RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 DNMT1P26358 1616 aaKnown RBP22.17■■□□□ 1.14
KNOP1-202ENST00000564480 NCOA2Q15596 1464 aa22.15■■□□□ 1.14
KNOP1-202ENST00000564480 CAMSAP2Q08AD1 1489 aa22.13■■□□□ 1.13
KNOP1-202ENST00000564480 CCDC141Q6ZP82 1450 aa22.13■■□□□ 1.13
KNOP1-202ENST00000564480 TNRQ92752 1358 aa22.12■■□□□ 1.13
KNOP1-202ENST00000564480 PZPP20742 1482 aa22.09■■□□□ 1.13
KNOP1-202ENST00000564480 NEURL4Q96JN8 1562 aa22.09■■□□□ 1.13
KNOP1-202ENST00000564480 WASHC2CQ9Y4E1 1318 aa22.08■■□□□ 1.13
KNOP1-202ENST00000564480 KDM5DQ9BY66 1539 aa22.08■■□□□ 1.13
KNOP1-202ENST00000564480 RSPH4AQ5TD94 716 aa22.07■■□□□ 1.12
KNOP1-202ENST00000564480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.07■■□□□ 1.12
KNOP1-202ENST00000564480 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
KNOP1-202ENST00000564480 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
KNOP1-202ENST00000564480 HSPA1LP34931 641 aa22.02■■□□□ 1.12
KNOP1-202ENST00000564480 ARHGEF5Q12774 1597 aa22.02■■□□□ 1.12
KNOP1-202ENST00000564480 FAM135AQ9P2D6 1515 aa22.01■■□□□ 1.11
KNOP1-202ENST00000564480 POLR1AO95602 1720 aaPredicted RBP22.01■■□□□ 1.11
KNOP1-202ENST00000564480 TSPY4P0CV99 314 aa22.01■■□□□ 1.11
KNOP1-202ENST00000564480 TSPY10P0CW01 314 aa22.01■■□□□ 1.11
KNOP1-202ENST00000564480 PIP4K2BP78356 416 aa22.01■■□□□ 1.11
KNOP1-202ENST00000564480 ANKLE2Q86XL3 938 aa22.01■■□□□ 1.11
KNOP1-202ENST00000564480 THEMISQ8N1K5 641 aaPredicted RBP22■■□□□ 1.11
KNOP1-202ENST00000564480 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
KNOP1-202ENST00000564480 VWDEQ8N2E2 1590 aa21.99■■□□□ 1.11
KNOP1-202ENST00000564480 LRRC9Q6ZRR7 1453 aa21.98■■□□□ 1.11
KNOP1-202ENST00000564480 NLRP1Q9C000 1473 aa21.98■■□□□ 1.11
KNOP1-202ENST00000564480 CPS1P31327 1500 aa21.98■■□□□ 1.11
KNOP1-202ENST00000564480 LOC105371045A0A1W2PR82 267 aa21.98■■□□□ 1.11
KNOP1-202ENST00000564480 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
KNOP1-202ENST00000564480 UGGT1Q9NYU2 1555 aa21.97■■□□□ 1.11
KNOP1-202ENST00000564480 NPHP4O75161 1426 aaPredicted RBP21.96■■□□□ 1.11
KNOP1-202ENST00000564480 MED14O60244 1454 aa21.96■■□□□ 1.11
KNOP1-202ENST00000564480 ABCC3O15438 1527 aa21.95■■□□□ 1.1
KNOP1-202ENST00000564480 ALKQ9UM73 1620 aa21.95■■□□□ 1.1
KNOP1-202ENST00000564480 TOM1O60784 492 aa21.94■■□□□ 1.1
KNOP1-202ENST00000564480 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
KNOP1-202ENST00000564480 RNF17Q9BXT8 1623 aaKnown RBP21.93■■□□□ 1.1
KNOP1-202ENST00000564480 MAST1Q9Y2H9 1570 aa21.92■■□□□ 1.1
KNOP1-202ENST00000564480 DEPDC5O75140 1603 aa21.91■■□□□ 1.1
KNOP1-202ENST00000564480 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
KNOP1-202ENST00000564480 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
KNOP1-202ENST00000564480 STRCP1A6NGW2 1772 aa21.88■■□□□ 1.09
KNOP1-202ENST00000564480 MED1Q15648 1581 aaPredicted RBP21.87■■□□□ 1.09
KNOP1-202ENST00000564480 IQGAP1P46940 1657 aa21.86■■□□□ 1.09
KNOP1-202ENST00000564480 MYOM3Q5VTT5 1437 aa21.86■■□□□ 1.09
KNOP1-202ENST00000564480 LRRC7Q96NW7 1537 aa21.85■■□□□ 1.09
KNOP1-202ENST00000564480 EIF2AK4Q9P2K8 1649 aaKnown RBP21.84■■□□□ 1.09
KNOP1-202ENST00000564480 ZC3H13Q5T200 1668 aaKnown RBP21.84■■□□□ 1.09
KNOP1-202ENST00000564480 LTKP29376 864 aa21.83■■□□□ 1.09
KNOP1-202ENST00000564480 CEP152O94986 1710 aa21.83■■□□□ 1.08
KNOP1-202ENST00000564480 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
KNOP1-202ENST00000564480 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
KNOP1-202ENST00000564480 CFAP65Q6ZU64 1925 aaKnown RBP21.8■■□□□ 1.08
KNOP1-202ENST00000564480 UBR1Q8IWV7 1749 aa21.8■■□□□ 1.08
KNOP1-202ENST00000564480 DUOX2Q9NRD8 1548 aa21.8■■□□□ 1.08
KNOP1-202ENST00000564480 ABCC5O15440 1437 aa21.8■■□□□ 1.08
KNOP1-202ENST00000564480 RRP7BPQ9NSQ0 103 aa21.79■■□□□ 1.08
KNOP1-202ENST00000564480 KIF15Q9NS87 1388 aa21.77■■□□□ 1.08
KNOP1-202ENST00000564480 TXNDC2Q86VQ3 553 aa21.77■■□□□ 1.08
KNOP1-202ENST00000564480 SCAF11Q99590 1463 aaKnown RBP21.77■■□□□ 1.07
KNOP1-202ENST00000564480 ARHGAP23Q9P227 1491 aa21.77■■□□□ 1.07
KNOP1-202ENST00000564480 ARHGAP31Q2M1Z3 1444 aa21.75■■□□□ 1.07
KNOP1-202ENST00000564480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.74■■□□□ 1.073e-9■■□□□ 13.3
KNOP1-202ENST00000564480 SLIT1O75093 1534 aa21.74■■□□□ 1.07
KNOP1-202ENST00000564480 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
KNOP1-202ENST00000564480 ERBINQ96RT1 1412 aa21.72■■□□□ 1.07
KNOP1-202ENST00000564480 SYNMO15061 1565 aa21.71■■□□□ 1.07
KNOP1-202ENST00000564480 DAPK1P53355 1430 aa21.69■■□□□ 1.06
KNOP1-202ENST00000564480 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
KNOP1-202ENST00000564480 CROCC2H7BZ55 1655 aa21.69■■□□□ 1.06
KNOP1-202ENST00000564480 IDI1Q13907 227 aa21.68■■□□□ 1.06
KNOP1-202ENST00000564480 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
KNOP1-202ENST00000564480 CHIC2Q9UKJ5 165 aa21.68■■□□□ 1.06
KNOP1-202ENST00000564480 TMEM2Q9UHN6 1383 aa21.68■■□□□ 1.06
KNOP1-202ENST00000564480 PIK3C2BO00750 1634 aa21.68■■□□□ 1.06
KNOP1-202ENST00000564480 XIRP1Q702N8 1843 aaKnown RBP21.67■■□□□ 1.06
KNOP1-202ENST00000564480 EID1Q9Y6B2 187 aa21.66■■□□□ 1.06
KNOP1-202ENST00000564480 RGS17Q9UGC6 210 aaPredicted RBP21.65■■□□□ 1.06
KNOP1-202ENST00000564480 FGD6Q6ZV73 1430 aa21.64■■□□□ 1.06
KNOP1-202ENST00000564480 RBM33Q96EV2 1170 aaKnown RBP21.62■■□□□ 1.05
KNOP1-202ENST00000564480 LMTK2Q8IWU2 1503 aa21.61■■□□□ 1.05
KNOP1-202ENST00000564480 SLC26A8Q96RN1 970 aa21.61■■□□□ 1.05
KNOP1-202ENST00000564480 STAG3Q9UJ98 1225 aa21.61■■□□□ 1.05
KNOP1-202ENST00000564480 KANK1Q14678 1352 aa21.61■■□□□ 1.05
KNOP1-202ENST00000564480 TMEM94Q12767 1356 aa21.6■■□□□ 1.05
KNOP1-202ENST00000564480 ANKRD30AQ9BXX3 1397 aa21.6■■□□□ 1.05
KNOP1-202ENST00000564480 EFCAB6Q5THR3 1501 aa21.6■■□□□ 1.05
KNOP1-202ENST00000564480 TET3O43151 1660 aa21.59■■□□□ 1.05
KNOP1-202ENST00000564480 NOS1P29475 1434 aa21.58■■□□□ 1.05
KNOP1-202ENST00000564480 KCNA6P17658 529 aa21.58■■□□□ 1.05
KNOP1-202ENST00000564480 APLP2Q06481 763 aa21.58■■□□□ 1.05
KNOP1-202ENST00000564480 FAM135BQ49AJ0 1406 aa21.56■■□□□ 1.04
KNOP1-202ENST00000564480 KDM5AP29375 1690 aaKnown RBP21.54■■□□□ 1.04
KNOP1-202ENST00000564480 PROSER2Q86WR7 435 aaPredicted RBP21.54■■□□□ 1.04
KNOP1-202ENST00000564480 ADGRL2O95490 1459 aa21.51■■□□□ 1.03
KNOP1-202ENST00000564480 ADGRB3O60242 1522 aa21.5■■□□□ 1.03
KNOP1-202ENST00000564480 SLC52A1Q9NWF4 448 aa21.49■■□□□ 1.03
KNOP1-202ENST00000564480 POTEAQ6S8J7 498 aa21.48■■□□□ 1.03
KNOP1-202ENST00000564480 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
KNOP1-202ENST00000564480 ROBO1Q9Y6N7 1651 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms