RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 ABCC5O15440 1437 aa14.46□□□□□ -0.09
PTPN9-203ENST00000563835 PTPRKQ15262 1439 aa14.46□□□□□ -0.09
PTPN9-203ENST00000563835 KIF3BO15066 747 aa14.45□□□□□ -0.1
PTPN9-203ENST00000563835 TSPY4P0CV99 314 aa14.45□□□□□ -0.1
PTPN9-203ENST00000563835 TSPY10P0CW01 314 aa14.45□□□□□ -0.1
PTPN9-203ENST00000563835 DAPK1P53355 1430 aa14.45□□□□□ -0.1
PTPN9-203ENST00000563835 CEP170BQ9Y4F5 1589 aaPredicted RBP14.45□□□□□ -0.1
PTPN9-203ENST00000563835 ZC3H13Q5T200 1668 aaKnown RBP14.45□□□□□ -0.1
PTPN9-203ENST00000563835 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
PTPN9-203ENST00000563835 DUOX2Q9NRD8 1548 aa14.43□□□□□ -0.1
PTPN9-203ENST00000563835 CAMSAP1Q5T5Y3 1602 aa14.43□□□□□ -0.1
PTPN9-203ENST00000563835 ABCC3O15438 1527 aa14.42□□□□□ -0.1
PTPN9-203ENST00000563835 ILDR1Q86SU0 546 aaPredicted RBP14.42□□□□□ -0.1
PTPN9-203ENST00000563835 PZPP20742 1482 aa14.42□□□□□ -0.1
PTPN9-203ENST00000563835 PRDM15P57071 1507 aaPredicted RBP14.41□□□□□ -0.1
PTPN9-203ENST00000563835 NCOA1Q15788 1441 aa14.41□□□□□ -0.1
PTPN9-203ENST00000563835 KIF15Q9NS87 1388 aa14.4□□□□□ -0.1
PTPN9-203ENST00000563835 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
PTPN9-203ENST00000563835 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
PTPN9-203ENST00000563835 ERBINQ96RT1 1412 aa14.37□□□□□ -0.11
PTPN9-203ENST00000563835 POLR1AO95602 1720 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-203ENST00000563835 FBXO31Q5XUX0 539 aaPredicted RBP14.36□□□□□ -0.11
PTPN9-203ENST00000563835 A2ML1A8K2U0 1454 aa14.36□□□□□ -0.11
PTPN9-203ENST00000563835 WASHC2CQ9Y4E1 1318 aa14.36□□□□□ -0.11
PTPN9-203ENST00000563835 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
PTPN9-203ENST00000563835 RRP7BPQ9NSQ0 103 aa14.35□□□□□ -0.11
PTPN9-203ENST00000563835 CHIC2Q9UKJ5 165 aa14.35□□□□□ -0.11
PTPN9-203ENST00000563835 ADGRL2O95490 1459 aa14.35□□□□□ -0.11
PTPN9-203ENST00000563835 TNRQ92752 1358 aa14.34□□□□□ -0.11
PTPN9-203ENST00000563835 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
PTPN9-203ENST00000563835 FAM50AQ14320 339 aaKnown RBP14.34□□□□□ -0.11
PTPN9-203ENST00000563835 PPARGC1BQ86YN6 1023 aaKnown RBP14.34□□□□□ -0.11
PTPN9-203ENST00000563835 ERVK-7P63135 1459 aa14.33□□□□□ -0.12
PTPN9-203ENST00000563835 PLA2R1Q13018 1463 aa14.33□□□□□ -0.12
PTPN9-203ENST00000563835 PTPRTO14522 1441 aa14.32□□□□□ -0.12
PTPN9-203ENST00000563835 NEURL4Q96JN8 1562 aa14.32□□□□□ -0.12
PTPN9-203ENST00000563835 ANKRD30AQ9BXX3 1397 aa14.32□□□□□ -0.12
PTPN9-203ENST00000563835 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
PTPN9-203ENST00000563835 NCKAP5LQ9HCH0 1330 aa14.3□□□□□ -0.12
PTPN9-203ENST00000563835 LTBP4Q8N2S1 1624 aa14.3□□□□□ -0.12
PTPN9-203ENST00000563835 NLRP1Q9C000 1473 aa14.29□□□□□ -0.12
PTPN9-203ENST00000563835 UGGT1Q9NYU2 1555 aa14.29□□□□□ -0.12
PTPN9-203ENST00000563835 UBR1Q8IWV7 1749 aa14.29□□□□□ -0.12
PTPN9-203ENST00000563835 EFCAB6Q5THR3 1501 aa14.27□□□□□ -0.12
PTPN9-203ENST00000563835 FBXO41Q8TF61 875 aa14.27□□□□□ -0.13
PTPN9-203ENST00000563835 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
PTPN9-203ENST00000563835 UNC13BO14795 1591 aa14.26□□□□□ -0.13
PTPN9-203ENST00000563835 LMTK2Q8IWU2 1503 aa14.26□□□□□ -0.13
PTPN9-203ENST00000563835 CERKQ8TCT0 537 aa14.26□□□□□ -0.13
PTPN9-203ENST00000563835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTPN9-203ENST00000563835 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
PTPN9-203ENST00000563835 SYNMO15061 1565 aa14.25□□□□□ -0.13
PTPN9-203ENST00000563835 ARHGAP31Q2M1Z3 1444 aa14.24□□□□□ -0.13
PTPN9-203ENST00000563835 ANKRD50Q9ULJ7 1429 aa14.24□□□□□ -0.13
PTPN9-203ENST00000563835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPN9-203ENST00000563835 TET3O43151 1660 aa14.23□□□□□ -0.13
PTPN9-203ENST00000563835 IQGAP1P46940 1657 aa14.23□□□□□ -0.13
PTPN9-203ENST00000563835 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
PTPN9-203ENST00000563835 KANK1Q14678 1352 aa14.22□□□□□ -0.13
PTPN9-203ENST00000563835 ZNF335Q9H4Z2 1342 aaPredicted RBP14.22□□□□□ -0.13
PTPN9-203ENST00000563835 PKD2Q13563 968 aa14.22□□□□□ -0.13
PTPN9-203ENST00000563835 ITGAEP38570 1179 aa14.2□□□□□ -0.14
PTPN9-203ENST00000563835 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
PTPN9-203ENST00000563835 E9PCH4 1651 aa14.2□□□□□ -0.14
PTPN9-203ENST00000563835 IQGAP3Q86VI3 1631 aa14.19□□□□□ -0.14
PTPN9-203ENST00000563835 RRBP1Q9P2E9 1410 aaKnown RBP14.19□□□□□ -0.14
PTPN9-203ENST00000563835 MYO5BQ9ULV0 1848 aa14.19□□□□□ -0.14
PTPN9-203ENST00000563835 KDM5AP29375 1690 aaKnown RBP14.18□□□□□ -0.14
PTPN9-203ENST00000563835 STRCP1A6NGW2 1772 aa14.18□□□□□ -0.14
PTPN9-203ENST00000563835 NPHP4O75161 1426 aaPredicted RBP14.17□□□□□ -0.14
PTPN9-203ENST00000563835 MED14O60244 1454 aa14.17□□□□□ -0.14
PTPN9-203ENST00000563835 NOS1P29475 1434 aa14.16□□□□□ -0.14
PTPN9-203ENST00000563835 ADGRB3O60242 1522 aa14.16□□□□□ -0.14
PTPN9-203ENST00000563835 SLIT1O75093 1534 aa14.16□□□□□ -0.14
PTPN9-203ENST00000563835 ARHGAP23Q9P227 1491 aa14.16□□□□□ -0.14
PTPN9-203ENST00000563835 IQSEC2Q5JU85 1478 aa14.15□□□□□ -0.14
PTPN9-203ENST00000563835 SCAF11Q99590 1463 aaKnown RBP14.15□□□□□ -0.14
PTPN9-203ENST00000563835 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
PTPN9-203ENST00000563835 RPRD2Q5VT52 1461 aaKnown RBP14.14□□□□□ -0.15
PTPN9-203ENST00000563835 ANKLE2Q86XL3 938 aa14.13□□□□□ -0.15
PTPN9-203ENST00000563835 TMEM131LA2VDJ0 1609 aa14.11□□□□□ -0.15
PTPN9-203ENST00000563835 CPS1P31327 1500 aa14.1□□□□□ -0.15
PTPN9-203ENST00000563835 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
PTPN9-203ENST00000563835 LTKP29376 864 aa14.09□□□□□ -0.15
PTPN9-203ENST00000563835 IDI1Q13907 227 aa14.09□□□□□ -0.15
PTPN9-203ENST00000563835 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
PTPN9-203ENST00000563835 NUP155O75694 1391 aa14.08□□□□□ -0.16
PTPN9-203ENST00000563835 NAIPQ13075 1403 aa14.07□□□□□ -0.16
PTPN9-203ENST00000563835 XIRP1Q702N8 1843 aaKnown RBP14.07□□□□□ -0.16
PTPN9-203ENST00000563835 ALKQ9UM73 1620 aa14.06□□□□□ -0.16
PTPN9-203ENST00000563835 TXNDC2Q86VQ3 553 aa14.05□□□□□ -0.16
PTPN9-203ENST00000563835 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
PTPN9-203ENST00000563835 ZFYVE9O95405 1425 aa14.04□□□□□ -0.16
PTPN9-203ENST00000563835 LRRC7Q96NW7 1537 aa14.04□□□□□ -0.16
PTPN9-203ENST00000563835 HFM1A2PYH4 1435 aa14.03□□□□□ -0.16
PTPN9-203ENST00000563835 CLTCL1P53675 1640 aa14.03□□□□□ -0.16
PTPN9-203ENST00000563835 SLC52A1Q9NWF4 448 aa14.02□□□□□ -0.17
PTPN9-203ENST00000563835 UBAP1LF5GYI3 381 aa14.01□□□□□ -0.17
PTPN9-203ENST00000563835 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
PTPN9-203ENST00000563835 EID1Q9Y6B2 187 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms