RNA–Protein interactions for RNA: ENST00000564529.1

SCAMP2-205, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-205ENST00000564529 INO80Q9ULG1 1556 aaPredicted RBP23.48■■□□□ 1.35
SCAMP2-205ENST00000564529 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
SCAMP2-205ENST00000564529 PLA2R1Q13018 1463 aa23.46■■□□□ 1.35
SCAMP2-205ENST00000564529 MYO3AQ8NEV4 1616 aa23.46■■□□□ 1.35
SCAMP2-205ENST00000564529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.45■■□□□ 1.34
SCAMP2-205ENST00000564529 ZNF142P52746 1687 aaPredicted RBP23.44■■□□□ 1.34
SCAMP2-205ENST00000564529 CEP170BQ9Y4F5 1589 aaPredicted RBP23.44■■□□□ 1.34
SCAMP2-205ENST00000564529 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
SCAMP2-205ENST00000564529 PTPN23Q9H3S7 1636 aa23.42■■□□□ 1.34
SCAMP2-205ENST00000564529 ARHGEF5Q12774 1597 aa23.41■■□□□ 1.34
SCAMP2-205ENST00000564529 PPP6R1Q9UPN7 881 aa23.41■■□□□ 1.34
SCAMP2-205ENST00000564529 RTEL1-TNFRSF6BF6WH68 1400 aa23.37■■□□□ 1.33
SCAMP2-205ENST00000564529 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
SCAMP2-205ENST00000564529 ADGBQ8N7X0 1667 aa23.35■■□□□ 1.33
SCAMP2-205ENST00000564529 ABCC5O15440 1437 aa23.35■■□□□ 1.33
SCAMP2-205ENST00000564529 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
SCAMP2-205ENST00000564529 TSPY4P0CV99 314 aa23.34■■□□□ 1.33
SCAMP2-205ENST00000564529 TSPY10P0CW01 314 aa23.34■■□□□ 1.33
SCAMP2-205ENST00000564529 DHX29Q7Z478 1369 aaKnown RBP23.32■■□□□ 1.32
SCAMP2-205ENST00000564529 FAM50AQ14320 339 aaKnown RBP23.32■■□□□ 1.32
SCAMP2-205ENST00000564529 DNMT1P26358 1616 aaKnown RBP23.32■■□□□ 1.32
SCAMP2-205ENST00000564529 FBXO31Q5XUX0 539 aaPredicted RBP23.31■■□□□ 1.32
SCAMP2-205ENST00000564529 DAPK1P53355 1430 aa23.31■■□□□ 1.32
SCAMP2-205ENST00000564529 TNRQ92752 1358 aa23.28■■□□□ 1.32
SCAMP2-205ENST00000564529 SHANK2Q9UPX8 1470 aa23.28■■□□□ 1.32
SCAMP2-205ENST00000564529 MAST1Q9Y2H9 1570 aa23.27■■□□□ 1.32
SCAMP2-205ENST00000564529 KIF3BO15066 747 aa23.27■■□□□ 1.32
SCAMP2-205ENST00000564529 HSPA1LP34931 641 aa23.25■■□□□ 1.31
SCAMP2-205ENST00000564529 PIP4K2BP78356 416 aa23.25■■□□□ 1.31
SCAMP2-205ENST00000564529 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
SCAMP2-205ENST00000564529 NEURL4Q96JN8 1562 aa23.24■■□□□ 1.31
SCAMP2-205ENST00000564529 PZPP20742 1482 aa23.23■■□□□ 1.31
SCAMP2-205ENST00000564529 TOM1O60784 492 aa23.22■■□□□ 1.31
SCAMP2-205ENST00000564529 CPS1P31327 1500 aa23.22■■□□□ 1.31
SCAMP2-205ENST00000564529 WASHC2CQ9Y4E1 1318 aa23.21■■□□□ 1.31
SCAMP2-205ENST00000564529 KDM5DQ9BY66 1539 aa23.21■■□□□ 1.31
SCAMP2-205ENST00000564529 POLR1AO95602 1720 aaPredicted RBP23.21■■□□□ 1.31
SCAMP2-205ENST00000564529 ADGRL2O95490 1459 aa23.2■■□□□ 1.3
SCAMP2-205ENST00000564529 ANKLE2Q86XL3 938 aa23.2■■□□□ 1.3
SCAMP2-205ENST00000564529 ROCK1Q13464 1354 aa23.18■■□□□ 1.3
SCAMP2-205ENST00000564529 THEMISQ8N1K5 641 aaPredicted RBP23.18■■□□□ 1.3
SCAMP2-205ENST00000564529 CROCC2H7BZ55 1655 aa23.18■■□□□ 1.3
SCAMP2-205ENST00000564529 FAM135AQ9P2D6 1515 aa23.18■■□□□ 1.3
SCAMP2-205ENST00000564529 ANKRD30AQ9BXX3 1397 aa23.17■■□□□ 1.3
SCAMP2-205ENST00000564529 MED1Q15648 1581 aaPredicted RBP23.15■■□□□ 1.3
SCAMP2-205ENST00000564529 CHIC2Q9UKJ5 165 aa23.15■■□□□ 1.3
SCAMP2-205ENST00000564529 VWDEQ8N2E2 1590 aa23.14■■□□□ 1.3
SCAMP2-205ENST00000564529 NLRP1Q9C000 1473 aa23.14■■□□□ 1.29
SCAMP2-205ENST00000564529 NPHP4O75161 1426 aaPredicted RBP23.13■■□□□ 1.29
SCAMP2-205ENST00000564529 UGGT1Q9NYU2 1555 aa23.12■■□□□ 1.29
SCAMP2-205ENST00000564529 MED14O60244 1454 aa23.11■■□□□ 1.29
SCAMP2-205ENST00000564529 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
SCAMP2-205ENST00000564529 KIF15Q9NS87 1388 aa23.11■■□□□ 1.29
SCAMP2-205ENST00000564529 ITGAEP38570 1179 aa23.09■■□□□ 1.29
SCAMP2-205ENST00000564529 DUOX2Q9NRD8 1548 aa23.08■■□□□ 1.29
SCAMP2-205ENST00000564529 DEPDC5O75140 1603 aa23.08■■□□□ 1.29
SCAMP2-205ENST00000564529 ALKQ9UM73 1620 aa23.08■■□□□ 1.29
SCAMP2-205ENST00000564529 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
SCAMP2-205ENST00000564529 IQGAP1P46940 1657 aa23.03■■□□□ 1.28
SCAMP2-205ENST00000564529 ABCC3O15438 1527 aa23.03■■□□□ 1.28
SCAMP2-205ENST00000564529 RNF17Q9BXT8 1623 aaKnown RBP23.01■■□□□ 1.27
SCAMP2-205ENST00000564529 ANKRD50Q9ULJ7 1429 aa23.01■■□□□ 1.27
SCAMP2-205ENST00000564529 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
SCAMP2-205ENST00000564529 LRRC7Q96NW7 1537 aa23.01■■□□□ 1.27
SCAMP2-205ENST00000564529 HFM1A2PYH4 1435 aa23■■□□□ 1.27
SCAMP2-205ENST00000564529 STRCP1A6NGW2 1772 aa23■■□□□ 1.27
SCAMP2-205ENST00000564529 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
SCAMP2-205ENST00000564529 NAIPQ13075 1403 aa22.99■■□□□ 1.27
SCAMP2-205ENST00000564529 ERVK-7P63135 1459 aa22.98■■□□□ 1.27
SCAMP2-205ENST00000564529 EIF2AK4Q9P2K8 1649 aaKnown RBP22.98■■□□□ 1.27
SCAMP2-205ENST00000564529 TRIM26Q12899 539 aaPredicted RBP22.97■■□□□ 1.27
SCAMP2-205ENST00000564529 ZC3H13Q5T200 1668 aaKnown RBP22.96■■□□□ 1.27
SCAMP2-205ENST00000564529 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
SCAMP2-205ENST00000564529 SYNMO15061 1565 aa22.93■■□□□ 1.26
SCAMP2-205ENST00000564529 LTKP29376 864 aa22.91■■□□□ 1.26
SCAMP2-205ENST00000564529 SCAF11Q99590 1463 aaKnown RBP22.91■■□□□ 1.26
SCAMP2-205ENST00000564529 UBR1Q8IWV7 1749 aa22.91■■□□□ 1.26
SCAMP2-205ENST00000564529 CFAP65Q6ZU64 1925 aaKnown RBP22.9■■□□□ 1.26
SCAMP2-205ENST00000564529 CEP152O94986 1710 aa22.89■■□□□ 1.26
SCAMP2-205ENST00000564529 HRCP23327 699 aa22.89■■□□□ 1.25
SCAMP2-205ENST00000564529 TXNDC2Q86VQ3 553 aa22.89■■□□□ 1.25
SCAMP2-205ENST00000564529 ACIN1Q9UKV3 1341 aaKnown RBP22.88■■□□□ 1.25
SCAMP2-205ENST00000564529 ARHGAP23Q9P227 1491 aa22.87■■□□□ 1.25
SCAMP2-205ENST00000564529 SETD5Q9C0A6 1442 aa22.87■■□□□ 1.25
SCAMP2-205ENST00000564529 GCC2Q8IWJ2 1684 aa22.87■■□□□ 1.25
SCAMP2-205ENST00000564529 SLIT1O75093 1534 aa22.85■■□□□ 1.25
SCAMP2-205ENST00000564529 PRDM15P57071 1507 aaPredicted RBP22.85■■□□□ 1.25
SCAMP2-205ENST00000564529 RGS17Q9UGC6 210 aaPredicted RBP22.84■■□□□ 1.25
SCAMP2-205ENST00000564529 ARHGAP31Q2M1Z3 1444 aa22.83■■□□□ 1.25
SCAMP2-205ENST00000564529 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
SCAMP2-205ENST00000564529 KANK1Q14678 1352 aa22.81■■□□□ 1.24
SCAMP2-205ENST00000564529 LMTK2Q8IWU2 1503 aa22.81■■□□□ 1.24
SCAMP2-205ENST00000564529 UNC13BO14795 1591 aa22.8■■□□□ 1.24
SCAMP2-205ENST00000564529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.79■■□□□ 1.24
SCAMP2-205ENST00000564529 XIRP1Q702N8 1843 aaKnown RBP22.79■■□□□ 1.24
SCAMP2-205ENST00000564529 NUP155O75694 1391 aa22.77■■□□□ 1.24
SCAMP2-205ENST00000564529 TMEM2Q9UHN6 1383 aa22.77■■□□□ 1.24
SCAMP2-205ENST00000564529 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
SCAMP2-205ENST00000564529 PIK3C2BO00750 1634 aa22.75■■□□□ 1.23
SCAMP2-205ENST00000564529 FAM135BQ49AJ0 1406 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms