000566398 RRBP1Q9P2E9 1410 aaKnown RBP28.97■■■□□ 2.23
CPNE7-208ENST00000566398 ANKLE2Q86XL3 938 aa28.96■■■□□ 2.23
CPNE7-208ENST00000566398 EFCAB6Q5THR3 1501 aa28.95■■■□□ 2.23
CPNE7-208ENST00000566398 LTBP4Q8N2S1 1624 aa28.91■■■□□ 2.22
CPNE7-208ENST00000566398 NEURL4Q96JN8 1562 aa28.9■■■□□ 2.22
CPNE7-208ENST00000566398 ZNF335Q9H4Z2 1342 aaPredicted RBP28.9■■■□□ 2.22
CPNE7-208ENST00000566398 UNC13BO14795 1591 aa28.88■■■□□ 2.21
CPNE7-208ENST00000566398 RPRD2Q5VT52 1461 aaKnown RBP28.87■■■□□ 2.21
CPNE7-208ENST00000566398 POLR1AO95602 1720 aaPredicted RBP28.87■■■□□ 2.21
CPNE7-208ENST00000566398 NOS1P29475 1434 aa28.86■■■□□ 2.21
CPNE7-208ENST00000566398 NPHP4O75161 1426 aaPredicted RBP28.86■■■□□ 2.21
CPNE7-208ENST00000566398 MED14O60244 1454 aa28.85■■■□□ 2.21
CPNE7-208ENST00000566398 UBR1Q8IWV7 1749 aa28.83■■■□□ 2.21
CPNE7-208ENST00000566398 STAG3Q9UJ98 1225 aa28.82■■■□□ 2.2
CPNE7-208ENST00000566398 SYNMO15061 1565 aa28.82■■■□□ 2.2
CPNE7-208ENST00000566398 TET3O43151 1660 aa28.82■■■□□ 2.2
CPNE7-208ENST00000566398 IQSEC2Q5JU85 1478 aa28.8■■■□□ 2.2
CPNE7-208ENST00000566398 NUP155O75694 1391 aa28.8■■■□□ 2.2
CPNE7-208ENST00000566398 IDI1Q13907 227 aa28.8■■■□□ 2.2
CPNE7-208ENST00000566398 PIK3C2BO00750 1634 aa28.8■■■□□ 2.2
CPNE7-208ENST00000566398 SCAF11Q99590 1463 aaKnown RBP28.79■■■□□ 2.2
CPNE7-208ENST00000566398 ARHGAP23Q9P227 1491 aa28.79■■■□□ 2.2
CPNE7-208ENST00000566398 CFAP65Q6ZU64 1925 aaKnown RBP28.79■■■□□ 2.2
CPNE7-208ENST00000566398 SLIT1O75093 1534 aa28.79■■■□□ 2.2
CPNE7-208ENST00000566398 SLC52A1Q9NWF4 448 aa28.78■■■□□ 2.2
CPNE7-208ENST00000566398 IQGAP3Q86VI3 1631 aa28.76■■■□□ 2.2
CPNE7-208ENST00000566398 TMEM2Q9UHN6 1383 aa28.75■■■□□ 2.19
CPNE7-208ENST00000566398 TXNDC2Q86VQ3 553 aa28.75■■■□□ 2.19
CPNE7-208ENST00000566398 EID1Q9Y6B2 187 aa28.75■■■□□ 2.19
CPNE7-208ENST00000566398 IQGAP1P46940 1657 aa28.74■■■□□ 2.19
CPNE7-208ENST00000566398 GCC2Q8IWJ2 1684 aa28.74■■■□□ 2.19
CPNE7-208ENST00000566398 LTKP29376 864 aa28.73■■■□□ 2.19
CPNE7-208ENST00000566398 ADGRB3O60242 1522 aa28.73■■■□□ 2.19
CPNE7-208ENST00000566398 NAIPQ13075 1403 aa28.72■■■□□ 2.19
CPNE7-208ENST00000566398 KDM5AP29375 1690 aaKnown RBP28.7■■■□□ 2.19
CPNE7-208ENST00000566398 CPS1P31327 1500 aa28.7■■■□□ 2.19
CPNE7-208ENST00000566398 HFM1A2PYH4 1435 aa28.67■■■□□ 2.18
CPNE7-208ENST00000566398 E9PCH4 1651 aa28.66■■■□□ 2.18
CPNE7-208ENST00000566398 UBAP1LF5GYI3 381 aa28.59■■■□□ 2.17
CPNE7-208ENST00000566398 CHGAP10645 457 aaKnown RBP28.58■■■□□ 2.17
CPNE7-208ENST00000566398 TMEM131LA2VDJ0 1609 aa28.55■■■□□ 2.16
CPNE7-208ENST00000566398 ZFYVE9O95405 1425 aa28.55■■■□□ 2.16
CPNE7-208ENST00000566398 RIMS2Q9UQ26 1411 aa28.55■■■□□ 2.16
CPNE7-208ENST00000566398 TRIM52Q96A61 297 aa28.54■■■□□ 2.16
CPNE7-208ENST00000566398 PPP1R15AO75807 674 aaPredicted RBP28.53■■■□□ 2.16
CPNE7-208ENST00000566398 HDGFP51858 240 aaKnown RBP28.53■■■□□ 2.16
CPNE7-208ENST00000566398 BCANQ96GW7 911 aa28.51■■■□□ 2.15
CPNE7-208ENST00000566398 LRRC7Q96NW7 1537 aa28.5■■■□□ 2.15
CPNE7-208ENST00000566398 PLEKHG1Q9ULL1 1385 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms