RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 DUOX2Q9NRD8 1548 aa19.25■□□□□ 0.67
CFDP1-205ENST00000565646 SETD1BQ9UPS6 1966 aaKnown RBP19.25■□□□□ 0.67
CFDP1-205ENST00000565646 PREX1Q8TCU6 1659 aa19.25■□□□□ 0.67
CFDP1-205ENST00000565646 A2MP01023 1474 aa19.25■□□□□ 0.67
CFDP1-205ENST00000565646 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
CFDP1-205ENST00000565646 HFM1A2PYH4 1435 aa19.24■□□□□ 0.67
CFDP1-205ENST00000565646 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
CFDP1-205ENST00000565646 EIF2AK4Q9P2K8 1649 aaKnown RBP19.2■□□□□ 0.66
CFDP1-205ENST00000565646 AGLP35573 1532 aa19.2■□□□□ 0.66
CFDP1-205ENST00000565646 ERBINQ96RT1 1412 aa19.19■□□□□ 0.66
CFDP1-205ENST00000565646 ANKRD50Q9ULJ7 1429 aa19.19■□□□□ 0.66
CFDP1-205ENST00000565646 STRCQ7RTU9 1775 aa19.17■□□□□ 0.66
CFDP1-205ENST00000565646 RNF17Q9BXT8 1623 aaKnown RBP19.15■□□□□ 0.66
CFDP1-205ENST00000565646 PCGF6Q9BYE7 350 aa19.15■□□□□ 0.66
CFDP1-205ENST00000565646 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
CFDP1-205ENST00000565646 SETD5Q9C0A6 1442 aa19.15■□□□□ 0.66
CFDP1-205ENST00000565646 DEPDC5O75140 1603 aa19.14■□□□□ 0.66
CFDP1-205ENST00000565646 MROH1Q8NDA8 1641 aa19.14■□□□□ 0.65
CFDP1-205ENST00000565646 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
CFDP1-205ENST00000565646 KIF3BO15066 747 aa19.12■□□□□ 0.65
CFDP1-205ENST00000565646 C3P01024 1663 aa19.11■□□□□ 0.65
CFDP1-205ENST00000565646 UNC13BO14795 1591 aa19.11■□□□□ 0.65
CFDP1-205ENST00000565646 RAB3GAP2Q9H2M9 1393 aa19.11■□□□□ 0.65
CFDP1-205ENST00000565646 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
CFDP1-205ENST00000565646 PRDM15P57071 1507 aaPredicted RBP19.09■□□□□ 0.65
CFDP1-205ENST00000565646 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
CFDP1-205ENST00000565646 GGT6Q6P531 493 aa19.05■□□□□ 0.64
CFDP1-205ENST00000565646 CEP152O94986 1710 aa19.04■□□□□ 0.64
CFDP1-205ENST00000565646 HRCP23327 699 aa19.04■□□□□ 0.64
CFDP1-205ENST00000565646 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
CFDP1-205ENST00000565646 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
CFDP1-205ENST00000565646 PTPRTO14522 1441 aa19.01■□□□□ 0.63
CFDP1-205ENST00000565646 ABCC3O15438 1527 aa19.01■□□□□ 0.63
CFDP1-205ENST00000565646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.632e-6■■■□□ 18
CFDP1-205ENST00000565646 DISP3Q9P2K9 1392 aa19.01■□□□□ 0.63
CFDP1-205ENST00000565646 CLTCQ00610 1675 aaKnown RBP19■□□□□ 0.63
CFDP1-205ENST00000565646 ZC3H13Q5T200 1668 aaKnown RBP19■□□□□ 0.63
CFDP1-205ENST00000565646 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
CFDP1-205ENST00000565646 PZPP20742 1482 aa18.99■□□□□ 0.63
CFDP1-205ENST00000565646 NUP155O75694 1391 aa18.99■□□□□ 0.63
CFDP1-205ENST00000565646 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
CFDP1-205ENST00000565646 LMTK2Q8IWU2 1503 aa18.98■□□□□ 0.63
CFDP1-205ENST00000565646 TET3O43151 1660 aa18.97■□□□□ 0.63
CFDP1-205ENST00000565646 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
CFDP1-205ENST00000565646 CAMSAP1Q5T5Y3 1602 aa18.96■□□□□ 0.63
CFDP1-205ENST00000565646 KANK1Q14678 1352 aa18.96■□□□□ 0.63
CFDP1-205ENST00000565646 MROH2AA6NES4 1674 aa18.96■□□□□ 0.63
CFDP1-205ENST00000565646 ILDR2Q71H61 639 aa18.96■□□□□ 0.63
CFDP1-205ENST00000565646 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
CFDP1-205ENST00000565646 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
CFDP1-205ENST00000565646 WASHC2CQ9Y4E1 1318 aa18.95■□□□□ 0.62
CFDP1-205ENST00000565646 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
CFDP1-205ENST00000565646 E9PCH4 1651 aa18.93■□□□□ 0.62
CFDP1-205ENST00000565646 EFCAB6Q5THR3 1501 aa18.93■□□□□ 0.62
CFDP1-205ENST00000565646 LTBP4Q8N2S1 1624 aa18.92■□□□□ 0.62
CFDP1-205ENST00000565646 ZMYM3Q14202 1370 aa18.91■□□□□ 0.62
CFDP1-205ENST00000565646 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
CFDP1-205ENST00000565646 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
CFDP1-205ENST00000565646 NPATQ14207 1427 aa18.89■□□□□ 0.61
CFDP1-205ENST00000565646 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
CFDP1-205ENST00000565646 SOCS7O14512 581 aa18.88■□□□□ 0.61
CFDP1-205ENST00000565646 IQSEC2Q5JU85 1478 aa18.87■□□□□ 0.61
CFDP1-205ENST00000565646 NCKAP5LQ9HCH0 1330 aa18.87■□□□□ 0.61
CFDP1-205ENST00000565646 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
CFDP1-205ENST00000565646 PKD2Q13563 968 aa18.86■□□□□ 0.61
CFDP1-205ENST00000565646 RPRD2Q5VT52 1461 aaKnown RBP18.85■□□□□ 0.61
CFDP1-205ENST00000565646 DHX57Q6P158 1386 aaKnown RBP18.85■□□□□ 0.61
CFDP1-205ENST00000565646 SPHKAPQ2M3C7 1700 aa18.83■□□□□ 0.6
CFDP1-205ENST00000565646 FOXD1Q16676 465 aa18.82■□□□□ 0.6
CFDP1-205ENST00000565646 FBXO31Q5XUX0 539 aaPredicted RBP18.82■□□□□ 0.6
CFDP1-205ENST00000565646 ERVK-7P63135 1459 aa18.82■□□□□ 0.6
CFDP1-205ENST00000565646 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
CFDP1-205ENST00000565646 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
CFDP1-205ENST00000565646 ZNF142P52746 1687 aaPredicted RBP18.81■□□□□ 0.6
CFDP1-205ENST00000565646 NOS1P29475 1434 aa18.81■□□□□ 0.6
CFDP1-205ENST00000565646 PLA2R1Q13018 1463 aa18.8■□□□□ 0.6
CFDP1-205ENST00000565646 SYNMO15061 1565 aa18.8■□□□□ 0.6
CFDP1-205ENST00000565646 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
CFDP1-205ENST00000565646 CEP170BQ9Y4F5 1589 aaPredicted RBP18.78■□□□□ 0.6
CFDP1-205ENST00000565646 TRPM2O94759 1503 aa18.76■□□□□ 0.59
CFDP1-205ENST00000565646 ANKRD30BQ9BXX2 1392 aa18.76■□□□□ 0.59
CFDP1-205ENST00000565646 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
CFDP1-205ENST00000565646 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
CFDP1-205ENST00000565646 CLTCL1P53675 1640 aa18.74■□□□□ 0.59
CFDP1-205ENST00000565646 TNRQ92752 1358 aa18.73■□□□□ 0.59
CFDP1-205ENST00000565646 A2ML1A8K2U0 1454 aa18.69■□□□□ 0.58
CFDP1-205ENST00000565646 POLR1AO95602 1720 aaPredicted RBP18.69■□□□□ 0.58
CFDP1-205ENST00000565646 MYO5BQ9ULV0 1848 aa18.68■□□□□ 0.58
CFDP1-205ENST00000565646 NLRP1Q9C000 1473 aa18.67■□□□□ 0.58
CFDP1-205ENST00000565646 IDI1Q13907 227 aa18.67■□□□□ 0.58
CFDP1-205ENST00000565646 KIF1BO60333 1816 aa18.67■□□□□ 0.58
CFDP1-205ENST00000565646 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
CFDP1-205ENST00000565646 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
CFDP1-205ENST00000565646 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
CFDP1-205ENST00000565646 TMEM131LA2VDJ0 1609 aa18.64■□□□□ 0.57
CFDP1-205ENST00000565646 KDM5AP29375 1690 aaKnown RBP18.64■□□□□ 0.57
CFDP1-205ENST00000565646 UBR1Q8IWV7 1749 aa18.64■□□□□ 0.57
CFDP1-205ENST00000565646 CCER1Q8TC90 406 aaPredicted RBP18.64■□□□□ 0.57
CFDP1-205ENST00000565646 SIN3AQ96ST3 1273 aa18.63■□□□□ 0.57
CFDP1-205ENST00000565646 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms