RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CEP170BQ9Y4F5 1589 aaPredicted RBP15.73■□□□□ 0.11
CMTM3-209ENST00000565003 CAMSAP1Q5T5Y3 1602 aa15.72■□□□□ 0.11
CMTM3-209ENST00000565003 RNF17Q9BXT8 1623 aaKnown RBP15.72■□□□□ 0.11
CMTM3-209ENST00000565003 FGD6Q6ZV73 1430 aa15.72■□□□□ 0.11
CMTM3-209ENST00000565003 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
CMTM3-209ENST00000565003 CROCC2H7BZ55 1655 aa15.72■□□□□ 0.11
CMTM3-209ENST00000565003 PTPRTO14522 1441 aa15.71■□□□□ 0.11
CMTM3-209ENST00000565003 ABCC5O15440 1437 aa15.71■□□□□ 0.11
CMTM3-209ENST00000565003 PZPP20742 1482 aa15.71■□□□□ 0.1
CMTM3-209ENST00000565003 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.1
CMTM3-209ENST00000565003 SHANK2Q9UPX8 1470 aa15.71■□□□□ 0.1
CMTM3-209ENST00000565003 WASHC2CQ9Y4E1 1318 aa15.7■□□□□ 0.1
CMTM3-209ENST00000565003 EIF2AK4Q9P2K8 1649 aaKnown RBP15.7■□□□□ 0.1
CMTM3-209ENST00000565003 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
CMTM3-209ENST00000565003 FBXO31Q5XUX0 539 aaPredicted RBP15.69■□□□□ 0.1
CMTM3-209ENST00000565003 CERKQ8TCT0 537 aa15.69■□□□□ 0.1
CMTM3-209ENST00000565003 DAPK1P53355 1430 aa15.68■□□□□ 0.1
CMTM3-209ENST00000565003 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
CMTM3-209ENST00000565003 ABCC3O15438 1527 aa15.68■□□□□ 0.1
CMTM3-209ENST00000565003 DUOX2Q9NRD8 1548 aa15.68■□□□□ 0.1
CMTM3-209ENST00000565003 A2ML1A8K2U0 1454 aa15.67■□□□□ 0.1
CMTM3-209ENST00000565003 PLA2R1Q13018 1463 aa15.67■□□□□ 0.1
CMTM3-209ENST00000565003 KIF15Q9NS87 1388 aa15.67■□□□□ 0.1
CMTM3-209ENST00000565003 TNRQ92752 1358 aa15.66■□□□□ 0.1
CMTM3-209ENST00000565003 ZC3H13Q5T200 1668 aaKnown RBP15.66■□□□□ 0.1
CMTM3-209ENST00000565003 NCKAP5LQ9HCH0 1330 aa15.65■□□□□ 0.1
CMTM3-209ENST00000565003 ERBINQ96RT1 1412 aa15.63■□□□□ 0.09
CMTM3-209ENST00000565003 RRP7BPQ9NSQ0 103 aa15.63■□□□□ 0.09
CMTM3-209ENST00000565003 CEP152O94986 1710 aa15.63■□□□□ 0.09
CMTM3-209ENST00000565003 LTBP4Q8N2S1 1624 aa15.62■□□□□ 0.09
CMTM3-209ENST00000565003 PRDM15P57071 1507 aaPredicted RBP15.62■□□□□ 0.09
CMTM3-209ENST00000565003 SPATA31D1Q6ZQQ2 1576 aa15.61■□□□□ 0.09
CMTM3-209ENST00000565003 NLRP1Q9C000 1473 aa15.6■□□□□ 0.09
CMTM3-209ENST00000565003 PKD2Q13563 968 aa15.6■□□□□ 0.09
CMTM3-209ENST00000565003 CHIC2Q9UKJ5 165 aa15.6■□□□□ 0.09
CMTM3-209ENST00000565003 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
CMTM3-209ENST00000565003 DEPDC5O75140 1603 aa15.59■□□□□ 0.09
CMTM3-209ENST00000565003 ANKRD30AQ9BXX3 1397 aa15.59■□□□□ 0.09
CMTM3-209ENST00000565003 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.08
CMTM3-209ENST00000565003 UGGT1Q9NYU2 1555 aa15.58■□□□□ 0.08
CMTM3-209ENST00000565003 FAM50AQ14320 339 aaKnown RBP15.57■□□□□ 0.08
CMTM3-209ENST00000565003 ZNF335Q9H4Z2 1342 aaPredicted RBP15.57■□□□□ 0.08
CMTM3-209ENST00000565003 ADGRL2O95490 1459 aa15.57■□□□□ 0.08
CMTM3-209ENST00000565003 POLR1AO95602 1720 aaPredicted RBP15.57■□□□□ 0.08
CMTM3-209ENST00000565003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.56■□□□□ 0.08
CMTM3-209ENST00000565003 ARHGAP31Q2M1Z3 1444 aa15.54■□□□□ 0.08
CMTM3-209ENST00000565003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.54■□□□□ 0.08
CMTM3-209ENST00000565003 THEMISQ8N1K5 641 aaPredicted RBP15.53■□□□□ 0.08
CMTM3-209ENST00000565003 VWDEQ8N2E2 1590 aa15.53■□□□□ 0.08
CMTM3-209ENST00000565003 CFAP65Q6ZU64 1925 aaKnown RBP15.53■□□□□ 0.08
CMTM3-209ENST00000565003 IQSEC2Q5JU85 1478 aa15.52■□□□□ 0.08
CMTM3-209ENST00000565003 KANK1Q14678 1352 aa15.51■□□□□ 0.07
CMTM3-209ENST00000565003 LMTK2Q8IWU2 1503 aa15.51■□□□□ 0.07
CMTM3-209ENST00000565003 ANKLE2Q86XL3 938 aa15.5■□□□□ 0.07
CMTM3-209ENST00000565003 UBR1Q8IWV7 1749 aa15.49■□□□□ 0.07
CMTM3-209ENST00000565003 MED14O60244 1454 aa15.49■□□□□ 0.07
CMTM3-209ENST00000565003 PPARGC1BQ86YN6 1023 aaKnown RBP15.49■□□□□ 0.07
CMTM3-209ENST00000565003 ANKRD50Q9ULJ7 1429 aa15.49■□□□□ 0.07
CMTM3-209ENST00000565003 NPHP4O75161 1426 aaPredicted RBP15.48■□□□□ 0.07
CMTM3-209ENST00000565003 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
CMTM3-209ENST00000565003 IQGAP1P46940 1657 aa15.46■□□□□ 0.07
CMTM3-209ENST00000565003 PIK3C2BO00750 1634 aa15.45■□□□□ 0.06
CMTM3-209ENST00000565003 SYNMO15061 1565 aa15.45■□□□□ 0.06
CMTM3-209ENST00000565003 ROCK1Q13464 1354 aa15.44■□□□□ 0.06
CMTM3-209ENST00000565003 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
CMTM3-209ENST00000565003 NOS1P29475 1434 aa15.43■□□□□ 0.06
CMTM3-209ENST00000565003 SLIT1O75093 1534 aa15.43■□□□□ 0.06
CMTM3-209ENST00000565003 SCAF11Q99590 1463 aaKnown RBP15.43■□□□□ 0.06
CMTM3-209ENST00000565003 CPS1P31327 1500 aa15.43■□□□□ 0.06
CMTM3-209ENST00000565003 UNC13BO14795 1591 aa15.42■□□□□ 0.06
CMTM3-209ENST00000565003 LTKP29376 864 aa15.4■□□□□ 0.06
CMTM3-209ENST00000565003 ITGAEP38570 1179 aa15.4■□□□□ 0.06
CMTM3-209ENST00000565003 IDI1Q13907 227 aa15.4■□□□□ 0.06
CMTM3-209ENST00000565003 TET3O43151 1660 aa15.4■□□□□ 0.06
CMTM3-209ENST00000565003 RPRD2Q5VT52 1461 aaKnown RBP15.4■□□□□ 0.06
CMTM3-209ENST00000565003 KDM5AP29375 1690 aaKnown RBP15.39■□□□□ 0.05
CMTM3-209ENST00000565003 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
CMTM3-209ENST00000565003 STRCP1A6NGW2 1772 aa15.39■□□□□ 0.05
CMTM3-209ENST00000565003 TMEM2Q9UHN6 1383 aa15.38■□□□□ 0.05
CMTM3-209ENST00000565003 TXNDC2Q86VQ3 553 aa15.38■□□□□ 0.05
CMTM3-209ENST00000565003 ADGRB3O60242 1522 aa15.38■□□□□ 0.05
CMTM3-209ENST00000565003 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
CMTM3-209ENST00000565003 GCC2Q8IWJ2 1684 aa15.37■□□□□ 0.05
CMTM3-209ENST00000565003 RRBP1Q9P2E9 1410 aaKnown RBP15.36■□□□□ 0.05
CMTM3-209ENST00000565003 IQGAP3Q86VI3 1631 aa15.35■□□□□ 0.05
CMTM3-209ENST00000565003 EID1Q9Y6B2 187 aa15.35■□□□□ 0.05
CMTM3-209ENST00000565003 E9PCH4 1651 aa15.35■□□□□ 0.05
CMTM3-209ENST00000565003 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.05
CMTM3-209ENST00000565003 SLC52A1Q9NWF4 448 aa15.33■□□□□ 0.04
CMTM3-209ENST00000565003 ALKQ9UM73 1620 aa15.32■□□□□ 0.04
CMTM3-209ENST00000565003 NUP155O75694 1391 aa15.31■□□□□ 0.04
CMTM3-209ENST00000565003 TMEM131LA2VDJ0 1609 aa15.3■□□□□ 0.04
CMTM3-209ENST00000565003 MYO5BQ9ULV0 1848 aa15.3■□□□□ 0.04
CMTM3-209ENST00000565003 ZFYVE9O95405 1425 aa15.29■□□□□ 0.04
CMTM3-209ENST00000565003 TOM1O60784 492 aa15.29■□□□□ 0.04
CMTM3-209ENST00000565003 PIP4K2BP78356 416 aa15.28■□□□□ 0.04
CMTM3-209ENST00000565003 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
CMTM3-209ENST00000565003 NAIPQ13075 1403 aa15.26■□□□□ 0.03
CMTM3-209ENST00000565003 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
CMTM3-209ENST00000565003 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms