RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 ABCC5O15440 1437 aa23.16■■□□□ 1.3
USB1-210ENST00000565151 KDM5DQ9BY66 1539 aa23.15■■□□□ 1.3
USB1-210ENST00000565151 CEP170BQ9Y4F5 1589 aaPredicted RBP23.14■■□□□ 1.3
USB1-210ENST00000565151 FBXO41Q8TF61 875 aa23.14■■□□□ 1.29
USB1-210ENST00000565151 EIF2AK4Q9P2K8 1649 aaKnown RBP23.14■■□□□ 1.29
USB1-210ENST00000565151 TCOF1Q13428 1488 aaKnown RBP23.13■■□□□ 1.29
USB1-210ENST00000565151 FGD6Q6ZV73 1430 aa23.13■■□□□ 1.29
USB1-210ENST00000565151 CFAP65Q6ZU64 1925 aaKnown RBP23.13■■□□□ 1.29
USB1-210ENST00000565151 DNMT1P26358 1616 aaKnown RBP23.12■■□□□ 1.29
USB1-210ENST00000565151 CEP152O94986 1710 aa23.12■■□□□ 1.29
USB1-210ENST00000565151 FBXO31Q5XUX0 539 aaPredicted RBP23.12■■□□□ 1.29
USB1-210ENST00000565151 FAM135AQ9P2D6 1515 aa23.11■■□□□ 1.29
USB1-210ENST00000565151 PTPRTO14522 1441 aa23.1■■□□□ 1.29
USB1-210ENST00000565151 PZPP20742 1482 aa23.1■■□□□ 1.29
USB1-210ENST00000565151 APLP2Q06481 763 aa23.09■■□□□ 1.29
USB1-210ENST00000565151 ABCC3O15438 1527 aa23.08■■□□□ 1.29
USB1-210ENST00000565151 SHANK2Q9UPX8 1470 aa23.08■■□□□ 1.29
USB1-210ENST00000565151 DAPK1P53355 1430 aa23.08■■□□□ 1.28
USB1-210ENST00000565151 CERKQ8TCT0 537 aa23.07■■□□□ 1.28
USB1-210ENST00000565151 DUOX2Q9NRD8 1548 aa23.07■■□□□ 1.28
USB1-210ENST00000565151 ZC3H13Q5T200 1668 aaKnown RBP23.06■■□□□ 1.28
USB1-210ENST00000565151 NCKAP5LQ9HCH0 1330 aa23.06■■□□□ 1.28
USB1-210ENST00000565151 WASHC2CQ9Y4E1 1318 aa23.06■■□□□ 1.28
USB1-210ENST00000565151 LTBP4Q8N2S1 1624 aa23.05■■□□□ 1.28
USB1-210ENST00000565151 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
USB1-210ENST00000565151 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
USB1-210ENST00000565151 TNRQ92752 1358 aa23.02■■□□□ 1.28
USB1-210ENST00000565151 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
USB1-210ENST00000565151 PLA2R1Q13018 1463 aa23.02■■□□□ 1.28
USB1-210ENST00000565151 DEPDC5O75140 1603 aa23.01■■□□□ 1.27
USB1-210ENST00000565151 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
USB1-210ENST00000565151 POLR1AO95602 1720 aaPredicted RBP23.01■■□□□ 1.27
USB1-210ENST00000565151 PRDM15P57071 1507 aaPredicted RBP22.99■■□□□ 1.27
USB1-210ENST00000565151 SPATA31D1Q6ZQQ2 1576 aa22.99■■□□□ 1.27
USB1-210ENST00000565151 NEURL4Q96JN8 1562 aa22.98■■□□□ 1.27
USB1-210ENST00000565151 CHIC2Q9UKJ5 165 aa22.96■■□□□ 1.27
USB1-210ENST00000565151 ERBINQ96RT1 1412 aa22.96■■□□□ 1.27
USB1-210ENST00000565151 ERVK-7P63135 1459 aa22.94■■□□□ 1.26
USB1-210ENST00000565151 PKD2Q13563 968 aa22.92■■□□□ 1.26
USB1-210ENST00000565151 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
USB1-210ENST00000565151 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
USB1-210ENST00000565151 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
USB1-210ENST00000565151 UBR1Q8IWV7 1749 aa22.91■■□□□ 1.26
USB1-210ENST00000565151 ZNF335Q9H4Z2 1342 aaPredicted RBP22.9■■□□□ 1.26
USB1-210ENST00000565151 UGGT1Q9NYU2 1555 aa22.89■■□□□ 1.26
USB1-210ENST00000565151 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.25
USB1-210ENST00000565151 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
USB1-210ENST00000565151 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.88■■□□□ 1.25
USB1-210ENST00000565151 PPARGC1BQ86YN6 1023 aaKnown RBP22.87■■□□□ 1.25
USB1-210ENST00000565151 ARHGAP31Q2M1Z3 1444 aa22.86■■□□□ 1.25
USB1-210ENST00000565151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.85■■□□□ 1.25
USB1-210ENST00000565151 LMTK2Q8IWU2 1503 aa22.83■■□□□ 1.25
USB1-210ENST00000565151 PIK3C2BO00750 1634 aa22.82■■□□□ 1.24
USB1-210ENST00000565151 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
USB1-210ENST00000565151 MED14O60244 1454 aa22.8■■□□□ 1.24
USB1-210ENST00000565151 THEMISQ8N1K5 641 aaPredicted RBP22.8■■□□□ 1.24
USB1-210ENST00000565151 IQGAP1P46940 1657 aa22.8■■□□□ 1.24
USB1-210ENST00000565151 SYNMO15061 1565 aa22.8■■□□□ 1.24
USB1-210ENST00000565151 IQSEC2Q5JU85 1478 aa22.79■■□□□ 1.24
USB1-210ENST00000565151 EFCAB6Q5THR3 1501 aa22.78■■□□□ 1.24
USB1-210ENST00000565151 ANKRD50Q9ULJ7 1429 aa22.77■■□□□ 1.24
USB1-210ENST00000565151 ANKLE2Q86XL3 938 aa22.76■■□□□ 1.23
USB1-210ENST00000565151 NPHP4O75161 1426 aaPredicted RBP22.75■■□□□ 1.23
USB1-210ENST00000565151 UNC13BO14795 1591 aa22.75■■□□□ 1.23
USB1-210ENST00000565151 MYO5BQ9ULV0 1848 aa22.75■■□□□ 1.23
USB1-210ENST00000565151 ARHGAP23Q9P227 1491 aa22.74■■□□□ 1.23
USB1-210ENST00000565151 KANK1Q14678 1352 aa22.74■■□□□ 1.23
USB1-210ENST00000565151 SLIT1O75093 1534 aa22.72■■□□□ 1.23
USB1-210ENST00000565151 TET3O43151 1660 aa22.72■■□□□ 1.23
USB1-210ENST00000565151 KDM5AP29375 1690 aaKnown RBP22.72■■□□□ 1.23
USB1-210ENST00000565151 NOS1P29475 1434 aa22.72■■□□□ 1.23
USB1-210ENST00000565151 GCC2Q8IWJ2 1684 aa22.71■■□□□ 1.23
USB1-210ENST00000565151 LTKP29376 864 aa22.71■■□□□ 1.23
USB1-210ENST00000565151 E9PCH4 1651 aa22.69■■□□□ 1.22
USB1-210ENST00000565151 ROCK1Q13464 1354 aa22.69■■□□□ 1.22
USB1-210ENST00000565151 IDI1Q13907 227 aa22.69■■□□□ 1.22
USB1-210ENST00000565151 SCAF11Q99590 1463 aaKnown RBP22.67■■□□□ 1.22
USB1-210ENST00000565151 ALKQ9UM73 1620 aa22.66■■□□□ 1.22
USB1-210ENST00000565151 CPS1P31327 1500 aa22.66■■□□□ 1.22
USB1-210ENST00000565151 IQGAP3Q86VI3 1631 aa22.65■■□□□ 1.22
USB1-210ENST00000565151 ITGAEP38570 1179 aa22.65■■□□□ 1.22
USB1-210ENST00000565151 XIRP1Q702N8 1843 aaKnown RBP22.65■■□□□ 1.22
USB1-210ENST00000565151 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
USB1-210ENST00000565151 ADGRB3O60242 1522 aa22.62■■□□□ 1.21
USB1-210ENST00000565151 RPRD2Q5VT52 1461 aaKnown RBP22.62■■□□□ 1.21
USB1-210ENST00000565151 TXNDC2Q86VQ3 553 aa22.62■■□□□ 1.21
USB1-210ENST00000565151 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
USB1-210ENST00000565151 UBAP1LF5GYI3 381 aa22.6■■□□□ 1.21
USB1-210ENST00000565151 TMEM131LA2VDJ0 1609 aa22.6■■□□□ 1.21
USB1-210ENST00000565151 LRRC7Q96NW7 1537 aa22.58■■□□□ 1.21
USB1-210ENST00000565151 SLC52A1Q9NWF4 448 aa22.53■■□□□ 1.2
USB1-210ENST00000565151 ZFYVE9O95405 1425 aa22.52■■□□□ 1.2
USB1-210ENST00000565151 STAG3Q9UJ98 1225 aa22.52■■□□□ 1.2
USB1-210ENST00000565151 NUP155O75694 1391 aa22.51■■□□□ 1.19
USB1-210ENST00000565151 EID1Q9Y6B2 187 aa22.5■■□□□ 1.19
USB1-210ENST00000565151 SPHKAPQ2M3C7 1700 aa22.49■■□□□ 1.19
USB1-210ENST00000565151 NAIPQ13075 1403 aa22.48■■□□□ 1.19
USB1-210ENST00000565151 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
USB1-210ENST00000565151 CHD2O14647 1828 aaKnown RBP22.46■■□□□ 1.19
USB1-210ENST00000565151 PIP4K2BP78356 416 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms