RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 MBD5Q9P267 1494 aa30.16■■■□□ 2.42
SLX1A-204ENST00000563995 PPARGC1BQ86YN6 1023 aaKnown RBP30.13■■■□□ 2.41
SLX1A-204ENST00000563995 FGD6Q6ZV73 1430 aa30.12■■■□□ 2.41
SLX1A-204ENST00000563995 TCOF1Q13428 1488 aaKnown RBP30.12■■■□□ 2.41
SLX1A-204ENST00000563995 GGT6Q6P531 493 aa30.09■■■□□ 2.41
SLX1A-204ENST00000563995 NCKAP5LQ9HCH0 1330 aa30.09■■■□□ 2.41
SLX1A-204ENST00000563995 PTPN23Q9H3S7 1636 aa30.08■■■□□ 2.41
SLX1A-204ENST00000563995 RTEL1-TNFRSF6BF6WH68 1400 aa30.08■■■□□ 2.41
SLX1A-204ENST00000563995 HSPA1LP34931 641 aa30.06■■■□□ 2.4
SLX1A-204ENST00000563995 PPP6R1Q9UPN7 881 aa30.06■■■□□ 2.4
SLX1A-204ENST00000563995 DNMT1P26358 1616 aaKnown RBP30.05■■■□□ 2.4
SLX1A-204ENST00000563995 ARHGEF5Q12774 1597 aa30.05■■■□□ 2.4
SLX1A-204ENST00000563995 POLR1AO95602 1720 aaPredicted RBP30.03■■■□□ 2.4
SLX1A-204ENST00000563995 PKD2Q13563 968 aa30.03■■■□□ 2.4
SLX1A-204ENST00000563995 CCDC141Q6ZP82 1450 aa30.03■■■□□ 2.4
SLX1A-204ENST00000563995 A2ML1A8K2U0 1454 aa30.02■■■□□ 2.4
SLX1A-204ENST00000563995 RSPH4AQ5TD94 716 aa30.02■■■□□ 2.4
SLX1A-204ENST00000563995 SCAF1Q9H7N4 1312 aaKnown RBP30.01■■■□□ 2.4
SLX1A-204ENST00000563995 DHX29Q7Z478 1369 aaKnown RBP30.01■■■□□ 2.39
SLX1A-204ENST00000563995 PHF23Q9BUL5 403 aaPredicted RBP29.99■■■□□ 2.39
SLX1A-204ENST00000563995 FAM135AQ9P2D6 1515 aa29.99■■■□□ 2.39
SLX1A-204ENST00000563995 KDM5DQ9BY66 1539 aa29.97■■■□□ 2.39
SLX1A-204ENST00000563995 PIP4K2BP78356 416 aa29.96■■■□□ 2.39
SLX1A-204ENST00000563995 NEURL4Q96JN8 1562 aa29.94■■■□□ 2.38
SLX1A-204ENST00000563995 PZPP20742 1482 aa29.93■■■□□ 2.38
SLX1A-204ENST00000563995 TOM1O60784 492 aa29.89■■■□□ 2.38
SLX1A-204ENST00000563995 TSPY4P0CV99 314 aa29.89■■■□□ 2.38
SLX1A-204ENST00000563995 TSPY10P0CW01 314 aa29.89■■■□□ 2.38
SLX1A-204ENST00000563995 FAM50AQ14320 339 aaKnown RBP29.89■■■□□ 2.38
SLX1A-204ENST00000563995 ABCC5O15440 1437 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 MAST1Q9Y2H9 1570 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 TNRQ92752 1358 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 DAPK1P53355 1430 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 KIF3BO15066 747 aa29.87■■■□□ 2.37
SLX1A-204ENST00000563995 CROCC2H7BZ55 1655 aa29.87■■■□□ 2.37
SLX1A-204ENST00000563995 SHANK2Q9UPX8 1470 aa29.86■■■□□ 2.37
SLX1A-204ENST00000563995 RRBP1Q9P2E9 1410 aaKnown RBP29.85■■■□□ 2.37
SLX1A-204ENST00000563995 FBXO31Q5XUX0 539 aaPredicted RBP29.84■■■□□ 2.37
SLX1A-204ENST00000563995 RNF17Q9BXT8 1623 aaKnown RBP29.83■■■□□ 2.37
SLX1A-204ENST00000563995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.83■■■□□ 2.371e-15■■■□□ 16.1
SLX1A-204ENST00000563995 CPS1P31327 1500 aa29.81■■■□□ 2.36
SLX1A-204ENST00000563995 ZC3H13Q5T200 1668 aaKnown RBP29.8■■■□□ 2.36
SLX1A-204ENST00000563995 DEPDC5O75140 1603 aa29.79■■■□□ 2.36
SLX1A-204ENST00000563995 NLRP1Q9C000 1473 aa29.79■■■□□ 2.36
SLX1A-204ENST00000563995 WASHC2CQ9Y4E1 1318 aa29.77■■■□□ 2.36
SLX1A-204ENST00000563995 VWDEQ8N2E2 1590 aa29.77■■■□□ 2.36
SLX1A-204ENST00000563995 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
SLX1A-204ENST00000563995 EIF2AK4Q9P2K8 1649 aaKnown RBP29.76■■■□□ 2.35
SLX1A-204ENST00000563995 ABCC3O15438 1527 aa29.73■■■□□ 2.35
SLX1A-204ENST00000563995 MED14O60244 1454 aa29.73■■■□□ 2.35
SLX1A-204ENST00000563995 MROH1Q8NDA8 1641 aa29.72■■■□□ 2.35
SLX1A-204ENST00000563995 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
SLX1A-204ENST00000563995 CEP152O94986 1710 aa29.7■■■□□ 2.34
SLX1A-204ENST00000563995 ADGRL2O95490 1459 aa29.69■■■□□ 2.34
SLX1A-204ENST00000563995 CHIC2Q9UKJ5 165 aa29.68■■■□□ 2.34
SLX1A-204ENST00000563995 STRCP1A6NGW2 1772 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 CFAP65Q6ZU64 1925 aaKnown RBP29.67■■■□□ 2.34
SLX1A-204ENST00000563995 ANKRD30AQ9BXX3 1397 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 ANKLE2Q86XL3 938 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 NPHP4O75161 1426 aaPredicted RBP29.67■■■□□ 2.34
SLX1A-204ENST00000563995 ALKQ9UM73 1620 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 THEMISQ8N1K5 641 aaPredicted RBP29.66■■■□□ 2.34
SLX1A-204ENST00000563995 KIF15Q9NS87 1388 aa29.65■■■□□ 2.34
SLX1A-204ENST00000563995 DUOX2Q9NRD8 1548 aa29.65■■■□□ 2.34
SLX1A-204ENST00000563995 ERVK-7P63135 1459 aa29.63■■■□□ 2.33
SLX1A-204ENST00000563995 UBR1Q8IWV7 1749 aa29.62■■■□□ 2.33
SLX1A-204ENST00000563995 ITGAEP38570 1179 aa29.62■■■□□ 2.33
SLX1A-204ENST00000563995 RRP7BPQ9NSQ0 103 aa29.62■■■□□ 2.33
SLX1A-204ENST00000563995 ROCK1Q13464 1354 aa29.59■■■□□ 2.33
SLX1A-204ENST00000563995 SYNMO15061 1565 aa29.58■■■□□ 2.33
SLX1A-204ENST00000563995 SENP3Q9H4L4 574 aaPredicted RBP29.58■■■□□ 2.33
SLX1A-204ENST00000563995 ERBINQ96RT1 1412 aa29.57■■■□□ 2.32
SLX1A-204ENST00000563995 RGS17Q9UGC6 210 aaPredicted RBP29.57■■■□□ 2.32
SLX1A-204ENST00000563995 PRDM15P57071 1507 aaPredicted RBP29.55■■■□□ 2.32
SLX1A-204ENST00000563995 LRRC7Q96NW7 1537 aa29.51■■■□□ 2.32
SLX1A-204ENST00000563995 ANKRD50Q9ULJ7 1429 aa29.47■■■□□ 2.31
SLX1A-204ENST00000563995 SLIT1O75093 1534 aa29.47■■■□□ 2.31
SLX1A-204ENST00000563995 XIRP1Q702N8 1843 aaKnown RBP29.47■■■□□ 2.31
SLX1A-204ENST00000563995 ARHGAP23Q9P227 1491 aa29.47■■■□□ 2.31
SLX1A-204ENST00000563995 ARHGAP31Q2M1Z3 1444 aa29.46■■■□□ 2.31
SLX1A-204ENST00000563995 SCAF11Q99590 1463 aaKnown RBP29.46■■■□□ 2.31
SLX1A-204ENST00000563995 PIK3C2BO00750 1634 aa29.42■■■□□ 2.3
SLX1A-204ENST00000563995 KDM5AP29375 1690 aaKnown RBP29.39■■■□□ 2.3
SLX1A-204ENST00000563995 GCC2Q8IWJ2 1684 aa29.37■■■□□ 2.29
SLX1A-204ENST00000563995 HFM1A2PYH4 1435 aa29.37■■■□□ 2.29
SLX1A-204ENST00000563995 NAIPQ13075 1403 aa29.37■■■□□ 2.29
SLX1A-204ENST00000563995 POTEAQ6S8J7 498 aa29.36■■■□□ 2.29
SLX1A-204ENST00000563995 LTKP29376 864 aa29.35■■■□□ 2.29
SLX1A-204ENST00000563995 LMTK2Q8IWU2 1503 aa29.32■■■□□ 2.28
SLX1A-204ENST00000563995 UNC13BO14795 1591 aa29.31■■■□□ 2.28
SLX1A-204ENST00000563995 KANK1Q14678 1352 aa29.3■■■□□ 2.28
SLX1A-204ENST00000563995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.3■■■□□ 2.28
SLX1A-204ENST00000563995 TXNDC2Q86VQ3 553 aa29.29■■■□□ 2.28
SLX1A-204ENST00000563995 TMEM2Q9UHN6 1383 aa29.27■■■□□ 2.28
SLX1A-204ENST00000563995 EFCAB6Q5THR3 1501 aa29.27■■■□□ 2.28
SLX1A-204ENST00000563995 TET3O43151 1660 aa29.22■■■□□ 2.27
SLX1A-204ENST00000563995 EID1Q9Y6B2 187 aa29.22■■■□□ 2.27
SLX1A-204ENST00000563995 SETD1AO15047 1707 aaKnown RBP29.2■■■□□ 2.26
SLX1A-204ENST00000563995 ADGRB3O60242 1522 aa29.2■■■□□ 2.26
SLX1A-204ENST00000563995 NOS1P29475 1434 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms