RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 SHANK2Q9UPX8 1470 aa39.4■■■■□ 3.9
AC009041.3-201ENST00000564390 RNF17Q9BXT8 1623 aaKnown RBP39.38■■■■□ 3.89
AC009041.3-201ENST00000564390 DAPK1P53355 1430 aa39.38■■■■□ 3.89
AC009041.3-201ENST00000564390 ILDR1Q86SU0 546 aaPredicted RBP39.37■■■■□ 3.89
AC009041.3-201ENST00000564390 EIF2AK4Q9P2K8 1649 aaKnown RBP39.36■■■■□ 3.89
AC009041.3-201ENST00000564390 FAM135AQ9P2D6 1515 aa39.36■■■■□ 3.89
AC009041.3-201ENST00000564390 DUOX2Q9NRD8 1548 aa39.33■■■■□ 3.89
AC009041.3-201ENST00000564390 ZNF142P52746 1687 aaPredicted RBP39.32■■■■□ 3.88
AC009041.3-201ENST00000564390 WASHC2CQ9Y4E1 1318 aa39.3■■■■□ 3.88
AC009041.3-201ENST00000564390 KIF15Q9NS87 1388 aa39.3■■■■□ 3.88
AC009041.3-201ENST00000564390 MROH1Q8NDA8 1641 aa39.29■■■■□ 3.88
AC009041.3-201ENST00000564390 CEP170BQ9Y4F5 1589 aaPredicted RBP39.27■■■■□ 3.88
AC009041.3-201ENST00000564390 PZPP20742 1482 aa39.26■■■■□ 3.88
AC009041.3-201ENST00000564390 CAMSAP1Q5T5Y3 1602 aa39.25■■■■□ 3.87
AC009041.3-201ENST00000564390 RRP7BPQ9NSQ0 103 aa39.24■■■■□ 3.87
AC009041.3-201ENST00000564390 ABCC3O15438 1527 aa39.24■■■■□ 3.87
AC009041.3-201ENST00000564390 NCOA1Q15788 1441 aa39.23■■■■□ 3.87
AC009041.3-201ENST00000564390 ZC3H13Q5T200 1668 aaKnown RBP39.23■■■■□ 3.87
AC009041.3-201ENST00000564390 FBXO31Q5XUX0 539 aaPredicted RBP39.21■■■■□ 3.87
AC009041.3-201ENST00000564390 FAM50AQ14320 339 aaKnown RBP39.2■■■■□ 3.87
AC009041.3-201ENST00000564390 CHIC2Q9UKJ5 165 aa39.2■■■■□ 3.87
AC009041.3-201ENST00000564390 CEP152O94986 1710 aa39.2■■■■□ 3.87
AC009041.3-201ENST00000564390 ERBINQ96RT1 1412 aa39.18■■■■□ 3.86
AC009041.3-201ENST00000564390 TNRQ92752 1358 aa39.17■■■■□ 3.86
AC009041.3-201ENST00000564390 ANKRD30AQ9BXX3 1397 aa39.14■■■■□ 3.86
AC009041.3-201ENST00000564390 DMRT2Q9Y5R5 561 aa39.14■■■■□ 3.86
AC009041.3-201ENST00000564390 A2ML1A8K2U0 1454 aa39.13■■■■□ 3.85
AC009041.3-201ENST00000564390 PRDM15P57071 1507 aaPredicted RBP39.13■■■■□ 3.85
AC009041.3-201ENST00000564390 PPARGC1BQ86YN6 1023 aaKnown RBP39.12■■■■□ 3.85
AC009041.3-201ENST00000564390 PTPRTO14522 1441 aa39.11■■■■□ 3.85
AC009041.3-201ENST00000564390 DEPDC5O75140 1603 aa39.08■■■■□ 3.85
AC009041.3-201ENST00000564390 ADGRL2O95490 1459 aa39.08■■■■□ 3.85
AC009041.3-201ENST00000564390 PLA2R1Q13018 1463 aa39.07■■■■□ 3.85
AC009041.3-201ENST00000564390 NCKAP5LQ9HCH0 1330 aa39.06■■■■□ 3.84
AC009041.3-201ENST00000564390 FBXO41Q8TF61 875 aa39.04■■■■□ 3.84
AC009041.3-201ENST00000564390 SPATA31D1Q6ZQQ2 1576 aa39.03■■■■□ 3.84
AC009041.3-201ENST00000564390 ERVK-7P63135 1459 aa39.01■■■■□ 3.84
AC009041.3-201ENST00000564390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.01■■■■□ 3.84
AC009041.3-201ENST00000564390 NLRP1Q9C000 1473 aa38.98■■■■□ 3.83
AC009041.3-201ENST00000564390 CERKQ8TCT0 537 aa38.98■■■■□ 3.83
AC009041.3-201ENST00000564390 CFAP65Q6ZU64 1925 aaKnown RBP38.93■■■■□ 3.82
AC009041.3-201ENST00000564390 UGGT1Q9NYU2 1555 aa38.92■■■■□ 3.82
AC009041.3-201ENST00000564390 PKD2Q13563 968 aa38.92■■■■□ 3.82
AC009041.3-201ENST00000564390 KANK1Q14678 1352 aa38.92■■■■□ 3.82
AC009041.3-201ENST00000564390 POLR1AO95602 1720 aaPredicted RBP38.92■■■■□ 3.82
AC009041.3-201ENST00000564390 VWDEQ8N2E2 1590 aa38.91■■■■□ 3.82
AC009041.3-201ENST00000564390 ARHGAP31Q2M1Z3 1444 aa38.88■■■■□ 3.81
AC009041.3-201ENST00000564390 ANKRD50Q9ULJ7 1429 aa38.88■■■■□ 3.81
AC009041.3-201ENST00000564390 NEURL4Q96JN8 1562 aa38.87■■■■□ 3.81
AC009041.3-201ENST00000564390 LTBP4Q8N2S1 1624 aa38.86■■■■□ 3.81
AC009041.3-201ENST00000564390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.86■■■■□ 3.81
AC009041.3-201ENST00000564390 LMTK2Q8IWU2 1503 aa38.85■■■■□ 3.81
AC009041.3-201ENST00000564390 ITGAEP38570 1179 aa38.81■■■■□ 3.8
AC009041.3-201ENST00000564390 EFCAB6Q5THR3 1501 aa38.79■■■■□ 3.8
AC009041.3-201ENST00000564390 THEMISQ8N1K5 641 aaPredicted RBP38.79■■■■□ 3.8
AC009041.3-201ENST00000564390 UBR1Q8IWV7 1749 aa38.78■■■■□ 3.8
AC009041.3-201ENST00000564390 ZNF335Q9H4Z2 1342 aaPredicted RBP38.78■■■■□ 3.8
AC009041.3-201ENST00000564390 ROCK1Q13464 1354 aa38.76■■■■□ 3.8
AC009041.3-201ENST00000564390 UNC13BO14795 1591 aa38.73■■■■□ 3.79
AC009041.3-201ENST00000564390 ANKLE2Q86XL3 938 aa38.71■■■■□ 3.79
AC009041.3-201ENST00000564390 PIK3C2BO00750 1634 aa38.71■■■■□ 3.79
AC009041.3-201ENST00000564390 SYNMO15061 1565 aa38.7■■■■□ 3.79
AC009041.3-201ENST00000564390 RRBP1Q9P2E9 1410 aaKnown RBP38.66■■■■□ 3.78
AC009041.3-201ENST00000564390 TET3O43151 1660 aa38.66■■■■□ 3.78
AC009041.3-201ENST00000564390 NPHP4O75161 1426 aaPredicted RBP38.65■■■■□ 3.78
AC009041.3-201ENST00000564390 MED14O60244 1454 aa38.64■■■■□ 3.78
AC009041.3-201ENST00000564390 IQGAP1P46940 1657 aa38.64■■■■□ 3.78
AC009041.3-201ENST00000564390 NOS1P29475 1434 aa38.61■■■■□ 3.77
AC009041.3-201ENST00000564390 GCC2Q8IWJ2 1684 aa38.61■■■■□ 3.77
AC009041.3-201ENST00000564390 IQSEC2Q5JU85 1478 aa38.6■■■■□ 3.77
AC009041.3-201ENST00000564390 RPRD2Q5VT52 1461 aaKnown RBP38.57■■■■□ 3.76
AC009041.3-201ENST00000564390 SLIT1O75093 1534 aa38.57■■■■□ 3.76
AC009041.3-201ENST00000564390 IQGAP3Q86VI3 1631 aa38.56■■■■□ 3.76
AC009041.3-201ENST00000564390 ARHGAP23Q9P227 1491 aa38.56■■■■□ 3.76
AC009041.3-201ENST00000564390 SCAF11Q99590 1463 aaKnown RBP38.55■■■■□ 3.76
AC009041.3-201ENST00000564390 KDM5AP29375 1690 aaKnown RBP38.53■■■■□ 3.76
AC009041.3-201ENST00000564390 IDI1Q13907 227 aa38.53■■■■□ 3.76
AC009041.3-201ENST00000564390 E9PCH4 1651 aa38.52■■■■□ 3.76
AC009041.3-201ENST00000564390 STAG3Q9UJ98 1225 aa38.51■■■■□ 3.76
AC009041.3-201ENST00000564390 ADGRB3O60242 1522 aa38.51■■■■□ 3.76
AC009041.3-201ENST00000564390 LTKP29376 864 aa38.48■■■■□ 3.75
AC009041.3-201ENST00000564390 NUP155O75694 1391 aa38.46■■■■□ 3.75
AC009041.3-201ENST00000564390 TMEM2Q9UHN6 1383 aa38.46■■■■□ 3.75
AC009041.3-201ENST00000564390 TXNDC2Q86VQ3 553 aa38.46■■■■□ 3.75
AC009041.3-201ENST00000564390 CPS1P31327 1500 aa38.46■■■■□ 3.75
AC009041.3-201ENST00000564390 STRCP1A6NGW2 1772 aa38.4■■■■□ 3.74
AC009041.3-201ENST00000564390 SLC52A1Q9NWF4 448 aa38.4■■■■□ 3.74
AC009041.3-201ENST00000564390 EID1Q9Y6B2 187 aa38.4■■■■□ 3.74
AC009041.3-201ENST00000564390 MYO5BQ9ULV0 1848 aa38.38■■■■□ 3.73
AC009041.3-201ENST00000564390 NAIPQ13075 1403 aa38.38■■■■□ 3.73
AC009041.3-201ENST00000564390 UBAP1LF5GYI3 381 aa38.34■■■■□ 3.73
AC009041.3-201ENST00000564390 TMEM131LA2VDJ0 1609 aa38.33■■■■□ 3.73
AC009041.3-201ENST00000564390 HFM1A2PYH4 1435 aa38.26■■■■□ 3.72
AC009041.3-201ENST00000564390 SPHKAPQ2M3C7 1700 aa38.24■■■■□ 3.71
AC009041.3-201ENST00000564390 ZFYVE9O95405 1425 aa38.24■■■■□ 3.71
AC009041.3-201ENST00000564390 LRRC7Q96NW7 1537 aa38.23■■■■□ 3.71
AC009041.3-201ENST00000564390 CHGAP10645 457 aaKnown RBP38.23■■■■□ 3.71
AC009041.3-201ENST00000564390 RIMS2Q9UQ26 1411 aa38.21■■■■□ 3.71
AC009041.3-201ENST00000564390 SENP3Q9H4L4 574 aaPredicted RBP38.2■■■■□ 3.71
AC009041.3-201ENST00000564390 SLC26A8Q96RN1 970 aa38.17■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms