RNA–Protein interactions for RNA: ENST00000566093.1

CNEP1R1-207, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-207ENST00000566093 EMILIN3Q9NT22 766 aa8.52□□□□□ -1.05
CNEP1R1-207ENST00000566093 MFSD10Q14728 455 aa8.51□□□□□ -1.05
CNEP1R1-207ENST00000566093 Q6ZNB5 142 aa8.5□□□□□ -1.05
CNEP1R1-207ENST00000566093 ZFRQ96KR1 1074 aaKnown RBP8.49□□□□□ -1.05
CNEP1R1-207ENST00000566093 RYDENQ9NUL5 291 aaKnown RBP8.49□□□□□ -1.05
CNEP1R1-207ENST00000566093 WBP1LQ9NX94 342 aa8.49□□□□□ -1.05
CNEP1R1-207ENST00000566093 ONECUT3O60422 494 aaPredicted RBP8.48□□□□□ -1.05
CNEP1R1-207ENST00000566093 MAP3K9P80192 1104 aa8.48□□□□□ -1.05
CNEP1R1-207ENST00000566093 NYAP1Q6ZVC0 841 aa8.48□□□□□ -1.05
CNEP1R1-207ENST00000566093 LARP6Q9BRS8 491 aaKnown RBP8.48□□□□□ -1.05
CNEP1R1-207ENST00000566093 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
CNEP1R1-207ENST00000566093 DDX27Q96GQ7 796 aaKnown RBP8.47□□□□□ -1.05
CNEP1R1-207ENST00000566093 KIAA1468Q9P260 1216 aa8.47□□□□□ -1.05
CNEP1R1-207ENST00000566093 GTPBP6O43824 516 aaPredicted RBP8.46□□□□□ -1.06
CNEP1R1-207ENST00000566093 PHF14O94880 888 aa8.46□□□□□ -1.06
CNEP1R1-207ENST00000566093 KCNC4Q03721 635 aa8.46□□□□□ -1.06
CNEP1R1-207ENST00000566093 TYW1BQ6NUM6 668 aa8.45□□□□□ -1.06
CNEP1R1-207ENST00000566093 FBXW7Q969H0 707 aa8.45□□□□□ -1.06
CNEP1R1-207ENST00000566093 C6orf132Q5T0Z8 1188 aa8.42□□□□□ -1.06
CNEP1R1-207ENST00000566093 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
CNEP1R1-207ENST00000566093 SEPT9Q9UHD8 586 aaPredicted RBP8.42□□□□□ -1.06
CNEP1R1-207ENST00000566093 LAPTM4AQ15012 233 aa8.41□□□□□ -1.06
CNEP1R1-207ENST00000566093 TRIM6-TRIM34B2RNG4 842 aa8.4□□□□□ -1.06
CNEP1R1-207ENST00000566093 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
CNEP1R1-207ENST00000566093 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
CNEP1R1-207ENST00000566093 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
CNEP1R1-207ENST00000566093 TRAF7Q6Q0C0 670 aa8.39□□□□□ -1.07
CNEP1R1-207ENST00000566093 TSR3Q9UJK0 312 aaKnown RBP8.39□□□□□ -1.07
CNEP1R1-207ENST00000566093 GFRA3O60609 400 aa8.37□□□□□ -1.07
CNEP1R1-207ENST00000566093 CAMK2BQ13554 666 aa8.37□□□□□ -1.07
CNEP1R1-207ENST00000566093 CADPS2Q86UW7 1296 aa8.37□□□□□ -1.07
CNEP1R1-207ENST00000566093 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
CNEP1R1-207ENST00000566093 EPAS1Q99814 870 aa8.37□□□□□ -1.07
CNEP1R1-207ENST00000566093 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.36□□□□□ -1.07
CNEP1R1-207ENST00000566093 HPS5Q9UPZ3 1129 aa8.36□□□□□ -1.07
CNEP1R1-207ENST00000566093 PLCB2Q00722 1185 aa8.35□□□□□ -1.07
CNEP1R1-207ENST00000566093 TJAP1Q5JTD0 557 aa8.35□□□□□ -1.07
CNEP1R1-207ENST00000566093 LRCH3Q96II8 777 aa8.34□□□□□ -1.07
CNEP1R1-207ENST00000566093 TSKSQ9UJT2 592 aa8.33□□□□□ -1.08
CNEP1R1-207ENST00000566093 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
CNEP1R1-207ENST00000566093 NRG2O14511 850 aaPredicted RBP8.3□□□□□ -1.08
CNEP1R1-207ENST00000566093 DPYSL4O14531 572 aa8.29□□□□□ -1.08
CNEP1R1-207ENST00000566093 RBM33Q96EV2 1170 aaKnown RBP8.29□□□□□ -1.08
CNEP1R1-207ENST00000566093 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
CNEP1R1-207ENST00000566093 FAM198AQ9UFP1 575 aa8.28□□□□□ -1.08
CNEP1R1-207ENST00000566093 V9GY48 417 aaPredicted RBP8.28□□□□□ -1.08
CNEP1R1-207ENST00000566093 C3orf80F5H4A9 247 aa8.27□□□□□ -1.09
CNEP1R1-207ENST00000566093 PPP4CP60510 307 aa8.27□□□□□ -1.09
CNEP1R1-207ENST00000566093 TSR1Q2NL82 804 aaKnown RBP8.27□□□□□ -1.09
CNEP1R1-207ENST00000566093 HAP1P54257 671 aaPredicted RBP8.26□□□□□ -1.09
CNEP1R1-207ENST00000566093 EN1Q05925 392 aaPredicted RBP8.26□□□□□ -1.09
CNEP1R1-207ENST00000566093 PACS2Q86VP3 889 aa8.26□□□□□ -1.09
CNEP1R1-207ENST00000566093 DDX12PQ92771 950 aa8.26□□□□□ -1.09
CNEP1R1-207ENST00000566093 TSHZ2Q9NRE2 1034 aa8.26□□□□□ -1.09
CNEP1R1-207ENST00000566093 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
CNEP1R1-207ENST00000566093 MTRQ99707 1265 aa8.25□□□□□ -1.09
CNEP1R1-207ENST00000566093 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
CNEP1R1-207ENST00000566093 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
CNEP1R1-207ENST00000566093 SMAPO00193 183 aa8.23□□□□□ -1.09
CNEP1R1-207ENST00000566093 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.23□□□□□ -1.09
CNEP1R1-207ENST00000566093 PRIM1P49642 420 aaKnown RBP8.22□□□□□ -1.09
CNEP1R1-207ENST00000566093 CDCA7LQ96GN5 454 aa8.22□□□□□ -1.09
CNEP1R1-207ENST00000566093 ZNF787Q6DD87 383 aa8.21□□□□□ -1.1
CNEP1R1-207ENST00000566093 PRSS12P56730 875 aa8.2□□□□□ -1.1
CNEP1R1-207ENST00000566093 NKX2-3Q8TAU0 364 aa8.2□□□□□ -1.1
CNEP1R1-207ENST00000566093 ZNF775Q96BV0 537 aaPredicted RBP8.2□□□□□ -1.1
CNEP1R1-207ENST00000566093 MAP3K7O43318 606 aa8.19□□□□□ -1.1
CNEP1R1-207ENST00000566093 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
CNEP1R1-207ENST00000566093 APLP1P51693 650 aa8.19□□□□□ -1.1
CNEP1R1-207ENST00000566093 NBR1Q14596 966 aa8.19□□□□□ -1.1
CNEP1R1-207ENST00000566093 PDIA6Q15084 440 aa8.19□□□□□ -1.1
CNEP1R1-207ENST00000566093 TATDN2Q93075 761 aa8.19□□□□□ -1.1
CNEP1R1-207ENST00000566093 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
CNEP1R1-207ENST00000566093 TRIM67Q6ZTA4 783 aa8.16□□□□□ -1.1
CNEP1R1-207ENST00000566093 CERKQ8TCT0 537 aa8.15□□□□□ -1.1
CNEP1R1-207ENST00000566093 EMID1Q96A84 441 aaPredicted RBP8.14□□□□□ -1.11
CNEP1R1-207ENST00000566093 PNMA3Q9UL41 463 aa8.14□□□□□ -1.11
CNEP1R1-207ENST00000566093 KDM2AQ9Y2K7 1162 aa8.14□□□□□ -1.11
CNEP1R1-207ENST00000566093 SPDYE16A6NNV3 312 aaPredicted RBP8.12□□□□□ -1.11
CNEP1R1-207ENST00000566093 NBPF26B4DH59 902 aa8.12□□□□□ -1.11
CNEP1R1-207ENST00000566093 TMUB1Q9BVT8 246 aa8.12□□□□□ -1.11
CNEP1R1-207ENST00000566093 NUDT18Q6ZVK8 323 aa8.11□□□□□ -1.11
CNEP1R1-207ENST00000566093 TTC13Q8NBP0 860 aa8.11□□□□□ -1.11
CNEP1R1-207ENST00000566093 VSIG10Q8N0Z9 540 aa8.1□□□□□ -1.11
CNEP1R1-207ENST00000566093 CDHR5Q9HBB8 845 aa8.09□□□□□ -1.11
CNEP1R1-207ENST00000566093 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
CNEP1R1-207ENST00000566093 ARIH1Q9Y4X5 557 aaPredicted RBP8.09□□□□□ -1.11
CNEP1R1-207ENST00000566093 POTECB2RU33 542 aa8.08□□□□□ -1.12
CNEP1R1-207ENST00000566093 OSBPP22059 807 aa8.08□□□□□ -1.12
CNEP1R1-207ENST00000566093 ZPR1O75312 459 aa8.07□□□□□ -1.12
CNEP1R1-207ENST00000566093 COPS2P61201 443 aa8.07□□□□□ -1.12
CNEP1R1-207ENST00000566093 MYT1Q01538 1121 aa8.07□□□□□ -1.12
CNEP1R1-207ENST00000566093 NPDC1Q9NQX5 325 aaPredicted RBP8.07□□□□□ -1.12
CNEP1R1-207ENST00000566093 GGCXP38435 758 aa8.06□□□□□ -1.12
CNEP1R1-207ENST00000566093 SWT1Q5T5J6 900 aaKnown RBP8.06□□□□□ -1.12
CNEP1R1-207ENST00000566093 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
CNEP1R1-207ENST00000566093 RNF223E7ERA6 249 aa8.05□□□□□ -1.12
CNEP1R1-207ENST00000566093 HDGFP51858 240 aaKnown RBP8.05□□□□□ -1.12
CNEP1R1-207ENST00000566093 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
CNEP1R1-207ENST00000566093 RNF40O75150 1001 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms