RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
SNX29-205ENST00000566228 MTERF4Q7Z6M4 381 aaKnown RBP13.13□□□□□ -0.31
SNX29-205ENST00000566228 PATL2C9JE40 543 aaKnown RBP13.13□□□□□ -0.31
SNX29-205ENST00000566228 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
SNX29-205ENST00000566228 EZRP15311 586 aaKnown RBP13.13□□□□□ -0.31
SNX29-205ENST00000566228 SRPK2P78362 688 aaKnown RBP13.12□□□□□ -0.31
SNX29-205ENST00000566228 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
SNX29-205ENST00000566228 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
SNX29-205ENST00000566228 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
SNX29-205ENST00000566228 EIF3AQ14152 1382 aaKnown RBP13.11□□□□□ -0.31
SNX29-205ENST00000566228 NACADO15069 1562 aa13.11□□□□□ -0.31
SNX29-205ENST00000566228 TXLNBQ8N3L3 684 aa13.1□□□□□ -0.31
SNX29-205ENST00000566228 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
SNX29-205ENST00000566228 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
SNX29-205ENST00000566228 CHMP3Q9Y3E7 222 aa13.1□□□□□ -0.31
SNX29-205ENST00000566228 ZNF771Q7L3S4 317 aaPredicted RBP13.1□□□□□ -0.31
SNX29-205ENST00000566228 CLIP1P30622 1438 aa13.1□□□□□ -0.31
SNX29-205ENST00000566228 EPS15P42566 896 aa13.1□□□□□ -0.31
SNX29-205ENST00000566228 PHLDB1Q86UU1 1377 aa13.1□□□□□ -0.31
SNX29-205ENST00000566228 ERLIN2O94905 339 aa13.09□□□□□ -0.31
SNX29-205ENST00000566228 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
SNX29-205ENST00000566228 PAF1Q8N7H5 531 aa13.09□□□□□ -0.31
SNX29-205ENST00000566228 MORC1Q86VD1 984 aa13.08□□□□□ -0.32
SNX29-205ENST00000566228 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
SNX29-205ENST00000566228 DESP17661 470 aa13.08□□□□□ -0.32
SNX29-205ENST00000566228 RGL3Q3MIN7 710 aa13.08□□□□□ -0.32
SNX29-205ENST00000566228 TRIM21P19474 475 aaKnown RBP13.07□□□□□ -0.32
SNX29-205ENST00000566228 DNAI2Q9GZS0 605 aa13.07□□□□□ -0.32
SNX29-205ENST00000566228 LUC7LQ9NQ29 371 aaKnown RBP13.07□□□□□ -0.32
SNX29-205ENST00000566228 EEA1Q15075 1411 aa13.07□□□□□ -0.32
SNX29-205ENST00000566228 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
SNX29-205ENST00000566228 H0YHG0 523 aa13.07□□□□□ -0.32
SNX29-205ENST00000566228 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
SNX29-205ENST00000566228 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
SNX29-205ENST00000566228 TOMM22Q9NS69 142 aa13.05□□□□□ -0.32
SNX29-205ENST00000566228 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
SNX29-205ENST00000566228 NAT10Q9H0A0 1025 aaKnown RBP13.05□□□□□ -0.32
SNX29-205ENST00000566228 CCP110O43303 1012 aa13.05□□□□□ -0.32
SNX29-205ENST00000566228 APPP05067 770 aa13.04□□□□□ -0.32
SNX29-205ENST00000566228 OFD1O75665 1012 aa13.04□□□□□ -0.32
SNX29-205ENST00000566228 CHMP5Q9NZZ3 219 aa13.04□□□□□ -0.32
SNX29-205ENST00000566228 CCDC66A2RUB6 948 aa13.04□□□□□ -0.32
SNX29-205ENST00000566228 RABEP1Q15276 862 aa13.04□□□□□ -0.32
SNX29-205ENST00000566228 KTN1Q86UP2 1357 aaKnown RBP13.03□□□□□ -0.32
SNX29-205ENST00000566228 BAZ1BQ9UIG0 1483 aaKnown RBP13.03□□□□□ -0.32
SNX29-205ENST00000566228 HOMER1Q86YM7 354 aa13.03□□□□□ -0.32
SNX29-205ENST00000566228 TRDNQ13061 729 aa13.03□□□□□ -0.32
SNX29-205ENST00000566228 SEPT7Q16181 437 aaKnown RBP13.03□□□□□ -0.32
SNX29-205ENST00000566228 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
SNX29-205ENST00000566228 SAFBQ15424 915 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNX29-205ENST00000566228 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
SNX29-205ENST00000566228 ERICH2A1L162 156 aa13.02□□□□□ -0.32
SNX29-205ENST00000566228 DEKP35659 375 aaKnown RBP13.02□□□□□ -0.32
SNX29-205ENST00000566228 USP8P40818 1118 aa13.02□□□□□ -0.32
SNX29-205ENST00000566228 FOXD1Q16676 465 aa13.02□□□□□ -0.33
SNX29-205ENST00000566228 CCDC112Q8NEF3 446 aa13.02□□□□□ -0.33
SNX29-205ENST00000566228 XBP1P17861 261 aa13.02□□□□□ -0.33
SNX29-205ENST00000566228 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
SNX29-205ENST00000566228 RNF20Q5VTR2 975 aa13.01□□□□□ -0.33
SNX29-205ENST00000566228 GOLGA6L10A6NI86 522 aa13.01□□□□□ -0.33
SNX29-205ENST00000566228 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
SNX29-205ENST00000566228 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
SNX29-205ENST00000566228 ITPRIPQ8IWB1 547 aa13□□□□□ -0.33
SNX29-205ENST00000566228 HMGB1P09429 215 aaKnown RBP13□□□□□ -0.33
SNX29-205ENST00000566228 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
SNX29-205ENST00000566228 SYCP1Q15431 976 aa13□□□□□ -0.33
SNX29-205ENST00000566228 CEP162Q5TB80 1403 aa13□□□□□ -0.33
SNX29-205ENST00000566228 ZKSCAN1P17029 563 aaPredicted RBP13□□□□□ -0.33
SNX29-205ENST00000566228 NEFHP12036 1026 aa12.99□□□□□ -0.33
SNX29-205ENST00000566228 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
SNX29-205ENST00000566228 NAP1L1P55209 391 aaKnown RBP12.99□□□□□ -0.33
SNX29-205ENST00000566228 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
SNX29-205ENST00000566228 PPM1EQ8WY54 764 aa12.99□□□□□ -0.33
SNX29-205ENST00000566228 DIAPH3Q9NSV4 1193 aa12.99□□□□□ -0.33
SNX29-205ENST00000566228 CENPJQ9HC77 1338 aaPredicted RBP12.99□□□□□ -0.33
SNX29-205ENST00000566228 KIF3BO15066 747 aa12.99□□□□□ -0.33
SNX29-205ENST00000566228 TERF2IPQ9NYB0 399 aa12.99□□□□□ -0.33
SNX29-205ENST00000566228 ZCCHC6Q5VYS8 1495 aaKnown RBP12.99□□□□□ -0.33
SNX29-205ENST00000566228 ROCK1Q13464 1354 aa12.98□□□□□ -0.33
SNX29-205ENST00000566228 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
SNX29-205ENST00000566228 CPLX1O14810 134 aa12.98□□□□□ -0.33
SNX29-205ENST00000566228 REC8O95072 547 aa12.98□□□□□ -0.33
SNX29-205ENST00000566228 CCDC9Q9Y3X0 531 aaKnown RBP12.98□□□□□ -0.33
SNX29-205ENST00000566228 NF2P35240 595 aa12.97□□□□□ -0.33
SNX29-205ENST00000566228 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
SNX29-205ENST00000566228 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
SNX29-205ENST00000566228 GBP2P32456 591 aaPredicted RBP12.97□□□□□ -0.33
SNX29-205ENST00000566228 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
SNX29-205ENST00000566228 DEF6Q9H4E7 631 aa12.97□□□□□ -0.33
SNX29-205ENST00000566228 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
SNX29-205ENST00000566228 GZF1Q9H116 711 aaPredicted RBP12.97□□□□□ -0.33
SNX29-205ENST00000566228 RALBP1Q15311 655 aa12.96□□□□□ -0.33
SNX29-205ENST00000566228 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
SNX29-205ENST00000566228 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.34
SNX29-205ENST00000566228 STAMBPO95630 424 aa12.95□□□□□ -0.34
SNX29-205ENST00000566228 OLFM4Q6UX06 510 aa12.95□□□□□ -0.34
SNX29-205ENST00000566228 SPRYD3Q8NCJ5 442 aa12.95□□□□□ -0.34
SNX29-205ENST00000566228 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
SNX29-205ENST00000566228 EID1Q9Y6B2 187 aa12.95□□□□□ -0.34
SNX29-205ENST00000566228 KIF7Q2M1P5 1343 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms