RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 KDM5CP41229 1560 aa18.5■□□□□ 0.55
LINC00563-201ENST00000566370 ROCK2O75116 1388 aaKnown RBP18.49■□□□□ 0.55
LINC00563-201ENST00000566370 CFAP74Q9C0B2 1584 aa18.48■□□□□ 0.55
LINC00563-201ENST00000566370 EIF2AK4Q9P2K8 1649 aaKnown RBP18.48■□□□□ 0.55
LINC00563-201ENST00000566370 FANCAO15360 1455 aa18.48■□□□□ 0.55
LINC00563-201ENST00000566370 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
LINC00563-201ENST00000566370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.55
LINC00563-201ENST00000566370 ATP10AO60312 1499 aa18.47■□□□□ 0.55
LINC00563-201ENST00000566370 ZFYVE16Q7Z3T8 1539 aa18.46■□□□□ 0.55
LINC00563-201ENST00000566370 KANK1Q14678 1352 aa18.46■□□□□ 0.55
LINC00563-201ENST00000566370 CARD11Q9BXL7 1154 aa18.46■□□□□ 0.55
LINC00563-201ENST00000566370 TRAPPC8Q9Y2L5 1435 aa18.45■□□□□ 0.54
LINC00563-201ENST00000566370 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
LINC00563-201ENST00000566370 DCAF11Q8TEB1 546 aa18.44■□□□□ 0.54
LINC00563-201ENST00000566370 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
LINC00563-201ENST00000566370 INO80Q9ULG1 1556 aaPredicted RBP18.43■□□□□ 0.54
LINC00563-201ENST00000566370 ADGRL1O94910 1474 aa18.43■□□□□ 0.54
LINC00563-201ENST00000566370 ASXL2Q76L83 1435 aa18.43■□□□□ 0.54
LINC00563-201ENST00000566370 LAMC1P11047 1609 aa18.41■□□□□ 0.54
LINC00563-201ENST00000566370 NEFLP07196 543 aa18.4■□□□□ 0.54
LINC00563-201ENST00000566370 DEPDC5O75140 1603 aa18.4■□□□□ 0.54
LINC00563-201ENST00000566370 TRPM1Q7Z4N2 1603 aa18.4■□□□□ 0.54
LINC00563-201ENST00000566370 KDM2AQ9Y2K7 1162 aa18.4■□□□□ 0.54
LINC00563-201ENST00000566370 STAC3Q96MF2 364 aa18.39■□□□□ 0.53
LINC00563-201ENST00000566370 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
LINC00563-201ENST00000566370 TET3O43151 1660 aa18.38■□□□□ 0.53
LINC00563-201ENST00000566370 PRAG1Q86YV5 1406 aa18.38■□□□□ 0.53
LINC00563-201ENST00000566370 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
LINC00563-201ENST00000566370 SCAPERQ9BY12 1400 aa18.36■□□□□ 0.53
LINC00563-201ENST00000566370 BCORL1Q5H9F3 1711 aa18.35■□□□□ 0.53
LINC00563-201ENST00000566370 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
LINC00563-201ENST00000566370 TRPM2O94759 1503 aa18.35■□□□□ 0.53
LINC00563-201ENST00000566370 ZNF518AQ6AHZ1 1483 aa18.35■□□□□ 0.53
LINC00563-201ENST00000566370 SPHKAPQ2M3C7 1700 aa18.35■□□□□ 0.53
LINC00563-201ENST00000566370 A2MP01023 1474 aa18.34■□□□□ 0.53
LINC00563-201ENST00000566370 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
LINC00563-201ENST00000566370 E9PCH4 1651 aa18.33■□□□□ 0.53
LINC00563-201ENST00000566370 KTN1Q86UP2 1357 aaKnown RBP18.33■□□□□ 0.52
LINC00563-201ENST00000566370 CEP152O94986 1710 aa18.33■□□□□ 0.52
LINC00563-201ENST00000566370 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
LINC00563-201ENST00000566370 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
LINC00563-201ENST00000566370 GPRASP1Q5JY77 1395 aa18.32■□□□□ 0.52
LINC00563-201ENST00000566370 MRS2Q9HD23 443 aa18.32■□□□□ 0.52
LINC00563-201ENST00000566370 SUPT16HQ9Y5B9 1047 aaKnown RBP18.32■□□□□ 0.52
LINC00563-201ENST00000566370 DHX29Q7Z478 1369 aaKnown RBP18.31■□□□□ 0.52
LINC00563-201ENST00000566370 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC00563-201ENST00000566370 RGL3Q3MIN7 710 aa18.31■□□□□ 0.52
LINC00563-201ENST00000566370 PRDM15P57071 1507 aaPredicted RBP18.31■□□□□ 0.52
LINC00563-201ENST00000566370 VWDEQ8N2E2 1590 aa18.29■□□□□ 0.52
LINC00563-201ENST00000566370 NEURL4Q96JN8 1562 aa18.28■□□□□ 0.52
LINC00563-201ENST00000566370 CD109Q6YHK3 1445 aa18.28■□□□□ 0.52
LINC00563-201ENST00000566370 PTPRTO14522 1441 aa18.27■□□□□ 0.52
LINC00563-201ENST00000566370 ST20-MTHFSA0A0A6YYL1 179 aa18.26■□□□□ 0.51
LINC00563-201ENST00000566370 RNF17Q9BXT8 1623 aaKnown RBP18.26■□□□□ 0.51
LINC00563-201ENST00000566370 KIF3BO15066 747 aa18.25■□□□□ 0.51
LINC00563-201ENST00000566370 KIDINS220Q9ULH0 1771 aa18.25■□□□□ 0.51
LINC00563-201ENST00000566370 NEO1Q92859 1461 aa18.24■□□□□ 0.51
LINC00563-201ENST00000566370 HECW2Q9P2P5 1572 aa18.23■□□□□ 0.51
LINC00563-201ENST00000566370 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
LINC00563-201ENST00000566370 CLTCL1P53675 1640 aa18.22■□□□□ 0.51
LINC00563-201ENST00000566370 RALBP1Q15311 655 aa18.22■□□□□ 0.51
LINC00563-201ENST00000566370 LMTK2Q8IWU2 1503 aa18.22■□□□□ 0.51
LINC00563-201ENST00000566370 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
LINC00563-201ENST00000566370 MADDQ8WXG6 1647 aa18.21■□□□□ 0.51
LINC00563-201ENST00000566370 EFCAB6Q5THR3 1501 aa18.21■□□□□ 0.51
LINC00563-201ENST00000566370 KIF1BO60333 1816 aa18.2■□□□□ 0.5
LINC00563-201ENST00000566370 KIAA1210Q9ULL0 1709 aa18.2■□□□□ 0.5
LINC00563-201ENST00000566370 SLC24A1O60721 1099 aa18.2■□□□□ 0.5
LINC00563-201ENST00000566370 TMF1P82094 1093 aa18.2■□□□□ 0.5
LINC00563-201ENST00000566370 COL17A1Q9UMD9 1497 aaPredicted RBP18.2■□□□□ 0.5
LINC00563-201ENST00000566370 EIF3AQ14152 1382 aaKnown RBP18.19■□□□□ 0.5
LINC00563-201ENST00000566370 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
LINC00563-201ENST00000566370 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
LINC00563-201ENST00000566370 MROH1Q8NDA8 1641 aa18.18■□□□□ 0.5
LINC00563-201ENST00000566370 FKBP8Q14318 412 aa18.18■□□□□ 0.5
LINC00563-201ENST00000566370 CDCA8Q53HL2 280 aa18.18■□□□□ 0.5
LINC00563-201ENST00000566370 WASHC2CQ9Y4E1 1318 aa18.17■□□□□ 0.5
LINC00563-201ENST00000566370 IQGAP1P46940 1657 aa18.15■□□□□ 0.5
LINC00563-201ENST00000566370 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
LINC00563-201ENST00000566370 TMC1Q8TDI8 760 aa18.15■□□□□ 0.5
LINC00563-201ENST00000566370 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.5
LINC00563-201ENST00000566370 MYOM2P54296 1465 aa18.14■□□□□ 0.5
LINC00563-201ENST00000566370 NBPF1Q3BBV0 1214 aa18.14■□□□□ 0.49
LINC00563-201ENST00000566370 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
LINC00563-201ENST00000566370 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
LINC00563-201ENST00000566370 ERICH6BQ5W0A0 696 aa18.12■□□□□ 0.49
LINC00563-201ENST00000566370 GLI2P10070 1586 aa18.1■□□□□ 0.49
LINC00563-201ENST00000566370 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
LINC00563-201ENST00000566370 MAP3K4Q9Y6R4 1608 aa18.1■□□□□ 0.49
LINC00563-201ENST00000566370 ABCA6Q8N139 1617 aa18.08■□□□□ 0.49
LINC00563-201ENST00000566370 ZC3H13Q5T200 1668 aaKnown RBP18.08■□□□□ 0.49
LINC00563-201ENST00000566370 IFT172Q9UG01 1749 aa18.07■□□□□ 0.48
LINC00563-201ENST00000566370 NLRP13Q86W25 1043 aa18.06■□□□□ 0.48
LINC00563-201ENST00000566370 TESK2Q96S53 571 aa18.06■□□□□ 0.48
LINC00563-201ENST00000566370 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
LINC00563-201ENST00000566370 FRMPD1Q5SYB0 1578 aa18.05■□□□□ 0.48
LINC00563-201ENST00000566370 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
LINC00563-201ENST00000566370 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
LINC00563-201ENST00000566370 ADGRB3O60242 1522 aa18.04■□□□□ 0.48
LINC00563-201ENST00000566370 SYNMO15061 1565 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms