RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DNMT1P26358 1616 aaKnown RBP26.01■■□□□ 1.75
USB1-211ENST00000565662 ZNF142P52746 1687 aaPredicted RBP26.01■■□□□ 1.75
USB1-211ENST00000565662 KIF3BO15066 747 aa25.99■■□□□ 1.75
USB1-211ENST00000565662 HSPA2P54652 639 aa25.98■■□□□ 1.75
USB1-211ENST00000565662 MYO3AQ8NEV4 1616 aa25.96■■□□□ 1.75
USB1-211ENST00000565662 PTPRKQ15262 1439 aa25.96■■□□□ 1.75
USB1-211ENST00000565662 ERBINQ96RT1 1412 aa25.96■■□□□ 1.75
USB1-211ENST00000565662 DAPK1P53355 1430 aa25.95■■□□□ 1.74
USB1-211ENST00000565662 PZPP20742 1482 aa25.94■■□□□ 1.74
USB1-211ENST00000565662 WASHC2CQ9Y4E1 1318 aa25.92■■□□□ 1.74
USB1-211ENST00000565662 ABCC5O15440 1437 aa25.92■■□□□ 1.74
USB1-211ENST00000565662 CEP170BQ9Y4F5 1589 aaPredicted RBP25.91■■□□□ 1.74
USB1-211ENST00000565662 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
USB1-211ENST00000565662 PLA2R1Q13018 1463 aa25.9■■□□□ 1.74
USB1-211ENST00000565662 STRCQ7RTU9 1775 aa25.9■■□□□ 1.74
USB1-211ENST00000565662 PTPRTO14522 1441 aa25.89■■□□□ 1.74
USB1-211ENST00000565662 ANKRD30AQ9BXX3 1397 aa25.89■■□□□ 1.74
USB1-211ENST00000565662 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
USB1-211ENST00000565662 PRDM15P57071 1507 aaPredicted RBP25.87■■□□□ 1.73
USB1-211ENST00000565662 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
USB1-211ENST00000565662 ADGRL2O95490 1459 aa25.85■■□□□ 1.73
USB1-211ENST00000565662 CAMSAP1Q5T5Y3 1602 aa25.85■■□□□ 1.73
USB1-211ENST00000565662 ABCC3O15438 1527 aa25.84■■□□□ 1.73
USB1-211ENST00000565662 NLRP1Q9C000 1473 aa25.84■■□□□ 1.73
USB1-211ENST00000565662 DEPDC5O75140 1603 aa25.83■■□□□ 1.73
USB1-211ENST00000565662 TNRQ92752 1358 aa25.82■■□□□ 1.72
USB1-211ENST00000565662 MROH1Q8NDA8 1641 aa25.81■■□□□ 1.72
USB1-211ENST00000565662 PKD2Q13563 968 aa25.8■■□□□ 1.72
USB1-211ENST00000565662 KANK1Q14678 1352 aa25.8■■□□□ 1.72
USB1-211ENST00000565662 FBXO41Q8TF61 875 aa25.78■■□□□ 1.72
USB1-211ENST00000565662 SPATA31D1Q6ZQQ2 1576 aa25.78■■□□□ 1.72
USB1-211ENST00000565662 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
USB1-211ENST00000565662 ARHGAP31Q2M1Z3 1444 aa25.76■■□□□ 1.71
USB1-211ENST00000565662 CEP152O94986 1710 aa25.76■■□□□ 1.71
USB1-211ENST00000565662 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.75■■□□□ 1.71
USB1-211ENST00000565662 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
USB1-211ENST00000565662 RRP7BPQ9NSQ0 103 aa25.74■■□□□ 1.71
USB1-211ENST00000565662 LMTK2Q8IWU2 1503 aa25.72■■□□□ 1.71
USB1-211ENST00000565662 POLR1AO95602 1720 aaPredicted RBP25.71■■□□□ 1.71
USB1-211ENST00000565662 ERVK-7P63135 1459 aa25.71■■□□□ 1.71
USB1-211ENST00000565662 UGGT1Q9NYU2 1555 aa25.7■■□□□ 1.71
USB1-211ENST00000565662 IQSEC2Q5JU85 1478 aa25.69■■□□□ 1.7
USB1-211ENST00000565662 ROCK1Q13464 1354 aa25.69■■□□□ 1.7
USB1-211ENST00000565662 THEMISQ8N1K5 641 aaPredicted RBP25.68■■□□□ 1.7
USB1-211ENST00000565662 VWDEQ8N2E2 1590 aa25.67■■□□□ 1.7
USB1-211ENST00000565662 CERKQ8TCT0 537 aa25.67■■□□□ 1.7
USB1-211ENST00000565662 ANKRD50Q9ULJ7 1429 aa25.66■■□□□ 1.7
USB1-211ENST00000565662 FBXO31Q5XUX0 539 aaPredicted RBP25.65■■□□□ 1.7
USB1-211ENST00000565662 CHIC2Q9UKJ5 165 aa25.64■■□□□ 1.7
USB1-211ENST00000565662 KDM5AP29375 1690 aaKnown RBP25.61■■□□□ 1.69
USB1-211ENST00000565662 RPRD2Q5VT52 1461 aaKnown RBP25.61■■□□□ 1.69
USB1-211ENST00000565662 EFCAB6Q5THR3 1501 aa25.61■■□□□ 1.69
USB1-211ENST00000565662 ANKLE2Q86XL3 938 aa25.59■■□□□ 1.69
USB1-211ENST00000565662 UNC13BO14795 1591 aa25.57■■□□□ 1.68
USB1-211ENST00000565662 MED14O60244 1454 aa25.57■■□□□ 1.68
USB1-211ENST00000565662 NCKAP5LQ9HCH0 1330 aa25.57■■□□□ 1.68
USB1-211ENST00000565662 LTBP4Q8N2S1 1624 aa25.56■■□□□ 1.68
USB1-211ENST00000565662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.56■■□□□ 1.68
USB1-211ENST00000565662 UBR1Q8IWV7 1749 aa25.56■■□□□ 1.68
USB1-211ENST00000565662 TET3O43151 1660 aa25.55■■□□□ 1.68
USB1-211ENST00000565662 NEURL4Q96JN8 1562 aa25.54■■□□□ 1.68
USB1-211ENST00000565662 GCC2Q8IWJ2 1684 aa25.54■■□□□ 1.68
USB1-211ENST00000565662 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
USB1-211ENST00000565662 CFAP65Q6ZU64 1925 aaKnown RBP25.53■■□□□ 1.68
USB1-211ENST00000565662 SLIT1O75093 1534 aa25.5■■□□□ 1.67
USB1-211ENST00000565662 CPS1P31327 1500 aa25.5■■□□□ 1.67
USB1-211ENST00000565662 IQGAP1P46940 1657 aa25.5■■□□□ 1.67
USB1-211ENST00000565662 NPHP4O75161 1426 aaPredicted RBP25.48■■□□□ 1.67
USB1-211ENST00000565662 IQGAP3Q86VI3 1631 aa25.48■■□□□ 1.67
USB1-211ENST00000565662 NOS1P29475 1434 aa25.47■■□□□ 1.67
USB1-211ENST00000565662 PIK3C2BO00750 1634 aa25.46■■□□□ 1.67
USB1-211ENST00000565662 SLC52A1Q9NWF4 448 aa25.46■■□□□ 1.67
USB1-211ENST00000565662 SCAF11Q99590 1463 aaKnown RBP25.46■■□□□ 1.67
USB1-211ENST00000565662 ARHGAP23Q9P227 1491 aa25.46■■□□□ 1.67
USB1-211ENST00000565662 STAG3Q9UJ98 1225 aa25.43■■□□□ 1.66
USB1-211ENST00000565662 EID1Q9Y6B2 187 aa25.43■■□□□ 1.66
USB1-211ENST00000565662 SYNMO15061 1565 aa25.43■■□□□ 1.66
USB1-211ENST00000565662 ADGRB3O60242 1522 aa25.42■■□□□ 1.66
USB1-211ENST00000565662 ZNF335Q9H4Z2 1342 aaPredicted RBP25.41■■□□□ 1.66
USB1-211ENST00000565662 TMEM2Q9UHN6 1383 aa25.38■■□□□ 1.65
USB1-211ENST00000565662 ITGAEP38570 1179 aa25.35■■□□□ 1.65
USB1-211ENST00000565662 E9PCH4 1651 aa25.34■■□□□ 1.65
USB1-211ENST00000565662 NUP155O75694 1391 aa25.33■■□□□ 1.65
USB1-211ENST00000565662 HDGFP51858 240 aaKnown RBP25.33■■□□□ 1.65
USB1-211ENST00000565662 IDI1Q13907 227 aa25.32■■□□□ 1.64
USB1-211ENST00000565662 TXNDC2Q86VQ3 553 aa25.32■■□□□ 1.64
USB1-211ENST00000565662 PPARGC1BQ86YN6 1023 aaKnown RBP25.32■■□□□ 1.64
USB1-211ENST00000565662 HFM1A2PYH4 1435 aa25.29■■□□□ 1.64
USB1-211ENST00000565662 ACIN1Q9UKV3 1341 aaKnown RBP25.27■■□□□ 1.64
USB1-211ENST00000565662 NAIPQ13075 1403 aa25.26■■□□□ 1.63
USB1-211ENST00000565662 TMEM131LA2VDJ0 1609 aa25.25■■□□□ 1.63
USB1-211ENST00000565662 SPHKAPQ2M3C7 1700 aa25.25■■□□□ 1.63
USB1-211ENST00000565662 LTKP29376 864 aa25.23■■□□□ 1.63
USB1-211ENST00000565662 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
USB1-211ENST00000565662 TOM1O60784 492 aa25.22■■□□□ 1.63
USB1-211ENST00000565662 UBAP1LF5GYI3 381 aa25.21■■□□□ 1.63
USB1-211ENST00000565662 ZFYVE9O95405 1425 aa25.2■■□□□ 1.62
USB1-211ENST00000565662 MYO5BQ9ULV0 1848 aa25.19■■□□□ 1.62
USB1-211ENST00000565662 DIP2AQ14689 1571 aa25.18■■□□□ 1.62
USB1-211ENST00000565662 PLEKHG1Q9ULL1 1385 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms