RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 RICTORQ6R327 1708 aa27.89■■■□□ 2.06
PKD1-230ENST00000565639 TSPOAP1O95153 1857 aa27.87■■■□□ 2.05
PKD1-230ENST00000565639 DEPDC5O75140 1603 aa27.86■■■□□ 2.05
PKD1-230ENST00000565639 RPRD2Q5VT52 1461 aaKnown RBP27.86■■■□□ 2.05
PKD1-230ENST00000565639 RAPGEF3O95398 923 aa27.85■■■□□ 2.05
PKD1-230ENST00000565639 A2MP01023 1474 aa27.83■■■□□ 2.05
PKD1-230ENST00000565639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.83■■■□□ 2.05
PKD1-230ENST00000565639 PPP1R15AO75807 674 aaPredicted RBP27.82■■■□□ 2.04
PKD1-230ENST00000565639 FRMPD1Q5SYB0 1578 aa27.81■■■□□ 2.04
PKD1-230ENST00000565639 ABCA6Q8N139 1617 aa27.8■■■□□ 2.04
PKD1-230ENST00000565639 ZMYM4Q5VZL5 1548 aa27.79■■■□□ 2.04
PKD1-230ENST00000565639 KIF3BO15066 747 aa27.77■■■□□ 2.04
PKD1-230ENST00000565639 PRDM15P57071 1507 aaPredicted RBP27.76■■■□□ 2.04
PKD1-230ENST00000565639 VWDEQ8N2E2 1590 aa27.76■■■□□ 2.03
PKD1-230ENST00000565639 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
PKD1-230ENST00000565639 DIP2CQ9Y2E4 1556 aa27.76■■■□□ 2.03
PKD1-230ENST00000565639 KANK1Q14678 1352 aa27.75■■■□□ 2.03
PKD1-230ENST00000565639 BCORL1Q5H9F3 1711 aa27.75■■■□□ 2.03
PKD1-230ENST00000565639 MROH1Q8NDA8 1641 aa27.73■■■□□ 2.03
PKD1-230ENST00000565639 RNF17Q9BXT8 1623 aaKnown RBP27.73■■■□□ 2.03
PKD1-230ENST00000565639 DNAJC5Q9H3Z4 198 aa27.71■■■□□ 2.03
PKD1-230ENST00000565639 ATP10AO60312 1499 aa27.7■■■□□ 2.02
PKD1-230ENST00000565639 TET3O43151 1660 aa27.69■■■□□ 2.02
PKD1-230ENST00000565639 L3MBTL2Q969R5 705 aa27.68■■■□□ 2.02
PKD1-230ENST00000565639 YEATS2Q9ULM3 1422 aa27.67■■■□□ 2.02
PKD1-230ENST00000565639 PLA2R1Q13018 1463 aa27.65■■■□□ 2.02
PKD1-230ENST00000565639 LMTK2Q8IWU2 1503 aa27.64■■■□□ 2.02
PKD1-230ENST00000565639 E9PCH4 1651 aa27.64■■■□□ 2.01
PKD1-230ENST00000565639 CCDC144AA2RUR9 1427 aa27.62■■■□□ 2.01
PKD1-230ENST00000565639 COL17A1Q9UMD9 1497 aaPredicted RBP27.61■■■□□ 2.01
PKD1-230ENST00000565639 REREQ9P2R6 1566 aa27.59■■■□□ 2.01
PKD1-230ENST00000565639 PTPRTO14522 1441 aa27.57■■■□□ 2
PKD1-230ENST00000565639 EFCAB6Q5THR3 1501 aa27.56■■■□□ 2
PKD1-230ENST00000565639 TRPM2O94759 1503 aa27.54■■■□□ 2
PKD1-230ENST00000565639 SPHKAPQ2M3C7 1700 aa27.54■■■□□ 2
PKD1-230ENST00000565639 GGT6Q6P531 493 aa27.53■■■□□ 2
PKD1-230ENST00000565639 CEP152O94986 1710 aa27.53■■■□□ 2
PKD1-230ENST00000565639 AGLP35573 1532 aa27.51■■□□□ 1.99
PKD1-230ENST00000565639 ABCC3O15438 1527 aa27.51■■□□□ 1.99
PKD1-230ENST00000565639 ARHGEF40Q8TER5 1519 aa27.51■■□□□ 1.99
PKD1-230ENST00000565639 ZC3H13Q5T200 1668 aaKnown RBP27.47■■□□□ 1.99
PKD1-230ENST00000565639 WASHC2CQ9Y4E1 1318 aa27.47■■□□□ 1.99
PKD1-230ENST00000565639 UHRF1BP1Q6BDS2 1440 aa27.46■■□□□ 1.99
PKD1-230ENST00000565639 TRHP20396 242 aaPredicted RBP27.45■■□□□ 1.98
PKD1-230ENST00000565639 NBPF8Q3BBV2 869 aa27.45■■□□□ 1.98
PKD1-230ENST00000565639 DIEXFQ68CQ4 756 aaKnown RBP27.43■■□□□ 1.98
PKD1-230ENST00000565639 CAMSAP1Q5T5Y3 1602 aa27.42■■□□□ 1.98
PKD1-230ENST00000565639 NPATQ14207 1427 aa27.42■■□□□ 1.98
PKD1-230ENST00000565639 PPP6R1Q9UPN7 881 aa27.41■■□□□ 1.98
PKD1-230ENST00000565639 CLTCL1P53675 1640 aa27.41■■□□□ 1.98
PKD1-230ENST00000565639 ARHGAP31Q2M1Z3 1444 aa27.4■■□□□ 1.98
PKD1-230ENST00000565639 SPATA31E1Q6ZUB1 1445 aa27.4■■□□□ 1.98
PKD1-230ENST00000565639 NEURL4Q96JN8 1562 aa27.39■■□□□ 1.98
PKD1-230ENST00000565639 DCAF11Q8TEB1 546 aa27.38■■□□□ 1.97
PKD1-230ENST00000565639 CNTLNQ9NXG0 1405 aa27.36■■□□□ 1.97
PKD1-230ENST00000565639 SIGLEC1Q9BZZ2 1709 aa27.34■■□□□ 1.97
PKD1-230ENST00000565639 RGL3Q3MIN7 710 aa27.34■■□□□ 1.97
PKD1-230ENST00000565639 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
PKD1-230ENST00000565639 NOS1P29475 1434 aa27.32■■□□□ 1.96
PKD1-230ENST00000565639 KDM2AQ9Y2K7 1162 aa27.31■■□□□ 1.96
PKD1-230ENST00000565639 EIF4G2P78344 907 aaKnown RBP eCLIP27.31■■□□□ 1.96
PKD1-230ENST00000565639 STAC3Q96MF2 364 aa27.31■■□□□ 1.96
PKD1-230ENST00000565639 PRAG1Q86YV5 1406 aa27.3■■□□□ 1.96
PKD1-230ENST00000565639 ZNF326Q5BKZ1 582 aaKnown RBP27.29■■□□□ 1.96
PKD1-230ENST00000565639 UGGT1Q9NYU2 1555 aa27.29■■□□□ 1.96
PKD1-230ENST00000565639 KIF1BO60333 1816 aa27.28■■□□□ 1.96
PKD1-230ENST00000565639 HSPA5P11021 654 aaKnown RBP27.26■■□□□ 1.95
PKD1-230ENST00000565639 CFAP65Q6ZU64 1925 aaKnown RBP27.25■■□□□ 1.95
PKD1-230ENST00000565639 HIRIP3Q9BW71 556 aaPredicted RBP27.23■■□□□ 1.95
PKD1-230ENST00000565639 PIK3C2BO00750 1634 aa27.22■■□□□ 1.95
PKD1-230ENST00000565639 TRPM1Q7Z4N2 1603 aa27.22■■□□□ 1.95
PKD1-230ENST00000565639 SYNMO15061 1565 aa27.22■■□□□ 1.95
PKD1-230ENST00000565639 ADGRB3O60242 1522 aa27.21■■□□□ 1.95
PKD1-230ENST00000565639 PREX1Q8TCU6 1659 aa27.2■■□□□ 1.95
PKD1-230ENST00000565639 CLTCQ00610 1675 aaKnown RBP27.2■■□□□ 1.94
PKD1-230ENST00000565639 SLC52A1Q9NWF4 448 aa27.17■■□□□ 1.94
PKD1-230ENST00000565639 MROH2AA6NES4 1674 aa27.17■■□□□ 1.94
PKD1-230ENST00000565639 MLECQ14165 292 aa27.17■■□□□ 1.94
PKD1-230ENST00000565639 MADDQ8WXG6 1647 aa27.16■■□□□ 1.94
PKD1-230ENST00000565639 GPRASP1Q5JY77 1395 aa27.16■■□□□ 1.94
PKD1-230ENST00000565639 ROCK2O75116 1388 aaKnown RBP27.15■■□□□ 1.94
PKD1-230ENST00000565639 USP47Q96K76 1375 aa27.15■■□□□ 1.94
PKD1-230ENST00000565639 CARD11Q9BXL7 1154 aa27.15■■□□□ 1.94
PKD1-230ENST00000565639 MYOM2P54296 1465 aa27.15■■□□□ 1.94
PKD1-230ENST00000565639 ERVK-7P63135 1459 aa27.15■■□□□ 1.94
PKD1-230ENST00000565639 IFT172Q9UG01 1749 aa27.14■■□□□ 1.94
PKD1-230ENST00000565639 ARID4BQ4LE39 1312 aaPredicted RBP27.14■■□□□ 1.94
PKD1-230ENST00000565639 LAMC1P11047 1609 aa27.13■■□□□ 1.93
PKD1-230ENST00000565639 ESF1Q9H501 851 aaKnown RBP27.11■■□□□ 1.93
PKD1-230ENST00000565639 RPGRIP1LQ68CZ1 1315 aa27.11■■□□□ 1.93
PKD1-230ENST00000565639 SPATA31D1Q6ZQQ2 1576 aa27.1■■□□□ 1.93
PKD1-230ENST00000565639 CHGAP10645 457 aaKnown RBP27.08■■□□□ 1.93
PKD1-230ENST00000565639 IDI1Q13907 227 aa27.08■■□□□ 1.93
PKD1-230ENST00000565639 FBXO31Q5XUX0 539 aaPredicted RBP27.08■■□□□ 1.92
PKD1-230ENST00000565639 NRXN1Q9ULB1 1477 aa27.06■■□□□ 1.92
PKD1-230ENST00000565639 KIAA1210Q9ULL0 1709 aa27.06■■□□□ 1.92
PKD1-230ENST00000565639 ZMYM3Q14202 1370 aa27.06■■□□□ 1.92
PKD1-230ENST00000565639 NBPF1Q3BBV0 1214 aa27.06■■□□□ 1.92
PKD1-230ENST00000565639 PPLO60437 1756 aa27.05■■□□□ 1.92
PKD1-230ENST00000565639 DDX10Q13206 875 aaKnown RBP27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms