RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 EIF2AK4Q9P2K8 1649 aaKnown RBP13.65□□□□□ -0.22
CNEP1R1-206ENST00000565556 FRMPD1Q5SYB0 1578 aa13.64□□□□□ -0.23
CNEP1R1-206ENST00000565556 NUP155O75694 1391 aa13.64□□□□□ -0.23
CNEP1R1-206ENST00000565556 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
CNEP1R1-206ENST00000565556 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
CNEP1R1-206ENST00000565556 MAGI2Q86UL8 1455 aa13.63□□□□□ -0.23
CNEP1R1-206ENST00000565556 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
CNEP1R1-206ENST00000565556 A2MP01023 1474 aa13.63□□□□□ -0.23
CNEP1R1-206ENST00000565556 PZPP20742 1482 aa13.63□□□□□ -0.23
CNEP1R1-206ENST00000565556 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
CNEP1R1-206ENST00000565556 ABCA6Q8N139 1617 aa13.62□□□□□ -0.23
CNEP1R1-206ENST00000565556 DIP2CQ9Y2E4 1556 aa13.6□□□□□ -0.23
CNEP1R1-206ENST00000565556 DEPDC5O75140 1603 aa13.6□□□□□ -0.23
CNEP1R1-206ENST00000565556 IQGAP3Q86VI3 1631 aa13.6□□□□□ -0.23
CNEP1R1-206ENST00000565556 FAM135AQ9P2D6 1515 aa13.59□□□□□ -0.23
CNEP1R1-206ENST00000565556 BCORL1Q5H9F3 1711 aa13.59□□□□□ -0.23
CNEP1R1-206ENST00000565556 KIF3BO15066 747 aa13.58□□□□□ -0.24
CNEP1R1-206ENST00000565556 KANK1Q14678 1352 aa13.58□□□□□ -0.24
CNEP1R1-206ENST00000565556 PKD2Q13563 968 aa13.57□□□□□ -0.24
CNEP1R1-206ENST00000565556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.24
CNEP1R1-206ENST00000565556 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
CNEP1R1-206ENST00000565556 RNF17Q9BXT8 1623 aaKnown RBP13.56□□□□□ -0.24
CNEP1R1-206ENST00000565556 ATP10AO60312 1499 aa13.56□□□□□ -0.24
CNEP1R1-206ENST00000565556 COL17A1Q9UMD9 1497 aaPredicted RBP13.56□□□□□ -0.24
CNEP1R1-206ENST00000565556 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
CNEP1R1-206ENST00000565556 PRDM15P57071 1507 aaPredicted RBP13.55□□□□□ -0.24
CNEP1R1-206ENST00000565556 ANKRD30BQ9BXX2 1392 aa13.55□□□□□ -0.24
CNEP1R1-206ENST00000565556 REREQ9P2R6 1566 aa13.55□□□□□ -0.24
CNEP1R1-206ENST00000565556 SIN3AQ96ST3 1273 aa13.54□□□□□ -0.24
CNEP1R1-206ENST00000565556 VWDEQ8N2E2 1590 aa13.54□□□□□ -0.24
CNEP1R1-206ENST00000565556 MYT1Q01538 1121 aa13.53□□□□□ -0.24
CNEP1R1-206ENST00000565556 FOXD1Q16676 465 aa13.53□□□□□ -0.24
CNEP1R1-206ENST00000565556 MROH1Q8NDA8 1641 aa13.52□□□□□ -0.24
CNEP1R1-206ENST00000565556 ARHGEF40Q8TER5 1519 aa13.52□□□□□ -0.24
CNEP1R1-206ENST00000565556 TET3O43151 1660 aa13.51□□□□□ -0.25
CNEP1R1-206ENST00000565556 AGLP35573 1532 aa13.51□□□□□ -0.25
CNEP1R1-206ENST00000565556 LMTK2Q8IWU2 1503 aa13.5□□□□□ -0.25
CNEP1R1-206ENST00000565556 TONSLQ96HA7 1378 aa13.5□□□□□ -0.25
CNEP1R1-206ENST00000565556 RPRD2Q5VT52 1461 aaKnown RBP13.49□□□□□ -0.25
CNEP1R1-206ENST00000565556 GGT6Q6P531 493 aa13.48□□□□□ -0.25
CNEP1R1-206ENST00000565556 E9PCH4 1651 aa13.47□□□□□ -0.25
CNEP1R1-206ENST00000565556 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
CNEP1R1-206ENST00000565556 ZC3H13Q5T200 1668 aaKnown RBP13.46□□□□□ -0.25
CNEP1R1-206ENST00000565556 CEP152O94986 1710 aa13.46□□□□□ -0.25
CNEP1R1-206ENST00000565556 EFCAB6Q5THR3 1501 aa13.45□□□□□ -0.26
CNEP1R1-206ENST00000565556 WASHC2CQ9Y4E1 1318 aa13.45□□□□□ -0.26
CNEP1R1-206ENST00000565556 ABCC3O15438 1527 aa13.44□□□□□ -0.26
CNEP1R1-206ENST00000565556 SPHKAPQ2M3C7 1700 aa13.43□□□□□ -0.26
CNEP1R1-206ENST00000565556 CCDC144AA2RUR9 1427 aa13.43□□□□□ -0.26
CNEP1R1-206ENST00000565556 PTPRTO14522 1441 aa13.42□□□□□ -0.26
CNEP1R1-206ENST00000565556 PLA2R1Q13018 1463 aa13.42□□□□□ -0.26
CNEP1R1-206ENST00000565556 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
CNEP1R1-206ENST00000565556 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
CNEP1R1-206ENST00000565556 TRPM2O94759 1503 aa13.41□□□□□ -0.26
CNEP1R1-206ENST00000565556 MIER1Q8N108 512 aa13.41□□□□□ -0.26
CNEP1R1-206ENST00000565556 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
CNEP1R1-206ENST00000565556 SIGLEC1Q9BZZ2 1709 aa13.4□□□□□ -0.26
CNEP1R1-206ENST00000565556 YTHDC1Q96MU7 727 aaKnown RBP13.4□□□□□ -0.26
CNEP1R1-206ENST00000565556 L3MBTL2Q969R5 705 aa13.39□□□□□ -0.27
CNEP1R1-206ENST00000565556 NPATQ14207 1427 aa13.39□□□□□ -0.27
CNEP1R1-206ENST00000565556 ARID4BQ4LE39 1312 aaPredicted RBP13.37□□□□□ -0.27
CNEP1R1-206ENST00000565556 CNTLNQ9NXG0 1405 aa13.37□□□□□ -0.27
CNEP1R1-206ENST00000565556 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
CNEP1R1-206ENST00000565556 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
CNEP1R1-206ENST00000565556 CFAP65Q6ZU64 1925 aaKnown RBP13.35□□□□□ -0.27
CNEP1R1-206ENST00000565556 CLTCL1P53675 1640 aa13.34□□□□□ -0.27
CNEP1R1-206ENST00000565556 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
CNEP1R1-206ENST00000565556 MLECQ14165 292 aa13.34□□□□□ -0.27
CNEP1R1-206ENST00000565556 KIF1BO60333 1816 aa13.33□□□□□ -0.28
CNEP1R1-206ENST00000565556 NOS1P29475 1434 aa13.33□□□□□ -0.28
CNEP1R1-206ENST00000565556 PREX1Q8TCU6 1659 aa13.32□□□□□ -0.28
CNEP1R1-206ENST00000565556 SPATA31E1Q6ZUB1 1445 aa13.31□□□□□ -0.28
CNEP1R1-206ENST00000565556 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
CNEP1R1-206ENST00000565556 MROH2AA6NES4 1674 aa13.31□□□□□ -0.28
CNEP1R1-206ENST00000565556 UHRF1BP1Q6BDS2 1440 aa13.3□□□□□ -0.28
CNEP1R1-206ENST00000565556 DCAF11Q8TEB1 546 aa13.3□□□□□ -0.28
CNEP1R1-206ENST00000565556 SLC52A1Q9NWF4 448 aa13.3□□□□□ -0.28
CNEP1R1-206ENST00000565556 PIK3C2BO00750 1634 aa13.29□□□□□ -0.28
CNEP1R1-206ENST00000565556 RGL3Q3MIN7 710 aa13.29□□□□□ -0.28
CNEP1R1-206ENST00000565556 SYNMO15061 1565 aa13.29□□□□□ -0.28
CNEP1R1-206ENST00000565556 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
CNEP1R1-206ENST00000565556 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
CNEP1R1-206ENST00000565556 ZMYM3Q14202 1370 aa13.28□□□□□ -0.28
CNEP1R1-206ENST00000565556 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
CNEP1R1-206ENST00000565556 SPATA31D1Q6ZQQ2 1576 aa13.27□□□□□ -0.29
CNEP1R1-206ENST00000565556 FER1L4A9Z1Z3 1794 aa13.26□□□□□ -0.29
CNEP1R1-206ENST00000565556 ADGRB3O60242 1522 aa13.26□□□□□ -0.29
CNEP1R1-206ENST00000565556 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
CNEP1R1-206ENST00000565556 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
CNEP1R1-206ENST00000565556 RPGRIP1LQ68CZ1 1315 aa13.24□□□□□ -0.29
CNEP1R1-206ENST00000565556 IDI1Q13907 227 aa13.24□□□□□ -0.29
CNEP1R1-206ENST00000565556 ZNF326Q5BKZ1 582 aaKnown RBP13.24□□□□□ -0.29
CNEP1R1-206ENST00000565556 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
CNEP1R1-206ENST00000565556 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
CNEP1R1-206ENST00000565556 RALGAPBQ86X10 1494 aa13.23□□□□□ -0.29
CNEP1R1-206ENST00000565556 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
CNEP1R1-206ENST00000565556 MYOM2P54296 1465 aa13.21□□□□□ -0.29
CNEP1R1-206ENST00000565556 TMEM131LA2VDJ0 1609 aa13.21□□□□□ -0.3
CNEP1R1-206ENST00000565556 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
CNEP1R1-206ENST00000565556 C3P01024 1663 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms