RNA–Protein interactions for RNA: ENST00000564512.1

VAC14-205, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-205ENST00000564512 KDM5DQ9BY66 1539 aa27.65■■■□□ 2.02
VAC14-205ENST00000564512 RAB3GAP2Q9H2M9 1393 aa27.63■■■□□ 2.01
VAC14-205ENST00000564512 ZC3H13Q5T200 1668 aaKnown RBP27.62■■■□□ 2.01
VAC14-205ENST00000564512 VWDEQ8N2E2 1590 aa27.62■■■□□ 2.01
VAC14-205ENST00000564512 IQGAP3Q86VI3 1631 aa27.62■■■□□ 2.01
VAC14-205ENST00000564512 FAM135AQ9P2D6 1515 aa27.62■■■□□ 2.01
VAC14-205ENST00000564512 CEP152O94986 1710 aa27.57■■■□□ 2
VAC14-205ENST00000564512 HRCP23327 699 aa27.56■■■□□ 2
VAC14-205ENST00000564512 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
VAC14-205ENST00000564512 TET3O43151 1660 aa27.52■■■□□ 2
VAC14-205ENST00000564512 LMTK2Q8IWU2 1503 aa27.51■■■□□ 2
VAC14-205ENST00000564512 FER1L4A9Z1Z3 1794 aa27.51■■□□□ 1.99
VAC14-205ENST00000564512 MROH2AA6NES4 1674 aa27.49■■□□□ 1.99
VAC14-205ENST00000564512 ADAMTSL3P82987 1691 aa27.49■■□□□ 1.99
VAC14-205ENST00000564512 KIF3BO15066 747 aa27.49■■□□□ 1.99
VAC14-205ENST00000564512 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
VAC14-205ENST00000564512 ABCC3O15438 1527 aa27.48■■□□□ 1.99
VAC14-205ENST00000564512 PZPP20742 1482 aa27.48■■□□□ 1.99
VAC14-205ENST00000564512 CLTCQ00610 1675 aaKnown RBP27.47■■□□□ 1.99
VAC14-205ENST00000564512 EFCAB6Q5THR3 1501 aa27.44■■□□□ 1.98
VAC14-205ENST00000564512 E9PCH4 1651 aa27.42■■□□□ 1.98
VAC14-205ENST00000564512 MADDQ8WXG6 1647 aa27.41■■□□□ 1.98
VAC14-205ENST00000564512 NUP155O75694 1391 aa27.39■■□□□ 1.98
VAC14-205ENST00000564512 KANK1Q14678 1352 aa27.39■■□□□ 1.98
VAC14-205ENST00000564512 PPP6R1Q9UPN7 881 aa27.38■■□□□ 1.97
VAC14-205ENST00000564512 RIMS1Q86UR5 1692 aaKnown RBP27.36■■□□□ 1.97
VAC14-205ENST00000564512 CNTLNQ9NXG0 1405 aa27.35■■□□□ 1.97
VAC14-205ENST00000564512 ARID4BQ4LE39 1312 aaPredicted RBP27.35■■□□□ 1.97
VAC14-205ENST00000564512 GGT6Q6P531 493 aa27.34■■□□□ 1.97
VAC14-205ENST00000564512 C3P01024 1663 aa27.33■■□□□ 1.97
VAC14-205ENST00000564512 SPHKAPQ2M3C7 1700 aa27.33■■□□□ 1.97
VAC14-205ENST00000564512 ARHGAP31Q2M1Z3 1444 aa27.32■■□□□ 1.96
VAC14-205ENST00000564512 RPRD2Q5VT52 1461 aaKnown RBP27.32■■□□□ 1.96
VAC14-205ENST00000564512 PREX1Q8TCU6 1659 aa27.31■■□□□ 1.96
VAC14-205ENST00000564512 DHX57Q6P158 1386 aaKnown RBP27.31■■□□□ 1.96
VAC14-205ENST00000564512 TRIM52Q96A61 297 aa27.3■■□□□ 1.96
VAC14-205ENST00000564512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.29■■□□□ 1.96
VAC14-205ENST00000564512 MLECQ14165 292 aa27.26■■□□□ 1.95
VAC14-205ENST00000564512 NPATQ14207 1427 aa27.25■■□□□ 1.95
VAC14-205ENST00000564512 WASHC2CQ9Y4E1 1318 aa27.25■■□□□ 1.95
VAC14-205ENST00000564512 MPHOSPH9Q99550 1183 aa27.24■■□□□ 1.95
VAC14-205ENST00000564512 CFAP65Q6ZU64 1925 aaKnown RBP27.24■■□□□ 1.95
VAC14-205ENST00000564512 SPATA31D1Q6ZQQ2 1576 aa27.23■■□□□ 1.95
VAC14-205ENST00000564512 SLC4A1APQ9BWU0 796 aaKnown RBP27.22■■□□□ 1.95
VAC14-205ENST00000564512 TRPM2O94759 1503 aa27.21■■□□□ 1.95
VAC14-205ENST00000564512 SYNMO15061 1565 aa27.19■■□□□ 1.94
VAC14-205ENST00000564512 PIK3C2BO00750 1634 aa27.19■■□□□ 1.94
VAC14-205ENST00000564512 ERVK-7P63135 1459 aa27.18■■□□□ 1.94
VAC14-205ENST00000564512 PTPRTO14522 1441 aa27.17■■□□□ 1.94
VAC14-205ENST00000564512 NOS1P29475 1434 aa27.17■■□□□ 1.94
VAC14-205ENST00000564512 PKD2Q13563 968 aa27.16■■□□□ 1.94
VAC14-205ENST00000564512 ZMYM3Q14202 1370 aa27.15■■□□□ 1.94
VAC14-205ENST00000564512 PLA2R1Q13018 1463 aa27.14■■□□□ 1.94
VAC14-205ENST00000564512 ESF1Q9H501 851 aaKnown RBP27.13■■□□□ 1.93
VAC14-205ENST00000564512 PTPRMP28827 1452 aa27.13■■□□□ 1.93
VAC14-205ENST00000564512 CLTCL1P53675 1640 aa27.12■■□□□ 1.93
VAC14-205ENST00000564512 ANKRD30BQ9BXX2 1392 aa27.1■■□□□ 1.93
VAC14-205ENST00000564512 MYO3AQ8NEV4 1616 aa27.08■■□□□ 1.93
VAC14-205ENST00000564512 KIF1BO60333 1816 aa27.08■■□□□ 1.93
VAC14-205ENST00000564512 CLSPNQ9HAW4 1339 aa27.08■■□□□ 1.93
VAC14-205ENST00000564512 KDM5AP29375 1690 aaKnown RBP27.08■■□□□ 1.92
VAC14-205ENST00000564512 ZNF142P52746 1687 aaPredicted RBP27.06■■□□□ 1.92
VAC14-205ENST00000564512 SETD1BQ9UPS6 1966 aaKnown RBP27.05■■□□□ 1.92
VAC14-205ENST00000564512 NEURL4Q96JN8 1562 aa27.05■■□□□ 1.92
VAC14-205ENST00000564512 UGGT1Q9NYU2 1555 aa27.05■■□□□ 1.92
VAC14-205ENST00000564512 FOXD1Q16676 465 aa27.04■■□□□ 1.92
VAC14-205ENST00000564512 KDM4FA0A1W2PPD8 638 aa27.02■■□□□ 1.92
VAC14-205ENST00000564512 MYO5BQ9ULV0 1848 aa27.02■■□□□ 1.92
VAC14-205ENST00000564512 CCDC144AA2RUR9 1427 aa26.99■■□□□ 1.91
VAC14-205ENST00000564512 ADGRB3O60242 1522 aa26.99■■□□□ 1.91
VAC14-205ENST00000564512 UBR1Q8IWV7 1749 aa26.99■■□□□ 1.91
VAC14-205ENST00000564512 TNRQ92752 1358 aa26.98■■□□□ 1.91
VAC14-205ENST00000564512 NLRP1Q9C000 1473 aa26.98■■□□□ 1.91
VAC14-205ENST00000564512 TMEM131LA2VDJ0 1609 aa26.98■■□□□ 1.91
VAC14-205ENST00000564512 FBXO31Q5XUX0 539 aaPredicted RBP26.97■■□□□ 1.91
VAC14-205ENST00000564512 IFT172Q9UG01 1749 aa26.96■■□□□ 1.91
VAC14-205ENST00000564512 CEBPAP49715 358 aaPredicted RBP26.95■■□□□ 1.9
VAC14-205ENST00000564512 CCER1Q8TC90 406 aaPredicted RBP26.95■■□□□ 1.9
VAC14-205ENST00000564512 CEP170BQ9Y4F5 1589 aaPredicted RBP26.93■■□□□ 1.9
VAC14-205ENST00000564512 SPATA31E1Q6ZUB1 1445 aa26.9■■□□□ 1.9
VAC14-205ENST00000564512 SLC52A1Q9NWF4 448 aa26.9■■□□□ 1.9
VAC14-205ENST00000564512 A2ML1A8K2U0 1454 aa26.88■■□□□ 1.89
VAC14-205ENST00000564512 PPLO60437 1756 aa26.88■■□□□ 1.89
VAC14-205ENST00000564512 IDI1Q13907 227 aa26.83■■□□□ 1.89
VAC14-205ENST00000564512 SIN3AQ96ST3 1273 aa26.81■■□□□ 1.88
VAC14-205ENST00000564512 UHRF1BP1Q6BDS2 1440 aa26.81■■□□□ 1.88
VAC14-205ENST00000564512 NEXMIFQ5QGS0 1516 aa26.8■■□□□ 1.88
VAC14-205ENST00000564512 SLIT1O75093 1534 aa26.77■■□□□ 1.88
VAC14-205ENST00000564512 PLPPR3Q6T4P5 718 aa26.77■■□□□ 1.88
VAC14-205ENST00000564512 ARHGAP23Q9P227 1491 aa26.75■■□□□ 1.87
VAC14-205ENST00000564512 POLR1AO95602 1720 aaPredicted RBP26.75■■□□□ 1.87
VAC14-205ENST00000564512 MYOM2P54296 1465 aa26.74■■□□□ 1.87
VAC14-205ENST00000564512 LMTK3Q96Q04 1460 aa26.74■■□□□ 1.87
VAC14-205ENST00000564512 ZFYVE9O95405 1425 aa26.72■■□□□ 1.87
VAC14-205ENST00000564512 TIMELESSQ9UNS1 1208 aa26.7■■□□□ 1.86
VAC14-205ENST00000564512 TONSLQ96HA7 1378 aa26.7■■□□□ 1.86
VAC14-205ENST00000564512 NEUROD1Q13562 356 aa26.69■■□□□ 1.86
VAC14-205ENST00000564512 NRXN1Q9ULB1 1477 aa26.68■■□□□ 1.86
VAC14-205ENST00000564512 TMEM2Q9UHN6 1383 aa26.66■■□□□ 1.86
VAC14-205ENST00000564512 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms