RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 AGLP35573 1532 aa20.23■□□□□ 0.83
GDPD3-203ENST00000565704 DEPDC5O75140 1603 aa20.22■□□□□ 0.83
GDPD3-203ENST00000565704 VWDEQ8N2E2 1590 aa20.21■□□□□ 0.83
GDPD3-203ENST00000565704 KIF3BO15066 747 aa20.21■□□□□ 0.83
GDPD3-203ENST00000565704 MPHOSPH9Q99550 1183 aa20.21■□□□□ 0.83
GDPD3-203ENST00000565704 NUP155O75694 1391 aa20.21■□□□□ 0.83
GDPD3-203ENST00000565704 MROH1Q8NDA8 1641 aa20.2■□□□□ 0.82
GDPD3-203ENST00000565704 RNF17Q9BXT8 1623 aaKnown RBP20.2■□□□□ 0.82
GDPD3-203ENST00000565704 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
GDPD3-203ENST00000565704 SIGLEC1Q9BZZ2 1709 aa20.18■□□□□ 0.82
GDPD3-203ENST00000565704 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
GDPD3-203ENST00000565704 PRDM15P57071 1507 aaPredicted RBP20.17■□□□□ 0.82
GDPD3-203ENST00000565704 IQGAP3Q86VI3 1631 aa20.16■□□□□ 0.82
GDPD3-203ENST00000565704 FAM135AQ9P2D6 1515 aa20.15■□□□□ 0.82
GDPD3-203ENST00000565704 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
GDPD3-203ENST00000565704 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
GDPD3-203ENST00000565704 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
GDPD3-203ENST00000565704 LMTK2Q8IWU2 1503 aa20.12■□□□□ 0.81
GDPD3-203ENST00000565704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.81
GDPD3-203ENST00000565704 PKD2Q13563 968 aa20.09■□□□□ 0.81
GDPD3-203ENST00000565704 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.81
GDPD3-203ENST00000565704 GGT6Q6P531 493 aa20.08■□□□□ 0.81
GDPD3-203ENST00000565704 KANK1Q14678 1352 aa20.08■□□□□ 0.8
GDPD3-203ENST00000565704 ABCC3O15438 1527 aa20.06■□□□□ 0.8
GDPD3-203ENST00000565704 FOXD1Q16676 465 aa20.05■□□□□ 0.8
GDPD3-203ENST00000565704 PLA2R1Q13018 1463 aa20.04■□□□□ 0.8
GDPD3-203ENST00000565704 TET3O43151 1660 aa20.03■□□□□ 0.8
GDPD3-203ENST00000565704 PTPRTO14522 1441 aa20.02■□□□□ 0.79
GDPD3-203ENST00000565704 ARHGAP31Q2M1Z3 1444 aa20.02■□□□□ 0.79
GDPD3-203ENST00000565704 WASHC2CQ9Y4E1 1318 aa20.02■□□□□ 0.79
GDPD3-203ENST00000565704 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
GDPD3-203ENST00000565704 E9PCH4 1651 aa20■□□□□ 0.79
GDPD3-203ENST00000565704 ZC3H13Q5T200 1668 aaKnown RBP19.98■□□□□ 0.79
GDPD3-203ENST00000565704 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
GDPD3-203ENST00000565704 NPATQ14207 1427 aa19.98■□□□□ 0.79
GDPD3-203ENST00000565704 CEP152O94986 1710 aa19.98■□□□□ 0.79
GDPD3-203ENST00000565704 RPRD2Q5VT52 1461 aaKnown RBP19.98■□□□□ 0.79
GDPD3-203ENST00000565704 ARID4BQ4LE39 1312 aaPredicted RBP19.96■□□□□ 0.79
GDPD3-203ENST00000565704 MLECQ14165 292 aa19.95■□□□□ 0.78
GDPD3-203ENST00000565704 CAMSAP1Q5T5Y3 1602 aa19.94■□□□□ 0.78
GDPD3-203ENST00000565704 NOS1P29475 1434 aa19.93■□□□□ 0.78
GDPD3-203ENST00000565704 CNTLNQ9NXG0 1405 aa19.92■□□□□ 0.78
GDPD3-203ENST00000565704 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
GDPD3-203ENST00000565704 TIMELESSQ9UNS1 1208 aa19.91■□□□□ 0.78
GDPD3-203ENST00000565704 ZMYM3Q14202 1370 aa19.91■□□□□ 0.78
GDPD3-203ENST00000565704 TRPM2O94759 1503 aa19.89■□□□□ 0.77
GDPD3-203ENST00000565704 CLTCQ00610 1675 aaKnown RBP19.89■□□□□ 0.77
GDPD3-203ENST00000565704 ADAMTSL3P82987 1691 aa19.87■□□□□ 0.77
GDPD3-203ENST00000565704 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
GDPD3-203ENST00000565704 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
GDPD3-203ENST00000565704 MROH2AA6NES4 1674 aa19.86■□□□□ 0.77
GDPD3-203ENST00000565704 FBXO31Q5XUX0 539 aaPredicted RBP19.85■□□□□ 0.77
GDPD3-203ENST00000565704 ERVK-7P63135 1459 aa19.84■□□□□ 0.77
GDPD3-203ENST00000565704 CCDC144AA2RUR9 1427 aa19.84■□□□□ 0.77
GDPD3-203ENST00000565704 SPATA31D1Q6ZQQ2 1576 aa19.83■□□□□ 0.77
GDPD3-203ENST00000565704 SYNMO15061 1565 aa19.83■□□□□ 0.76
GDPD3-203ENST00000565704 SPATA31E1Q6ZUB1 1445 aa19.82■□□□□ 0.76
GDPD3-203ENST00000565704 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
GDPD3-203ENST00000565704 PREX1Q8TCU6 1659 aa19.81■□□□□ 0.76
GDPD3-203ENST00000565704 PIK3C2BO00750 1634 aa19.8■□□□□ 0.76
GDPD3-203ENST00000565704 CLTCL1P53675 1640 aa19.8■□□□□ 0.76
GDPD3-203ENST00000565704 NEURL4Q96JN8 1562 aa19.8■□□□□ 0.76
GDPD3-203ENST00000565704 SLC52A1Q9NWF4 448 aa19.8■□□□□ 0.76
GDPD3-203ENST00000565704 FER1L4A9Z1Z3 1794 aa19.8■□□□□ 0.76
GDPD3-203ENST00000565704 L3MBTL2Q969R5 705 aa19.79■□□□□ 0.76
GDPD3-203ENST00000565704 MADDQ8WXG6 1647 aa19.79■□□□□ 0.76
GDPD3-203ENST00000565704 CFAP65Q6ZU64 1925 aaKnown RBP19.78■□□□□ 0.76
GDPD3-203ENST00000565704 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
GDPD3-203ENST00000565704 IDI1Q13907 227 aa19.78■□□□□ 0.76
GDPD3-203ENST00000565704 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
GDPD3-203ENST00000565704 C3P01024 1663 aa19.76■□□□□ 0.75
GDPD3-203ENST00000565704 CEBPAP49715 358 aaPredicted RBP19.75■□□□□ 0.75
GDPD3-203ENST00000565704 TONSLQ96HA7 1378 aa19.73■□□□□ 0.75
GDPD3-203ENST00000565704 ADGRB3O60242 1522 aa19.71■□□□□ 0.75
GDPD3-203ENST00000565704 TNRQ92752 1358 aa19.71■□□□□ 0.75
GDPD3-203ENST00000565704 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
GDPD3-203ENST00000565704 KDM4FA0A1W2PPD8 638 aa19.7■□□□□ 0.74
GDPD3-203ENST00000565704 PTPRMP28827 1452 aa19.68■□□□□ 0.74
GDPD3-203ENST00000565704 STAC3Q96MF2 364 aa19.68■□□□□ 0.74
GDPD3-203ENST00000565704 TMEM131LA2VDJ0 1609 aa19.68■□□□□ 0.74
GDPD3-203ENST00000565704 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
GDPD3-203ENST00000565704 RGL3Q3MIN7 710 aa19.67■□□□□ 0.74
GDPD3-203ENST00000565704 KIF1BO60333 1816 aa19.67■□□□□ 0.74
GDPD3-203ENST00000565704 RPGRIP1LQ68CZ1 1315 aa19.66■□□□□ 0.74
GDPD3-203ENST00000565704 NLRP1Q9C000 1473 aa19.66■□□□□ 0.74
GDPD3-203ENST00000565704 NBPF8Q3BBV2 869 aa19.65■□□□□ 0.74
GDPD3-203ENST00000565704 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
GDPD3-203ENST00000565704 A2ML1A8K2U0 1454 aa19.64■□□□□ 0.73
GDPD3-203ENST00000565704 KDM5AP29375 1690 aaKnown RBP19.63■□□□□ 0.73
GDPD3-203ENST00000565704 SETD1BQ9UPS6 1966 aaKnown RBP19.61■□□□□ 0.73
GDPD3-203ENST00000565704 NRXN1Q9ULB1 1477 aa19.6■□□□□ 0.73
GDPD3-203ENST00000565704 ZFYVE9O95405 1425 aa19.6■□□□□ 0.73
GDPD3-203ENST00000565704 IFT172Q9UG01 1749 aa19.59■□□□□ 0.73
GDPD3-203ENST00000565704 MYOM2P54296 1465 aa19.59■□□□□ 0.73
GDPD3-203ENST00000565704 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
GDPD3-203ENST00000565704 NEXMIFQ5QGS0 1516 aa19.58■□□□□ 0.73
GDPD3-203ENST00000565704 CHGAP10645 457 aaKnown RBP19.57■□□□□ 0.72
GDPD3-203ENST00000565704 KDM2AQ9Y2K7 1162 aa19.57■□□□□ 0.72
GDPD3-203ENST00000565704 MYO5BQ9ULV0 1848 aa19.57■□□□□ 0.72
GDPD3-203ENST00000565704 UBR1Q8IWV7 1749 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms