RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 DNMT1P26358 1616 aaKnown RBP20.95■□□□□ 0.94
CNOT1-206ENST00000564557 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.94
CNOT1-206ENST00000564557 C3P01024 1663 aa20.95■□□□□ 0.94
CNOT1-206ENST00000564557 SETD1BQ9UPS6 1966 aaKnown RBP20.94■□□□□ 0.94
CNOT1-206ENST00000564557 CLTCQ00610 1675 aaKnown RBP20.93■□□□□ 0.94
CNOT1-206ENST00000564557 ANKRD30AQ9BXX3 1397 aa20.93■□□□□ 0.94
CNOT1-206ENST00000564557 KIF15Q9NS87 1388 aa20.93■□□□□ 0.94
CNOT1-206ENST00000564557 LMTK3Q96Q04 1460 aa20.93■□□□□ 0.94
CNOT1-206ENST00000564557 MROH2AA6NES4 1674 aa20.93■□□□□ 0.94
CNOT1-206ENST00000564557 HSPA2P54652 639 aa20.92■□□□□ 0.94
CNOT1-206ENST00000564557 UHRF1BP1Q6BDS2 1440 aa20.92■□□□□ 0.94
CNOT1-206ENST00000564557 DUOX2Q9NRD8 1548 aa20.92■□□□□ 0.94
CNOT1-206ENST00000564557 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
CNOT1-206ENST00000564557 PREX1Q8TCU6 1659 aa20.9■□□□□ 0.94
CNOT1-206ENST00000564557 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
CNOT1-206ENST00000564557 NPATQ14207 1427 aa20.87■□□□□ 0.93
CNOT1-206ENST00000564557 EIF2AK4Q9P2K8 1649 aaKnown RBP20.86■□□□□ 0.93
CNOT1-206ENST00000564557 KDM5DQ9BY66 1539 aa20.86■□□□□ 0.93
CNOT1-206ENST00000564557 FAM135AQ9P2D6 1515 aa20.86■□□□□ 0.93
CNOT1-206ENST00000564557 ITGAEP38570 1179 aa20.85■□□□□ 0.93
CNOT1-206ENST00000564557 ERBINQ96RT1 1412 aa20.85■□□□□ 0.93
CNOT1-206ENST00000564557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.933e-8■□□□□ 9.7
CNOT1-206ENST00000564557 NCOA1Q15788 1441 aa20.84■□□□□ 0.93
CNOT1-206ENST00000564557 KANK1Q14678 1352 aa20.82■□□□□ 0.92
CNOT1-206ENST00000564557 PTPRKQ15262 1439 aa20.81■□□□□ 0.92
CNOT1-206ENST00000564557 RNF17Q9BXT8 1623 aaKnown RBP20.81■□□□□ 0.92
CNOT1-206ENST00000564557 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
CNOT1-206ENST00000564557 ADGRL2O95490 1459 aa20.79■□□□□ 0.92
CNOT1-206ENST00000564557 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.78■□□□□ 0.923e-6■□□□□ 9.8
CNOT1-206ENST00000564557 FBXO31Q5XUX0 539 aaPredicted RBP20.78■□□□□ 0.92
CNOT1-206ENST00000564557 PZPP20742 1482 aa20.76■□□□□ 0.91
CNOT1-206ENST00000564557 TNRQ92752 1358 aa20.76■□□□□ 0.91
CNOT1-206ENST00000564557 ZC3H13Q5T200 1668 aaKnown RBP20.76■□□□□ 0.91
CNOT1-206ENST00000564557 ABCC3O15438 1527 aa20.75■□□□□ 0.91
CNOT1-206ENST00000564557 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
CNOT1-206ENST00000564557 ROCK1Q13464 1354 aa20.72■□□□□ 0.91
CNOT1-206ENST00000564557 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
CNOT1-206ENST00000564557 CEP152O94986 1710 aa20.71■□□□□ 0.91
CNOT1-206ENST00000564557 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
CNOT1-206ENST00000564557 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
CNOT1-206ENST00000564557 RRBP1Q9P2E9 1410 aaKnown RBP20.7■□□□□ 0.9
CNOT1-206ENST00000564557 CEP170BQ9Y4F5 1589 aaPredicted RBP20.69■□□□□ 0.9
CNOT1-206ENST00000564557 CAMSAP1Q5T5Y3 1602 aa20.68■□□□□ 0.9
CNOT1-206ENST00000564557 A2ML1A8K2U0 1454 aa20.68■□□□□ 0.9
CNOT1-206ENST00000564557 DEPDC5O75140 1603 aa20.67■□□□□ 0.9
CNOT1-206ENST00000564557 CFAP65Q6ZU64 1925 aaKnown RBP20.66■□□□□ 0.9
CNOT1-206ENST00000564557 THEMISQ8N1K5 641 aaPredicted RBP20.66■□□□□ 0.9
CNOT1-206ENST00000564557 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
CNOT1-206ENST00000564557 NLRP1Q9C000 1473 aa20.65■□□□□ 0.9
CNOT1-206ENST00000564557 ARHGAP31Q2M1Z3 1444 aa20.64■□□□□ 0.89
CNOT1-206ENST00000564557 PKD2Q13563 968 aa20.64■□□□□ 0.89
CNOT1-206ENST00000564557 ERVK-7P63135 1459 aa20.63■□□□□ 0.89
CNOT1-206ENST00000564557 NCKAP5LQ9HCH0 1330 aa20.63■□□□□ 0.89
CNOT1-206ENST00000564557 STRCQ7RTU9 1775 aa20.63■□□□□ 0.89
CNOT1-206ENST00000564557 CNKSR2Q8WXI2 1034 aa20.62■□□□□ 0.89
CNOT1-206ENST00000564557 SPATA31D1Q6ZQQ2 1576 aa20.62■□□□□ 0.89
CNOT1-206ENST00000564557 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
CNOT1-206ENST00000564557 LMTK2Q8IWU2 1503 aa20.6■□□□□ 0.89
CNOT1-206ENST00000564557 PLA2R1Q13018 1463 aa20.6■□□□□ 0.89
CNOT1-206ENST00000564557 PTPRTO14522 1441 aa20.6■□□□□ 0.89
CNOT1-206ENST00000564557 UGGT1Q9NYU2 1555 aa20.59■□□□□ 0.89
CNOT1-206ENST00000564557 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
CNOT1-206ENST00000564557 ANKLE2Q86XL3 938 aa20.58■□□□□ 0.89
CNOT1-206ENST00000564557 NUP155O75694 1391 aa20.58■□□□□ 0.88
CNOT1-206ENST00000564557 UNC13BO14795 1591 aa20.55■□□□□ 0.88
CNOT1-206ENST00000564557 EFCAB6Q5THR3 1501 aa20.54■□□□□ 0.88
CNOT1-206ENST00000564557 RPRD2Q5VT52 1461 aaKnown RBP20.52■□□□□ 0.88
CNOT1-206ENST00000564557 SLC52A1Q9NWF4 448 aa20.52■□□□□ 0.88
CNOT1-206ENST00000564557 TET3O43151 1660 aa20.51■□□□□ 0.87
CNOT1-206ENST00000564557 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
CNOT1-206ENST00000564557 TRIM52Q96A61 297 aa20.51■□□□□ 0.87
CNOT1-206ENST00000564557 IDI1Q13907 227 aa20.5■□□□□ 0.87
CNOT1-206ENST00000564557 CERKQ8TCT0 537 aa20.5■□□□□ 0.87
CNOT1-206ENST00000564557 NAIPQ13075 1403 aa20.5■□□□□ 0.87
CNOT1-206ENST00000564557 EID1Q9Y6B2 187 aa20.49■□□□□ 0.87
CNOT1-206ENST00000564557 GCC2Q8IWJ2 1684 aa20.48■□□□□ 0.87
CNOT1-206ENST00000564557 IQGAP3Q86VI3 1631 aa20.48■□□□□ 0.87
CNOT1-206ENST00000564557 NOS1P29475 1434 aa20.47■□□□□ 0.87
CNOT1-206ENST00000564557 ILDR1Q86SU0 546 aaPredicted RBP20.47■□□□□ 0.87
CNOT1-206ENST00000564557 POLR1AO95602 1720 aaPredicted RBP20.47■□□□□ 0.87
CNOT1-206ENST00000564557 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
CNOT1-206ENST00000564557 TXNDC2Q86VQ3 553 aa20.46■□□□□ 0.87
CNOT1-206ENST00000564557 FBXO41Q8TF61 875 aa20.46■□□□□ 0.87
CNOT1-206ENST00000564557 UBR1Q8IWV7 1749 aa20.46■□□□□ 0.87
CNOT1-206ENST00000564557 CHGAP10645 457 aaKnown RBP20.44■□□□□ 0.86
CNOT1-206ENST00000564557 PIK3C2BO00750 1634 aa20.44■□□□□ 0.86
CNOT1-206ENST00000564557 NPHP4O75161 1426 aaPredicted RBP20.44■□□□□ 0.86
CNOT1-206ENST00000564557 SYNMO15061 1565 aa20.42■□□□□ 0.86
CNOT1-206ENST00000564557 ZNF335Q9H4Z2 1342 aaPredicted RBP20.42■□□□□ 0.86
CNOT1-206ENST00000564557 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
CNOT1-206ENST00000564557 E9PCH4 1651 aa20.41■□□□□ 0.86
CNOT1-206ENST00000564557 KCNA4P22459 653 aa20.4■□□□□ 0.86
CNOT1-206ENST00000564557 TMEM2Q9UHN6 1383 aa20.4■□□□□ 0.86
CNOT1-206ENST00000564557 NEURL4Q96JN8 1562 aa20.39■□□□□ 0.85
CNOT1-206ENST00000564557 MED14O60244 1454 aa20.39■□□□□ 0.85
CNOT1-206ENST00000564557 SCAF11Q99590 1463 aaKnown RBP20.39■□□□□ 0.85
CNOT1-206ENST00000564557 BCANQ96GW7 911 aa20.39■□□□□ 0.85
CNOT1-206ENST00000564557 LTKP29376 864 aa20.38■□□□□ 0.85
CNOT1-206ENST00000564557 SLC4A1APQ9BWU0 796 aaKnown RBP20.38■□□□□ 0.85
CNOT1-206ENST00000564557 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms