RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 ANP32EQ9BTT0 268 aa25.61■■□□□ 1.69
CDH5-205ENST00000565334 HNRNPUQ00839 825 aaKnown RBP eCLIP25.6■■□□□ 1.69
CDH5-205ENST00000565334 BCORL1Q5H9F3 1711 aa25.59■■□□□ 1.69
CDH5-205ENST00000565334 ATP10AO60312 1499 aa25.57■■□□□ 1.68
CDH5-205ENST00000565334 CARD11Q9BXL7 1154 aa25.57■■□□□ 1.68
CDH5-205ENST00000565334 FKBP8Q14318 412 aa25.57■■□□□ 1.68
CDH5-205ENST00000565334 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
CDH5-205ENST00000565334 DHX29Q7Z478 1369 aaKnown RBP25.54■■□□□ 1.68
CDH5-205ENST00000565334 DCAF11Q8TEB1 546 aa25.54■■□□□ 1.68
CDH5-205ENST00000565334 MRS2Q9HD23 443 aa25.52■■□□□ 1.68
CDH5-205ENST00000565334 PLA2R1Q13018 1463 aa25.52■■□□□ 1.68
CDH5-205ENST00000565334 PRAG1Q86YV5 1406 aa25.52■■□□□ 1.68
CDH5-205ENST00000565334 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
CDH5-205ENST00000565334 BCL11AQ9H165 835 aa25.49■■□□□ 1.67
CDH5-205ENST00000565334 LAMC1P11047 1609 aa25.49■■□□□ 1.67
CDH5-205ENST00000565334 KDM2AQ9Y2K7 1162 aa25.48■■□□□ 1.67
CDH5-205ENST00000565334 WDR7Q9Y4E6 1490 aa25.48■■□□□ 1.67
CDH5-205ENST00000565334 TRAPPC8Q9Y2L5 1435 aa25.47■■□□□ 1.67
CDH5-205ENST00000565334 GPRASP1Q5JY77 1395 aa25.46■■□□□ 1.67
CDH5-205ENST00000565334 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
CDH5-205ENST00000565334 EIF2AK4Q9P2K8 1649 aaKnown RBP25.46■■□□□ 1.67
CDH5-205ENST00000565334 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.45■■□□□ 1.66
CDH5-205ENST00000565334 A2MP01023 1474 aa25.44■■□□□ 1.66
CDH5-205ENST00000565334 ZBED9Q6R2W3 1325 aa25.44■■□□□ 1.66
CDH5-205ENST00000565334 KTN1Q86UP2 1357 aaKnown RBP25.44■■□□□ 1.66
CDH5-205ENST00000565334 ZFYVE16Q7Z3T8 1539 aa25.42■■□□□ 1.66
CDH5-205ENST00000565334 SPAG9O60271 1321 aaKnown RBP25.42■■□□□ 1.66
CDH5-205ENST00000565334 ABCA9Q8IUA7 1624 aa25.41■■□□□ 1.66
CDH5-205ENST00000565334 ST20-MTHFSA0A0A6YYL1 179 aa25.41■■□□□ 1.66
CDH5-205ENST00000565334 FAM9BQ8IZU0 186 aa25.39■■□□□ 1.66
CDH5-205ENST00000565334 E9PCH4 1651 aa25.37■■□□□ 1.65
CDH5-205ENST00000565334 ERICH6BQ5W0A0 696 aa25.37■■□□□ 1.65
CDH5-205ENST00000565334 POLR3GLQ9BT43 218 aa25.37■■□□□ 1.65
CDH5-205ENST00000565334 PRDM15P57071 1507 aaPredicted RBP25.37■■□□□ 1.65
CDH5-205ENST00000565334 BCANQ96GW7 911 aa25.36■■□□□ 1.65
CDH5-205ENST00000565334 DEPDC5O75140 1603 aa25.36■■□□□ 1.65
CDH5-205ENST00000565334 FANCAO15360 1455 aa25.35■■□□□ 1.65
CDH5-205ENST00000565334 INO80Q9ULG1 1556 aaPredicted RBP25.34■■□□□ 1.65
CDH5-205ENST00000565334 STAC3Q96MF2 364 aa25.33■■□□□ 1.65
CDH5-205ENST00000565334 TSHZ2Q9NRE2 1034 aa25.33■■□□□ 1.64
CDH5-205ENST00000565334 TRPM2O94759 1503 aa25.32■■□□□ 1.64
CDH5-205ENST00000565334 ATP7AQ04656 1500 aa25.32■■□□□ 1.64
CDH5-205ENST00000565334 RGL3Q3MIN7 710 aa25.32■■□□□ 1.64
CDH5-205ENST00000565334 RALBP1Q15311 655 aa25.31■■□□□ 1.64
CDH5-205ENST00000565334 PTPRTO14522 1441 aa25.3■■□□□ 1.64
CDH5-205ENST00000565334 RNF17Q9BXT8 1623 aaKnown RBP25.29■■□□□ 1.64
CDH5-205ENST00000565334 AFAP1Q8N556 730 aa25.28■■□□□ 1.64
CDH5-205ENST00000565334 COL17A1Q9UMD9 1497 aaPredicted RBP25.28■■□□□ 1.64
CDH5-205ENST00000565334 TET3O43151 1660 aa25.28■■□□□ 1.64
CDH5-205ENST00000565334 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
CDH5-205ENST00000565334 KANK1Q14678 1352 aa25.28■■□□□ 1.64
CDH5-205ENST00000565334 ADGRL1O94910 1474 aa25.27■■□□□ 1.64
CDH5-205ENST00000565334 BRD4O60885 1362 aaPredicted RBP25.26■■□□□ 1.63
CDH5-205ENST00000565334 ASXL2Q76L83 1435 aa25.26■■□□□ 1.63
CDH5-205ENST00000565334 NEURL4Q96JN8 1562 aa25.25■■□□□ 1.63
CDH5-205ENST00000565334 MYBBP1AQ9BQG0 1328 aaKnown RBP25.25■■□□□ 1.63
CDH5-205ENST00000565334 NBPF1Q3BBV0 1214 aa25.24■■□□□ 1.63
CDH5-205ENST00000565334 SPHKAPQ2M3C7 1700 aa25.23■■□□□ 1.63
CDH5-205ENST00000565334 SCAPERQ9BY12 1400 aa25.23■■□□□ 1.63
CDH5-205ENST00000565334 CEP152O94986 1710 aa25.23■■□□□ 1.63
CDH5-205ENST00000565334 WASHC2CQ9Y4E1 1318 aa25.22■■□□□ 1.63
CDH5-205ENST00000565334 TMC1Q8TDI8 760 aa25.21■■□□□ 1.63
CDH5-205ENST00000565334 PNISRQ8TF01 805 aaKnown RBP25.21■■□□□ 1.63
CDH5-205ENST00000565334 MADDQ8WXG6 1647 aa25.2■■□□□ 1.62
CDH5-205ENST00000565334 SMG6Q86US8 1419 aaKnown RBP25.2■■□□□ 1.62
CDH5-205ENST00000565334 TESK2Q96S53 571 aa25.19■■□□□ 1.62
CDH5-205ENST00000565334 LRPPRCP42704 1394 aaKnown RBP25.18■■□□□ 1.62
CDH5-205ENST00000565334 TMF1P82094 1093 aa25.17■■□□□ 1.62
CDH5-205ENST00000565334 PARD3Q8TEW0 1356 aa25.17■■□□□ 1.62
CDH5-205ENST00000565334 CFAP74Q9C0B2 1584 aa25.16■■□□□ 1.62
CDH5-205ENST00000565334 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
CDH5-205ENST00000565334 ZNF518AQ6AHZ1 1483 aa25.14■■□□□ 1.62
CDH5-205ENST00000565334 NPM1P06748 294 aaKnown RBP eCLIP25.14■■□□□ 1.62
CDH5-205ENST00000565334 OSCARQ8IYS5 282 aa25.13■■□□□ 1.61
CDH5-205ENST00000565334 DISP3Q9P2K9 1392 aa25.13■■□□□ 1.61
CDH5-205ENST00000565334 MROH1Q8NDA8 1641 aa25.13■■□□□ 1.61
CDH5-205ENST00000565334 IQGAP1P46940 1657 aa25.12■■□□□ 1.61
CDH5-205ENST00000565334 PER1O15534 1290 aaPredicted RBP25.12■■□□□ 1.61
CDH5-205ENST00000565334 NLRP13Q86W25 1043 aa25.12■■□□□ 1.61
CDH5-205ENST00000565334 LMTK2Q8IWU2 1503 aa25.11■■□□□ 1.61
CDH5-205ENST00000565334 PPP4R2Q9NY27 417 aa25.11■■□□□ 1.61
CDH5-205ENST00000565334 KIF3BO15066 747 aa25.1■■□□□ 1.61
CDH5-205ENST00000565334 NUDCQ9Y266 331 aa25.1■■□□□ 1.61
CDH5-205ENST00000565334 KIAA1210Q9ULL0 1709 aa25.1■■□□□ 1.61
CDH5-205ENST00000565334 SCAF11Q99590 1463 aaKnown RBP25.09■■□□□ 1.61
CDH5-205ENST00000565334 INSRP06213 1382 aa25.09■■□□□ 1.61
CDH5-205ENST00000565334 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.61
CDH5-205ENST00000565334 CNGB1Q14028 1251 aaPredicted RBP25.08■■□□□ 1.61
CDH5-205ENST00000565334 MYT1LQ9UL68 1186 aa25.08■■□□□ 1.61
CDH5-205ENST00000565334 EFCAB6Q5THR3 1501 aa25.08■■□□□ 1.6
CDH5-205ENST00000565334 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
CDH5-205ENST00000565334 MYOM2P54296 1465 aa25.06■■□□□ 1.6
CDH5-205ENST00000565334 CDCA8Q53HL2 280 aa25.06■■□□□ 1.6
CDH5-205ENST00000565334 EIF3AQ14152 1382 aaKnown RBP25.04■■□□□ 1.6
CDH5-205ENST00000565334 SLC24A1O60721 1099 aa25.03■■□□□ 1.6
CDH5-205ENST00000565334 MLH3Q9UHC1 1453 aa25.03■■□□□ 1.6
CDH5-205ENST00000565334 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
CDH5-205ENST00000565334 IRX6P78412 446 aaPredicted RBP25.03■■□□□ 1.6
CDH5-205ENST00000565334 CD109Q6YHK3 1445 aa25.02■■□□□ 1.6
CDH5-205ENST00000565334 RNF123Q5XPI4 1314 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms