RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 SCAPERQ9BY12 1400 aa12.83□□□□□ -0.36
LSM3P5-201ENST00000566307 ZNF316A6NFI3 1004 aaPredicted RBP12.83□□□□□ -0.36
LSM3P5-201ENST00000566307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
LSM3P5-201ENST00000566307 RPRD2Q5VT52 1461 aaKnown RBP12.83□□□□□ -0.36
LSM3P5-201ENST00000566307 ZNF518AQ6AHZ1 1483 aa12.83□□□□□ -0.36
LSM3P5-201ENST00000566307 ATP7AQ04656 1500 aa12.83□□□□□ -0.36
LSM3P5-201ENST00000566307 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
LSM3P5-201ENST00000566307 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
LSM3P5-201ENST00000566307 IQGAP3Q86VI3 1631 aa12.81□□□□□ -0.36
LSM3P5-201ENST00000566307 EIF2AK4Q9P2K8 1649 aaKnown RBP12.81□□□□□ -0.36
LSM3P5-201ENST00000566307 PPP1R15AO75807 674 aaPredicted RBP12.81□□□□□ -0.36
LSM3P5-201ENST00000566307 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
LSM3P5-201ENST00000566307 POGZQ7Z3K3 1410 aa12.8□□□□□ -0.36
LSM3P5-201ENST00000566307 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
LSM3P5-201ENST00000566307 CYB5RLQ6IPT4 315 aa12.8□□□□□ -0.36
LSM3P5-201ENST00000566307 NUP155O75694 1391 aa12.8□□□□□ -0.36
LSM3P5-201ENST00000566307 FAM135AQ9P2D6 1515 aa12.79□□□□□ -0.36
LSM3P5-201ENST00000566307 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
LSM3P5-201ENST00000566307 DEPDC5O75140 1603 aa12.79□□□□□ -0.36
LSM3P5-201ENST00000566307 KIDINS220Q9ULH0 1771 aa12.77□□□□□ -0.36
LSM3P5-201ENST00000566307 ATP10AO60312 1499 aa12.77□□□□□ -0.37
LSM3P5-201ENST00000566307 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
LSM3P5-201ENST00000566307 NEUROD1Q13562 356 aa12.76□□□□□ -0.37
LSM3P5-201ENST00000566307 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
LSM3P5-201ENST00000566307 DHX29Q7Z478 1369 aaKnown RBP12.76□□□□□ -0.37
LSM3P5-201ENST00000566307 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
LSM3P5-201ENST00000566307 VWDEQ8N2E2 1590 aa12.76□□□□□ -0.37
LSM3P5-201ENST00000566307 PKD2Q13563 968 aa12.75□□□□□ -0.37
LSM3P5-201ENST00000566307 HECW2Q9P2P5 1572 aa12.75□□□□□ -0.37
LSM3P5-201ENST00000566307 PRDM15P57071 1507 aaPredicted RBP12.73□□□□□ -0.37
LSM3P5-201ENST00000566307 RNF17Q9BXT8 1623 aaKnown RBP12.72□□□□□ -0.37
LSM3P5-201ENST00000566307 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
LSM3P5-201ENST00000566307 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
LSM3P5-201ENST00000566307 LMTK2Q8IWU2 1503 aa12.71□□□□□ -0.38
LSM3P5-201ENST00000566307 A2MP01023 1474 aa12.7□□□□□ -0.38
LSM3P5-201ENST00000566307 TET3O43151 1660 aa12.7□□□□□ -0.38
LSM3P5-201ENST00000566307 PPRC1Q5VV67 1664 aaKnown RBP12.7□□□□□ -0.38
LSM3P5-201ENST00000566307 MROH1Q8NDA8 1641 aa12.7□□□□□ -0.38
LSM3P5-201ENST00000566307 UHRF1BP1Q6BDS2 1440 aa12.68□□□□□ -0.38
LSM3P5-201ENST00000566307 FRMPD1Q5SYB0 1578 aa12.68□□□□□ -0.38
LSM3P5-201ENST00000566307 KANK1Q14678 1352 aa12.68□□□□□ -0.38
LSM3P5-201ENST00000566307 DIEXFQ68CQ4 756 aaKnown RBP12.67□□□□□ -0.38
LSM3P5-201ENST00000566307 NEURL4Q96JN8 1562 aa12.67□□□□□ -0.38
LSM3P5-201ENST00000566307 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 PLA2R1Q13018 1463 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 REREQ9P2R6 1566 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 DIP2CQ9Y2E4 1556 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 PTPRTO14522 1441 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 KIF13AQ9H1H9 1805 aa12.66□□□□□ -0.38
LSM3P5-201ENST00000566307 E9PCH4 1651 aa12.64□□□□□ -0.39
LSM3P5-201ENST00000566307 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
LSM3P5-201ENST00000566307 TRPM2O94759 1503 aa12.64□□□□□ -0.39
LSM3P5-201ENST00000566307 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
LSM3P5-201ENST00000566307 KIF3BO15066 747 aa12.61□□□□□ -0.39
LSM3P5-201ENST00000566307 STAC3Q96MF2 364 aa12.61□□□□□ -0.39
LSM3P5-201ENST00000566307 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
LSM3P5-201ENST00000566307 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
LSM3P5-201ENST00000566307 AGLP35573 1532 aa12.6□□□□□ -0.39
LSM3P5-201ENST00000566307 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
LSM3P5-201ENST00000566307 RALGAPBQ86X10 1494 aa12.59□□□□□ -0.39
LSM3P5-201ENST00000566307 RAPGEF3O95398 923 aa12.58□□□□□ -0.4
LSM3P5-201ENST00000566307 ARHGAP31Q2M1Z3 1444 aa12.58□□□□□ -0.4
LSM3P5-201ENST00000566307 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
LSM3P5-201ENST00000566307 CEP152O94986 1710 aa12.57□□□□□ -0.4
LSM3P5-201ENST00000566307 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
LSM3P5-201ENST00000566307 ABCC3O15438 1527 aa12.57□□□□□ -0.4
LSM3P5-201ENST00000566307 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
LSM3P5-201ENST00000566307 LAMC1P11047 1609 aa12.55□□□□□ -0.4
LSM3P5-201ENST00000566307 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
LSM3P5-201ENST00000566307 TSPOAP1O95153 1857 aa12.55□□□□□ -0.4
LSM3P5-201ENST00000566307 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
LSM3P5-201ENST00000566307 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
LSM3P5-201ENST00000566307 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
LSM3P5-201ENST00000566307 ARHGEF40Q8TER5 1519 aa12.54□□□□□ -0.4
LSM3P5-201ENST00000566307 CLTCL1P53675 1640 aa12.54□□□□□ -0.4
LSM3P5-201ENST00000566307 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
LSM3P5-201ENST00000566307 CAMSAP1Q5T5Y3 1602 aa12.53□□□□□ -0.4
LSM3P5-201ENST00000566307 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
LSM3P5-201ENST00000566307 NOS1P29475 1434 aa12.52□□□□□ -0.41
LSM3P5-201ENST00000566307 NPATQ14207 1427 aa12.52□□□□□ -0.41
LSM3P5-201ENST00000566307 TRPM1Q7Z4N2 1603 aa12.51□□□□□ -0.41
LSM3P5-201ENST00000566307 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
LSM3P5-201ENST00000566307 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
LSM3P5-201ENST00000566307 COL17A1Q9UMD9 1497 aaPredicted RBP12.5□□□□□ -0.41
LSM3P5-201ENST00000566307 MYOM2P54296 1465 aa12.49□□□□□ -0.41
LSM3P5-201ENST00000566307 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
LSM3P5-201ENST00000566307 KIF1BO60333 1816 aa12.48□□□□□ -0.41
LSM3P5-201ENST00000566307 KIAA1210Q9ULL0 1709 aa12.48□□□□□ -0.41
LSM3P5-201ENST00000566307 PIK3C2BO00750 1634 aa12.48□□□□□ -0.41
LSM3P5-201ENST00000566307 ADGRB3O60242 1522 aa12.48□□□□□ -0.41
LSM3P5-201ENST00000566307 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
LSM3P5-201ENST00000566307 MADDQ8WXG6 1647 aa12.48□□□□□ -0.41
LSM3P5-201ENST00000566307 WASHC2CQ9Y4E1 1318 aa12.47□□□□□ -0.41
LSM3P5-201ENST00000566307 USP47Q96K76 1375 aa12.46□□□□□ -0.41
LSM3P5-201ENST00000566307 IFT172Q9UG01 1749 aa12.46□□□□□ -0.41
LSM3P5-201ENST00000566307 GGT6Q6P531 493 aa12.46□□□□□ -0.41
LSM3P5-201ENST00000566307 NRXN1Q9ULB1 1477 aa12.46□□□□□ -0.42
LSM3P5-201ENST00000566307 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms