RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
NSMCE1-210ENST00000565626 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
NSMCE1-210ENST00000565626 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
NSMCE1-210ENST00000565626 RRP7BPQ9NSQ0 103 aa17.05■□□□□ 0.32
NSMCE1-210ENST00000565626 CAMSAP1Q5T5Y3 1602 aa17.05■□□□□ 0.32
NSMCE1-210ENST00000565626 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
NSMCE1-210ENST00000565626 DAPK1P53355 1430 aa17.04■□□□□ 0.32
NSMCE1-210ENST00000565626 NCKAP5LQ9HCH0 1330 aa17.04■□□□□ 0.32
NSMCE1-210ENST00000565626 TCOF1Q13428 1488 aaKnown RBP17.04■□□□□ 0.32
NSMCE1-210ENST00000565626 KIF15Q9NS87 1388 aa17.03■□□□□ 0.32
NSMCE1-210ENST00000565626 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
NSMCE1-210ENST00000565626 PZPP20742 1482 aa17.03■□□□□ 0.32
NSMCE1-210ENST00000565626 TNRQ92752 1358 aa17.02■□□□□ 0.32
NSMCE1-210ENST00000565626 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.32
NSMCE1-210ENST00000565626 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.32
NSMCE1-210ENST00000565626 PTPRTO14522 1441 aa17.02■□□□□ 0.31
NSMCE1-210ENST00000565626 RNF17Q9BXT8 1623 aaKnown RBP17.01■□□□□ 0.31
NSMCE1-210ENST00000565626 ABCC3O15438 1527 aa17.01■□□□□ 0.31
NSMCE1-210ENST00000565626 DUOX2Q9NRD8 1548 aa17.01■□□□□ 0.31
NSMCE1-210ENST00000565626 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
NSMCE1-210ENST00000565626 ZNF142P52746 1687 aaPredicted RBP17■□□□□ 0.31
NSMCE1-210ENST00000565626 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
NSMCE1-210ENST00000565626 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
NSMCE1-210ENST00000565626 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
NSMCE1-210ENST00000565626 PPARGC1BQ86YN6 1023 aaKnown RBP16.99■□□□□ 0.31
NSMCE1-210ENST00000565626 CROCC2H7BZ55 1655 aa16.99■□□□□ 0.31
NSMCE1-210ENST00000565626 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
NSMCE1-210ENST00000565626 EIF2AK4Q9P2K8 1649 aaKnown RBP16.98■□□□□ 0.31
NSMCE1-210ENST00000565626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
NSMCE1-210ENST00000565626 PLA2R1Q13018 1463 aa16.96■□□□□ 0.31
NSMCE1-210ENST00000565626 ERBINQ96RT1 1412 aa16.96■□□□□ 0.3
NSMCE1-210ENST00000565626 ANKRD30AQ9BXX3 1397 aa16.95■□□□□ 0.3
NSMCE1-210ENST00000565626 PKD2Q13563 968 aa16.95■□□□□ 0.3
NSMCE1-210ENST00000565626 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
NSMCE1-210ENST00000565626 LTBP4Q8N2S1 1624 aa16.92■□□□□ 0.3
NSMCE1-210ENST00000565626 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.92■□□□□ 0.3
NSMCE1-210ENST00000565626 CEP152O94986 1710 aa16.92■□□□□ 0.3
NSMCE1-210ENST00000565626 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
NSMCE1-210ENST00000565626 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
NSMCE1-210ENST00000565626 NLRP1Q9C000 1473 aa16.91■□□□□ 0.3
NSMCE1-210ENST00000565626 PRDM15P57071 1507 aaPredicted RBP16.91■□□□□ 0.3
NSMCE1-210ENST00000565626 SPATA31D1Q6ZQQ2 1576 aa16.9■□□□□ 0.3
NSMCE1-210ENST00000565626 ADGRL2O95490 1459 aa16.89■□□□□ 0.29
NSMCE1-210ENST00000565626 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
NSMCE1-210ENST00000565626 UGGT1Q9NYU2 1555 aa16.88■□□□□ 0.29
NSMCE1-210ENST00000565626 CFAP65Q6ZU64 1925 aaKnown RBP16.87■□□□□ 0.29
NSMCE1-210ENST00000565626 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
NSMCE1-210ENST00000565626 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
NSMCE1-210ENST00000565626 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
NSMCE1-210ENST00000565626 KANK1Q14678 1352 aa16.86■□□□□ 0.29
NSMCE1-210ENST00000565626 ARHGAP31Q2M1Z3 1444 aa16.86■□□□□ 0.29
NSMCE1-210ENST00000565626 ITGAEP38570 1179 aa16.84■□□□□ 0.29
NSMCE1-210ENST00000565626 ANKRD50Q9ULJ7 1429 aa16.84■□□□□ 0.29
NSMCE1-210ENST00000565626 VWDEQ8N2E2 1590 aa16.83■□□□□ 0.28
NSMCE1-210ENST00000565626 POLR1AO95602 1720 aaPredicted RBP16.81■□□□□ 0.28
NSMCE1-210ENST00000565626 LMTK2Q8IWU2 1503 aa16.8■□□□□ 0.28
NSMCE1-210ENST00000565626 NPHP4O75161 1426 aaPredicted RBP16.8■□□□□ 0.28
NSMCE1-210ENST00000565626 LTKP29376 864 aa16.78■□□□□ 0.28
NSMCE1-210ENST00000565626 IDI1Q13907 227 aa16.78■□□□□ 0.28
NSMCE1-210ENST00000565626 UBR1Q8IWV7 1749 aa16.78■□□□□ 0.28
NSMCE1-210ENST00000565626 MED14O60244 1454 aa16.78■□□□□ 0.28
NSMCE1-210ENST00000565626 IQSEC2Q5JU85 1478 aa16.77■□□□□ 0.28
NSMCE1-210ENST00000565626 ROCK1Q13464 1354 aa16.77■□□□□ 0.27
NSMCE1-210ENST00000565626 EFCAB6Q5THR3 1501 aa16.76■□□□□ 0.27
NSMCE1-210ENST00000565626 TXNDC2Q86VQ3 553 aa16.75■□□□□ 0.27
NSMCE1-210ENST00000565626 NOS1P29475 1434 aa16.75■□□□□ 0.27
NSMCE1-210ENST00000565626 SYNMO15061 1565 aa16.75■□□□□ 0.27
NSMCE1-210ENST00000565626 PIK3C2BO00750 1634 aa16.74■□□□□ 0.27
NSMCE1-210ENST00000565626 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
NSMCE1-210ENST00000565626 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
NSMCE1-210ENST00000565626 STAG3Q9UJ98 1225 aa16.74■□□□□ 0.27
NSMCE1-210ENST00000565626 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
NSMCE1-210ENST00000565626 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
NSMCE1-210ENST00000565626 SLIT1O75093 1534 aa16.72■□□□□ 0.27
NSMCE1-210ENST00000565626 TMEM2Q9UHN6 1383 aa16.72■□□□□ 0.27
NSMCE1-210ENST00000565626 UNC13BO14795 1591 aa16.7■□□□□ 0.26
NSMCE1-210ENST00000565626 EID1Q9Y6B2 187 aa16.7■□□□□ 0.26
NSMCE1-210ENST00000565626 CPS1P31327 1500 aa16.7■□□□□ 0.26
NSMCE1-210ENST00000565626 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
NSMCE1-210ENST00000565626 NUP155O75694 1391 aa16.69■□□□□ 0.26
NSMCE1-210ENST00000565626 RPRD2Q5VT52 1461 aaKnown RBP16.68■□□□□ 0.26
NSMCE1-210ENST00000565626 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
NSMCE1-210ENST00000565626 SLC52A1Q9NWF4 448 aa16.68■□□□□ 0.26
NSMCE1-210ENST00000565626 TET3O43151 1660 aa16.68■□□□□ 0.26
NSMCE1-210ENST00000565626 ADGRB3O60242 1522 aa16.66■□□□□ 0.26
NSMCE1-210ENST00000565626 STRCP1A6NGW2 1772 aa16.66■□□□□ 0.26
NSMCE1-210ENST00000565626 PIP4K2BP78356 416 aa16.65■□□□□ 0.26
NSMCE1-210ENST00000565626 SLC26A8Q96RN1 970 aa16.64■□□□□ 0.25
NSMCE1-210ENST00000565626 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
NSMCE1-210ENST00000565626 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
NSMCE1-210ENST00000565626 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
NSMCE1-210ENST00000565626 E9PCH4 1651 aa16.63■□□□□ 0.25
NSMCE1-210ENST00000565626 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
NSMCE1-210ENST00000565626 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
NSMCE1-210ENST00000565626 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
NSMCE1-210ENST00000565626 TOM1O60784 492 aa16.61■□□□□ 0.25
NSMCE1-210ENST00000565626 NAIPQ13075 1403 aa16.61■□□□□ 0.25
NSMCE1-210ENST00000565626 ZFYVE9O95405 1425 aa16.6■□□□□ 0.25
NSMCE1-210ENST00000565626 ALKQ9UM73 1620 aa16.59■□□□□ 0.25
NSMCE1-210ENST00000565626 NUTM2DQ5VT03 806 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms