RNA–Protein interactions for RNA: ENST00000566243.5

EDC3-211, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-211ENST00000566243 NCOA1Q15788 1441 aa29.33■■■□□ 2.29
EDC3-211ENST00000566243 MROH2AA6NES4 1674 aa29.33■■■□□ 2.29
EDC3-211ENST00000566243 PTPRKQ15262 1439 aa29.31■■■□□ 2.28
EDC3-211ENST00000566243 WASHC2CQ9Y4E1 1318 aa29.3■■■□□ 2.28
EDC3-211ENST00000566243 ADGRL2O95490 1459 aa29.29■■■□□ 2.28
EDC3-211ENST00000566243 NPATQ14207 1427 aa29.29■■■□□ 2.28
EDC3-211ENST00000566243 ERBINQ96RT1 1412 aa29.29■■■□□ 2.28
EDC3-211ENST00000566243 KDM5DQ9BY66 1539 aa29.29■■■□□ 2.28
EDC3-211ENST00000566243 EIF2AK4Q9P2K8 1649 aaKnown RBP29.28■■■□□ 2.28
EDC3-211ENST00000566243 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
EDC3-211ENST00000566243 RNF17Q9BXT8 1623 aaKnown RBP29.27■■■□□ 2.28
EDC3-211ENST00000566243 FAM135AQ9P2D6 1515 aa29.26■■■□□ 2.27
EDC3-211ENST00000566243 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
EDC3-211ENST00000566243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.25■■■□□ 2.272e-11■□□□□ 9.6
EDC3-211ENST00000566243 MROH1Q8NDA8 1641 aa29.24■■■□□ 2.27
EDC3-211ENST00000566243 ABCC3O15438 1527 aa29.21■■■□□ 2.27
EDC3-211ENST00000566243 RRBP1Q9P2E9 1410 aaKnown RBP29.2■■■□□ 2.27
EDC3-211ENST00000566243 ITGAEP38570 1179 aa29.2■■■□□ 2.26
EDC3-211ENST00000566243 FBXO31Q5XUX0 539 aaPredicted RBP29.2■■■□□ 2.26
EDC3-211ENST00000566243 PZPP20742 1482 aa29.18■■■□□ 2.26
EDC3-211ENST00000566243 SETD1BQ9UPS6 1966 aaKnown RBP29.17■■■□□ 2.26
EDC3-211ENST00000566243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.16■■■□□ 2.263e-7■■□□□ 13.1
EDC3-211ENST00000566243 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
EDC3-211ENST00000566243 ROCK1Q13464 1354 aa29.15■■■□□ 2.26
EDC3-211ENST00000566243 ANKRD50Q9ULJ7 1429 aa29.15■■■□□ 2.26
EDC3-211ENST00000566243 DEPDC5O75140 1603 aa29.11■■■□□ 2.25
EDC3-211ENST00000566243 TNRQ92752 1358 aa29.11■■■□□ 2.25
EDC3-211ENST00000566243 ZC3H13Q5T200 1668 aaKnown RBP29.1■■■□□ 2.25
EDC3-211ENST00000566243 MYO3AQ8NEV4 1616 aa29.08■■■□□ 2.25
EDC3-211ENST00000566243 KANK1Q14678 1352 aa29.07■■■□□ 2.24
EDC3-211ENST00000566243 CEP152O94986 1710 aa29.05■■■□□ 2.24
EDC3-211ENST00000566243 VWDEQ8N2E2 1590 aa29.05■■■□□ 2.24
EDC3-211ENST00000566243 CEP170BQ9Y4F5 1589 aaPredicted RBP29.04■■■□□ 2.24
EDC3-211ENST00000566243 CAMSAP1Q5T5Y3 1602 aa29.03■■■□□ 2.24
EDC3-211ENST00000566243 ERVK-7P63135 1459 aa29.03■■■□□ 2.24
EDC3-211ENST00000566243 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
EDC3-211ENST00000566243 LMTK2Q8IWU2 1503 aa29.02■■■□□ 2.24
EDC3-211ENST00000566243 A2ML1A8K2U0 1454 aa29.01■■■□□ 2.23
EDC3-211ENST00000566243 SPATA31D1Q6ZQQ2 1576 aa29.01■■■□□ 2.23
EDC3-211ENST00000566243 ZNF142P52746 1687 aaPredicted RBP28.99■■■□□ 2.23
EDC3-211ENST00000566243 STRCQ7RTU9 1775 aa28.96■■■□□ 2.23
EDC3-211ENST00000566243 NLRP1Q9C000 1473 aa28.96■■■□□ 2.23
EDC3-211ENST00000566243 NCKAP5LQ9HCH0 1330 aa28.93■■■□□ 2.22
EDC3-211ENST00000566243 DMRT2Q9Y5R5 561 aa28.92■■■□□ 2.22
EDC3-211ENST00000566243 UNC13BO14795 1591 aa28.92■■■□□ 2.22
EDC3-211ENST00000566243 PLA2R1Q13018 1463 aa28.91■■■□□ 2.22
EDC3-211ENST00000566243 EFCAB6Q5THR3 1501 aa28.9■■■□□ 2.22
EDC3-211ENST00000566243 NAIPQ13075 1403 aa28.89■■■□□ 2.22
EDC3-211ENST00000566243 PTPRTO14522 1441 aa28.88■■■□□ 2.21
EDC3-211ENST00000566243 NUP155O75694 1391 aa28.87■■■□□ 2.21
EDC3-211ENST00000566243 PKD2Q13563 968 aa28.86■■■□□ 2.21
EDC3-211ENST00000566243 UGGT1Q9NYU2 1555 aa28.86■■■□□ 2.21
EDC3-211ENST00000566243 THEMISQ8N1K5 641 aaPredicted RBP28.85■■■□□ 2.21
EDC3-211ENST00000566243 NOS1P29475 1434 aa28.85■■■□□ 2.21
EDC3-211ENST00000566243 HFM1A2PYH4 1435 aa28.83■■■□□ 2.21
EDC3-211ENST00000566243 RPRD2Q5VT52 1461 aaKnown RBP28.81■■■□□ 2.2
EDC3-211ENST00000566243 TET3O43151 1660 aa28.8■■■□□ 2.2
EDC3-211ENST00000566243 CFAP65Q6ZU64 1925 aaKnown RBP28.79■■■□□ 2.2
EDC3-211ENST00000566243 IQGAP3Q86VI3 1631 aa28.79■■■□□ 2.2
EDC3-211ENST00000566243 SYNMO15061 1565 aa28.79■■■□□ 2.2
EDC3-211ENST00000566243 IDI1Q13907 227 aa28.78■■■□□ 2.2
EDC3-211ENST00000566243 ANKLE2Q86XL3 938 aa28.76■■■□□ 2.19
EDC3-211ENST00000566243 GCC2Q8IWJ2 1684 aa28.75■■■□□ 2.19
EDC3-211ENST00000566243 NEURL4Q96JN8 1562 aa28.72■■■□□ 2.19
EDC3-211ENST00000566243 SLC52A1Q9NWF4 448 aa28.72■■■□□ 2.19
EDC3-211ENST00000566243 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
EDC3-211ENST00000566243 PIK3C2BO00750 1634 aa28.71■■■□□ 2.19
EDC3-211ENST00000566243 STAG3Q9UJ98 1225 aa28.69■■■□□ 2.18
EDC3-211ENST00000566243 E9PCH4 1651 aa28.69■■■□□ 2.18
EDC3-211ENST00000566243 ARHGAP23Q9P227 1491 aa28.67■■■□□ 2.18
EDC3-211ENST00000566243 CERKQ8TCT0 537 aa28.67■■■□□ 2.18
EDC3-211ENST00000566243 LTKP29376 864 aa28.66■■■□□ 2.18
EDC3-211ENST00000566243 TRIM52Q96A61 297 aa28.66■■■□□ 2.18
EDC3-211ENST00000566243 MED14O60244 1454 aa28.66■■■□□ 2.18
EDC3-211ENST00000566243 TMEM2Q9UHN6 1383 aa28.65■■■□□ 2.18
EDC3-211ENST00000566243 SLIT1O75093 1534 aa28.65■■■□□ 2.18
EDC3-211ENST00000566243 NPHP4O75161 1426 aaPredicted RBP28.65■■■□□ 2.18
EDC3-211ENST00000566243 ZNF335Q9H4Z2 1342 aaPredicted RBP28.65■■■□□ 2.18
EDC3-211ENST00000566243 POLR1AO95602 1720 aaPredicted RBP28.64■■■□□ 2.18
EDC3-211ENST00000566243 ILDR1Q86SU0 546 aaPredicted RBP28.64■■■□□ 2.18
EDC3-211ENST00000566243 TXNDC2Q86VQ3 553 aa28.63■■■□□ 2.17
EDC3-211ENST00000566243 ADGRB3O60242 1522 aa28.63■■■□□ 2.17
EDC3-211ENST00000566243 LTBP4Q8N2S1 1624 aa28.62■■■□□ 2.17
EDC3-211ENST00000566243 SCAF11Q99590 1463 aaKnown RBP28.61■■■□□ 2.17
EDC3-211ENST00000566243 KDM5AP29375 1690 aaKnown RBP28.58■■■□□ 2.17
EDC3-211ENST00000566243 EID1Q9Y6B2 187 aa28.58■■■□□ 2.17
EDC3-211ENST00000566243 FBXO41Q8TF61 875 aa28.56■■■□□ 2.16
EDC3-211ENST00000566243 SLC4A1APQ9BWU0 796 aaKnown RBP28.55■■■□□ 2.16
EDC3-211ENST00000566243 CHGAP10645 457 aaKnown RBP28.54■■■□□ 2.16
EDC3-211ENST00000566243 SETD5Q9C0A6 1442 aa28.53■■■□□ 2.16
EDC3-211ENST00000566243 IQGAP1P46940 1657 aa28.52■■■□□ 2.16
EDC3-211ENST00000566243 TMEM131LA2VDJ0 1609 aa28.52■■■□□ 2.16
EDC3-211ENST00000566243 ZFYVE9O95405 1425 aa28.5■■■□□ 2.15
EDC3-211ENST00000566243 RIMS2Q9UQ26 1411 aa28.48■■■□□ 2.15
EDC3-211ENST00000566243 SPHKAPQ2M3C7 1700 aa28.46■■■□□ 2.15
EDC3-211ENST00000566243 TRPM2O94759 1503 aa28.46■■■□□ 2.15
EDC3-211ENST00000566243 FOXD1Q16676 465 aa28.45■■■□□ 2.14
EDC3-211ENST00000566243 MPHOSPH9Q99550 1183 aa28.45■■■□□ 2.14
EDC3-211ENST00000566243 RAB3GAP2Q9H2M9 1393 aa28.45■■■□□ 2.14
EDC3-211ENST00000566243 NUTM2DQ5VT03 806 aaPredicted RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms