RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 FAM135AQ9P2D6 1515 aa31.1■■■□□ 2.57
SHCBP1-203ENST00000564272 DAPK1P53355 1430 aa31.1■■■□□ 2.57
SHCBP1-203ENST00000564272 MYO3AQ8NEV4 1616 aa31.09■■■□□ 2.57
SHCBP1-203ENST00000564272 RNF17Q9BXT8 1623 aaKnown RBP31.09■■■□□ 2.57
SHCBP1-203ENST00000564272 EIF2AK4Q9P2K8 1649 aaKnown RBP31.09■■■□□ 2.57
SHCBP1-203ENST00000564272 ILDR1Q86SU0 546 aaPredicted RBP31.07■■■□□ 2.56
SHCBP1-203ENST00000564272 DUOX2Q9NRD8 1548 aa31.06■■■□□ 2.56
SHCBP1-203ENST00000564272 ZNF142P52746 1687 aaPredicted RBP31.04■■■□□ 2.56
SHCBP1-203ENST00000564272 KIF15Q9NS87 1388 aa31.04■■■□□ 2.56
SHCBP1-203ENST00000564272 WASHC2CQ9Y4E1 1318 aa31.03■■■□□ 2.56
SHCBP1-203ENST00000564272 MROH1Q8NDA8 1641 aa31.02■■■□□ 2.56
SHCBP1-203ENST00000564272 PZPP20742 1482 aa31.01■■■□□ 2.55
SHCBP1-203ENST00000564272 CEP170BQ9Y4F5 1589 aaPredicted RBP31■■■□□ 2.55
SHCBP1-203ENST00000564272 NCOA1Q15788 1441 aa30.98■■■□□ 2.55
SHCBP1-203ENST00000564272 ABCC3O15438 1527 aa30.98■■■□□ 2.55
SHCBP1-203ENST00000564272 CAMSAP1Q5T5Y3 1602 aa30.98■■■□□ 2.55
SHCBP1-203ENST00000564272 RRP7BPQ9NSQ0 103 aa30.98■■■□□ 2.55
SHCBP1-203ENST00000564272 ZC3H13Q5T200 1668 aaKnown RBP30.97■■■□□ 2.55
SHCBP1-203ENST00000564272 FBXO31Q5XUX0 539 aaPredicted RBP30.97■■■□□ 2.55
SHCBP1-203ENST00000564272 ERBINQ96RT1 1412 aa30.96■■■□□ 2.55
SHCBP1-203ENST00000564272 FAM50AQ14320 339 aaKnown RBP30.95■■■□□ 2.55
SHCBP1-203ENST00000564272 CHIC2Q9UKJ5 165 aa30.95■■■□□ 2.55
SHCBP1-203ENST00000564272 TNRQ92752 1358 aa30.93■■■□□ 2.54
SHCBP1-203ENST00000564272 CEP152O94986 1710 aa30.93■■■□□ 2.54
SHCBP1-203ENST00000564272 DMRT2Q9Y5R5 561 aa30.92■■■□□ 2.54
SHCBP1-203ENST00000564272 ANKRD30AQ9BXX3 1397 aa30.92■■■□□ 2.54
SHCBP1-203ENST00000564272 A2ML1A8K2U0 1454 aa30.91■■■□□ 2.54
SHCBP1-203ENST00000564272 PRDM15P57071 1507 aaPredicted RBP30.9■■■□□ 2.54
SHCBP1-203ENST00000564272 PTPRTO14522 1441 aa30.9■■■□□ 2.54
SHCBP1-203ENST00000564272 ADGRL2O95490 1459 aa30.88■■■□□ 2.53
SHCBP1-203ENST00000564272 PPARGC1BQ86YN6 1023 aaKnown RBP30.87■■■□□ 2.53
SHCBP1-203ENST00000564272 PLA2R1Q13018 1463 aa30.86■■■□□ 2.53
SHCBP1-203ENST00000564272 DEPDC5O75140 1603 aa30.86■■■□□ 2.53
SHCBP1-203ENST00000564272 NCKAP5LQ9HCH0 1330 aa30.84■■■□□ 2.53
SHCBP1-203ENST00000564272 FBXO41Q8TF61 875 aa30.82■■■□□ 2.52
SHCBP1-203ENST00000564272 SPATA31D1Q6ZQQ2 1576 aa30.82■■■□□ 2.52
SHCBP1-203ENST00000564272 ERVK-7P63135 1459 aa30.81■■■□□ 2.52
SHCBP1-203ENST00000564272 NLRP1Q9C000 1473 aa30.79■■■□□ 2.52
SHCBP1-203ENST00000564272 CERKQ8TCT0 537 aa30.79■■■□□ 2.52
SHCBP1-203ENST00000564272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.79■■■□□ 2.52
SHCBP1-203ENST00000564272 CFAP65Q6ZU64 1925 aaKnown RBP30.75■■■□□ 2.51
SHCBP1-203ENST00000564272 PKD2Q13563 968 aa30.75■■■□□ 2.51
SHCBP1-203ENST00000564272 KANK1Q14678 1352 aa30.74■■■□□ 2.51
SHCBP1-203ENST00000564272 VWDEQ8N2E2 1590 aa30.73■■■□□ 2.51
SHCBP1-203ENST00000564272 UGGT1Q9NYU2 1555 aa30.73■■■□□ 2.51
SHCBP1-203ENST00000564272 ARHGAP31Q2M1Z3 1444 aa30.73■■■□□ 2.51
SHCBP1-203ENST00000564272 ANKRD50Q9ULJ7 1429 aa30.72■■■□□ 2.51
SHCBP1-203ENST00000564272 POLR1AO95602 1720 aaPredicted RBP30.71■■■□□ 2.51
SHCBP1-203ENST00000564272 LMTK2Q8IWU2 1503 aa30.69■■■□□ 2.5
SHCBP1-203ENST00000564272 LTBP4Q8N2S1 1624 aa30.69■■■□□ 2.5
SHCBP1-203ENST00000564272 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.68■■■□□ 2.5
SHCBP1-203ENST00000564272 NEURL4Q96JN8 1562 aa30.68■■■□□ 2.5
SHCBP1-203ENST00000564272 THEMISQ8N1K5 641 aaPredicted RBP30.64■■■□□ 2.5
SHCBP1-203ENST00000564272 ITGAEP38570 1179 aa30.63■■■□□ 2.49
SHCBP1-203ENST00000564272 ROCK1Q13464 1354 aa30.63■■■□□ 2.49
SHCBP1-203ENST00000564272 EFCAB6Q5THR3 1501 aa30.63■■■□□ 2.49
SHCBP1-203ENST00000564272 ZNF335Q9H4Z2 1342 aaPredicted RBP30.62■■■□□ 2.49
SHCBP1-203ENST00000564272 UBR1Q8IWV7 1749 aa30.61■■■□□ 2.49
SHCBP1-203ENST00000564272 ANKLE2Q86XL3 938 aa30.58■■■□□ 2.49
SHCBP1-203ENST00000564272 UNC13BO14795 1591 aa30.58■■■□□ 2.49
SHCBP1-203ENST00000564272 RRBP1Q9P2E9 1410 aaKnown RBP30.56■■■□□ 2.48
SHCBP1-203ENST00000564272 PIK3C2BO00750 1634 aa30.55■■■□□ 2.48
SHCBP1-203ENST00000564272 SYNMO15061 1565 aa30.54■■■□□ 2.48
SHCBP1-203ENST00000564272 NPHP4O75161 1426 aaPredicted RBP30.53■■■□□ 2.48
SHCBP1-203ENST00000564272 TET3O43151 1660 aa30.52■■■□□ 2.48
SHCBP1-203ENST00000564272 MED14O60244 1454 aa30.52■■■□□ 2.48
SHCBP1-203ENST00000564272 NOS1P29475 1434 aa30.5■■■□□ 2.47
SHCBP1-203ENST00000564272 IQGAP1P46940 1657 aa30.5■■■□□ 2.47
SHCBP1-203ENST00000564272 IQSEC2Q5JU85 1478 aa30.49■■■□□ 2.47
SHCBP1-203ENST00000564272 GCC2Q8IWJ2 1684 aa30.48■■■□□ 2.47
SHCBP1-203ENST00000564272 RPRD2Q5VT52 1461 aaKnown RBP30.47■■■□□ 2.47
SHCBP1-203ENST00000564272 ARHGAP23Q9P227 1491 aa30.47■■■□□ 2.47
SHCBP1-203ENST00000564272 SLIT1O75093 1534 aa30.47■■■□□ 2.47
SHCBP1-203ENST00000564272 SCAF11Q99590 1463 aaKnown RBP30.44■■■□□ 2.46
SHCBP1-203ENST00000564272 IQGAP3Q86VI3 1631 aa30.44■■■□□ 2.46
SHCBP1-203ENST00000564272 IDI1Q13907 227 aa30.44■■■□□ 2.46
SHCBP1-203ENST00000564272 KDM5AP29375 1690 aaKnown RBP30.42■■■□□ 2.46
SHCBP1-203ENST00000564272 STAG3Q9UJ98 1225 aa30.41■■■□□ 2.46
SHCBP1-203ENST00000564272 ADGRB3O60242 1522 aa30.41■■■□□ 2.46
SHCBP1-203ENST00000564272 E9PCH4 1651 aa30.4■■■□□ 2.46
SHCBP1-203ENST00000564272 LTKP29376 864 aa30.4■■■□□ 2.46
SHCBP1-203ENST00000564272 TMEM2Q9UHN6 1383 aa30.39■■■□□ 2.45
SHCBP1-203ENST00000564272 NUP155O75694 1391 aa30.38■■■□□ 2.45
SHCBP1-203ENST00000564272 CPS1P31327 1500 aa30.37■■■□□ 2.45
SHCBP1-203ENST00000564272 TXNDC2Q86VQ3 553 aa30.37■■■□□ 2.45
SHCBP1-203ENST00000564272 SLC52A1Q9NWF4 448 aa30.34■■■□□ 2.45
SHCBP1-203ENST00000564272 EID1Q9Y6B2 187 aa30.33■■■□□ 2.45
SHCBP1-203ENST00000564272 NAIPQ13075 1403 aa30.31■■■□□ 2.44
SHCBP1-203ENST00000564272 STRCP1A6NGW2 1772 aa30.31■■■□□ 2.44
SHCBP1-203ENST00000564272 MYO5BQ9ULV0 1848 aa30.29■■■□□ 2.44
SHCBP1-203ENST00000564272 TMEM131LA2VDJ0 1609 aa30.26■■■□□ 2.44
SHCBP1-203ENST00000564272 UBAP1LF5GYI3 381 aa30.26■■■□□ 2.43
SHCBP1-203ENST00000564272 HFM1A2PYH4 1435 aa30.23■■■□□ 2.43
SHCBP1-203ENST00000564272 ZFYVE9O95405 1425 aa30.2■■■□□ 2.42
SHCBP1-203ENST00000564272 LRRC7Q96NW7 1537 aa30.19■■■□□ 2.42
SHCBP1-203ENST00000564272 CHGAP10645 457 aaKnown RBP30.18■■■□□ 2.42
SHCBP1-203ENST00000564272 RIMS2Q9UQ26 1411 aa30.18■■■□□ 2.42
SHCBP1-203ENST00000564272 SPHKAPQ2M3C7 1700 aa30.18■■■□□ 2.42
SHCBP1-203ENST00000564272 SLC26A8Q96RN1 970 aa30.14■■■□□ 2.42
SHCBP1-203ENST00000564272 SENP3Q9H4L4 574 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms