RNA–Protein interactions for RNA: ENST00000564738.5

NEIL1-205, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-205ENST00000564738 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
NEIL1-205ENST00000564738 FBXO31Q5XUX0 539 aaPredicted RBP29.05■■■□□ 2.24
NEIL1-205ENST00000564738 MROH2AA6NES4 1674 aa29.05■■■□□ 2.24
NEIL1-205ENST00000564738 PTPRKQ15262 1439 aa29.03■■■□□ 2.24
NEIL1-205ENST00000564738 CROCC2H7BZ55 1655 aa29.02■■■□□ 2.24
NEIL1-205ENST00000564738 DUOX2Q9NRD8 1548 aa29.01■■■□□ 2.23
NEIL1-205ENST00000564738 ANKRD30AQ9BXX3 1397 aa29.01■■■□□ 2.23
NEIL1-205ENST00000564738 NPATQ14207 1427 aa29■■■□□ 2.23
NEIL1-205ENST00000564738 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.99■■■□□ 2.231e-6■■■□□ 14.7
NEIL1-205ENST00000564738 ITGAEP38570 1179 aa28.97■■■□□ 2.23
NEIL1-205ENST00000564738 KDM5DQ9BY66 1539 aa28.97■■■□□ 2.23
NEIL1-205ENST00000564738 NCOA1Q15788 1441 aa28.96■■■□□ 2.23
NEIL1-205ENST00000564738 RNF17Q9BXT8 1623 aaKnown RBP28.91■■■□□ 2.22
NEIL1-205ENST00000564738 EIF2AK4Q9P2K8 1649 aaKnown RBP28.91■■■□□ 2.22
NEIL1-205ENST00000564738 ERBINQ96RT1 1412 aa28.91■■■□□ 2.22
NEIL1-205ENST00000564738 MROH1Q8NDA8 1641 aa28.89■■■□□ 2.22
NEIL1-205ENST00000564738 PZPP20742 1482 aa28.89■■■□□ 2.22
NEIL1-205ENST00000564738 ABCC3O15438 1527 aa28.89■■■□□ 2.21
NEIL1-205ENST00000564738 TNRQ92752 1358 aa28.88■■■□□ 2.21
NEIL1-205ENST00000564738 ADGRL2O95490 1459 aa28.87■■■□□ 2.21
NEIL1-205ENST00000564738 FAM135AQ9P2D6 1515 aa28.86■■■□□ 2.21
NEIL1-205ENST00000564738 NCKAP5LQ9HCH0 1330 aa28.85■■■□□ 2.21
NEIL1-205ENST00000564738 STRCQ7RTU9 1775 aa28.83■■■□□ 2.21
NEIL1-205ENST00000564738 DMRT2Q9Y5R5 561 aa28.82■■■□□ 2.2
NEIL1-205ENST00000564738 MYO3AQ8NEV4 1616 aa28.82■■■□□ 2.2
NEIL1-205ENST00000564738 CEP152O94986 1710 aa28.8■■■□□ 2.2
NEIL1-205ENST00000564738 CAMSAP1Q5T5Y3 1602 aa28.8■■■□□ 2.2
NEIL1-205ENST00000564738 CEP170BQ9Y4F5 1589 aaPredicted RBP28.79■■■□□ 2.2
NEIL1-205ENST00000564738 ANKRD50Q9ULJ7 1429 aa28.79■■■□□ 2.2
NEIL1-205ENST00000564738 KANK1Q14678 1352 aa28.79■■■□□ 2.2
NEIL1-205ENST00000564738 ILDR1Q86SU0 546 aaPredicted RBP28.79■■■□□ 2.2
NEIL1-205ENST00000564738 A2ML1A8K2U0 1454 aa28.78■■■□□ 2.2
NEIL1-205ENST00000564738 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.76■■■□□ 2.2
NEIL1-205ENST00000564738 PRDM15P57071 1507 aaPredicted RBP28.76■■■□□ 2.19
NEIL1-205ENST00000564738 CFAP65Q6ZU64 1925 aaKnown RBP28.76■■■□□ 2.19
NEIL1-205ENST00000564738 ZC3H13Q5T200 1668 aaKnown RBP28.76■■■□□ 2.19
NEIL1-205ENST00000564738 ROCK1Q13464 1354 aa28.73■■■□□ 2.19
NEIL1-205ENST00000564738 ERVK-7P63135 1459 aa28.72■■■□□ 2.19
NEIL1-205ENST00000564738 RRBP1Q9P2E9 1410 aaKnown RBP28.72■■■□□ 2.19
NEIL1-205ENST00000564738 ZNF142P52746 1687 aaPredicted RBP28.72■■■□□ 2.19
NEIL1-205ENST00000564738 DEPDC5O75140 1603 aa28.72■■■□□ 2.19
NEIL1-205ENST00000564738 PTPRTO14522 1441 aa28.7■■■□□ 2.19
NEIL1-205ENST00000564738 PKD2Q13563 968 aa28.69■■■□□ 2.18
NEIL1-205ENST00000564738 SPATA31D1Q6ZQQ2 1576 aa28.69■■■□□ 2.18
NEIL1-205ENST00000564738 ARHGAP31Q2M1Z3 1444 aa28.69■■■□□ 2.18
NEIL1-205ENST00000564738 THEMISQ8N1K5 641 aaPredicted RBP28.68■■■□□ 2.18
NEIL1-205ENST00000564738 NLRP1Q9C000 1473 aa28.66■■■□□ 2.18
NEIL1-205ENST00000564738 VWDEQ8N2E2 1590 aa28.66■■■□□ 2.18
NEIL1-205ENST00000564738 PLA2R1Q13018 1463 aa28.66■■■□□ 2.18
NEIL1-205ENST00000564738 CERKQ8TCT0 537 aa28.65■■■□□ 2.18
NEIL1-205ENST00000564738 LMTK2Q8IWU2 1503 aa28.64■■■□□ 2.17
NEIL1-205ENST00000564738 UGGT1Q9NYU2 1555 aa28.63■■■□□ 2.17
NEIL1-205ENST00000564738 ANKLE2Q86XL3 938 aa28.61■■■□□ 2.17
NEIL1-205ENST00000564738 IDI1Q13907 227 aa28.58■■■□□ 2.17
NEIL1-205ENST00000564738 FBXO41Q8TF61 875 aa28.58■■■□□ 2.17
NEIL1-205ENST00000564738 NUP155O75694 1391 aa28.56■■■□□ 2.16
NEIL1-205ENST00000564738 ZNF335Q9H4Z2 1342 aaPredicted RBP28.55■■■□□ 2.16
NEIL1-205ENST00000564738 STAG3Q9UJ98 1225 aa28.55■■■□□ 2.16
NEIL1-205ENST00000564738 EFCAB6Q5THR3 1501 aa28.53■■■□□ 2.16
NEIL1-205ENST00000564738 UNC13BO14795 1591 aa28.52■■■□□ 2.16
NEIL1-205ENST00000564738 NOS1P29475 1434 aa28.52■■■□□ 2.16
NEIL1-205ENST00000564738 NAIPQ13075 1403 aa28.49■■■□□ 2.15
NEIL1-205ENST00000564738 LTKP29376 864 aa28.48■■■□□ 2.15
NEIL1-205ENST00000564738 TXNDC2Q86VQ3 553 aa28.48■■■□□ 2.15
NEIL1-205ENST00000564738 NEURL4Q96JN8 1562 aa28.48■■■□□ 2.15
NEIL1-205ENST00000564738 SYNMO15061 1565 aa28.47■■■□□ 2.15
NEIL1-205ENST00000564738 LTBP4Q8N2S1 1624 aa28.47■■■□□ 2.15
NEIL1-205ENST00000564738 UBR1Q8IWV7 1749 aa28.46■■■□□ 2.15
NEIL1-205ENST00000564738 TET3O43151 1660 aa28.45■■■□□ 2.15
NEIL1-205ENST00000564738 NPHP4O75161 1426 aaPredicted RBP28.45■■■□□ 2.15
NEIL1-205ENST00000564738 PIK3C2BO00750 1634 aa28.45■■■□□ 2.14
NEIL1-205ENST00000564738 SLC52A1Q9NWF4 448 aa28.45■■■□□ 2.14
NEIL1-205ENST00000564738 POLR1AO95602 1720 aaPredicted RBP28.43■■■□□ 2.14
NEIL1-205ENST00000564738 RPRD2Q5VT52 1461 aaKnown RBP28.42■■■□□ 2.14
NEIL1-205ENST00000564738 TRIM52Q96A61 297 aa28.42■■■□□ 2.14
NEIL1-205ENST00000564738 IQGAP3Q86VI3 1631 aa28.41■■■□□ 2.14
NEIL1-205ENST00000564738 CHGAP10645 457 aaKnown RBP28.41■■■□□ 2.14
NEIL1-205ENST00000564738 EID1Q9Y6B2 187 aa28.41■■■□□ 2.14
NEIL1-205ENST00000564738 MED14O60244 1454 aa28.4■■■□□ 2.14
NEIL1-205ENST00000564738 TMEM2Q9UHN6 1383 aa28.39■■■□□ 2.14
NEIL1-205ENST00000564738 GCC2Q8IWJ2 1684 aa28.38■■■□□ 2.13
NEIL1-205ENST00000564738 ARHGAP23Q9P227 1491 aa28.38■■■□□ 2.13
NEIL1-205ENST00000564738 E9PCH4 1651 aa28.38■■■□□ 2.13
NEIL1-205ENST00000564738 HFM1A2PYH4 1435 aa28.37■■■□□ 2.13
NEIL1-205ENST00000564738 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
NEIL1-205ENST00000564738 SCAF11Q99590 1463 aaKnown RBP28.36■■■□□ 2.13
NEIL1-205ENST00000564738 SLIT1O75093 1534 aa28.36■■■□□ 2.13
NEIL1-205ENST00000564738 IQGAP1P46940 1657 aa28.3■■■□□ 2.12
NEIL1-205ENST00000564738 ADGRB3O60242 1522 aa28.3■■■□□ 2.12
NEIL1-205ENST00000564738 NUTM2DQ5VT03 806 aaPredicted RBP28.29■■■□□ 2.12
NEIL1-205ENST00000564738 BCANQ96GW7 911 aa28.27■■■□□ 2.12
NEIL1-205ENST00000564738 SLC26A8Q96RN1 970 aa28.26■■■□□ 2.11
NEIL1-205ENST00000564738 SLC4A1APQ9BWU0 796 aaKnown RBP28.25■■■□□ 2.11
NEIL1-205ENST00000564738 KDM5AP29375 1690 aaKnown RBP28.23■■■□□ 2.11
NEIL1-205ENST00000564738 RIMS2Q9UQ26 1411 aa28.23■■■□□ 2.11
NEIL1-205ENST00000564738 UBAP1LF5GYI3 381 aa28.22■■■□□ 2.11
NEIL1-205ENST00000564738 PPP1R15AO75807 674 aaPredicted RBP28.22■■■□□ 2.11
NEIL1-205ENST00000564738 MYO5BQ9ULV0 1848 aa28.22■■■□□ 2.11
NEIL1-205ENST00000564738 TMEM131LA2VDJ0 1609 aa28.21■■■□□ 2.11
NEIL1-205ENST00000564738 FOXD1Q16676 465 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms