RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 KIF3BO15066 747 aa39.53■■■■□ 3.92
SPG7-208ENST00000563783 EIF2AK4Q9P2K8 1649 aaKnown RBP39.53■■■■□ 3.92
SPG7-208ENST00000563783 RNF17Q9BXT8 1623 aaKnown RBP39.52■■■■□ 3.92
SPG7-208ENST00000563783 CEP170BQ9Y4F5 1589 aaPredicted RBP39.5■■■■□ 3.91
SPG7-208ENST00000563783 SHANK2Q9UPX8 1470 aa39.48■■■■□ 3.91
SPG7-208ENST00000563783 CAMSAP1Q5T5Y3 1602 aa39.47■■■■□ 3.91
SPG7-208ENST00000563783 PTPN23Q9H3S7 1636 aa39.47■■■■□ 3.91
SPG7-208ENST00000563783 CROCC2H7BZ55 1655 aa39.46■■■■□ 3.91
SPG7-208ENST00000563783 PZPP20742 1482 aa39.46■■■■□ 3.91
SPG7-208ENST00000563783 PLA2R1Q13018 1463 aa39.46■■■■□ 3.91
SPG7-208ENST00000563783 ZC3H13Q5T200 1668 aaKnown RBP39.45■■■■□ 3.91
SPG7-208ENST00000563783 CERKQ8TCT0 537 aa39.42■■■■□ 3.9
SPG7-208ENST00000563783 DUOX2Q9NRD8 1548 aa39.4■■■■□ 3.9
SPG7-208ENST00000563783 TCOF1Q13428 1488 aaKnown RBP39.4■■■■□ 3.9
SPG7-208ENST00000563783 A2ML1A8K2U0 1454 aa39.39■■■■□ 3.9
SPG7-208ENST00000563783 FGD6Q6ZV73 1430 aa39.39■■■■□ 3.9
SPG7-208ENST00000563783 WASHC2CQ9Y4E1 1318 aa39.39■■■■□ 3.9
SPG7-208ENST00000563783 DNMT1P26358 1616 aaKnown RBP39.37■■■■□ 3.89
SPG7-208ENST00000563783 ABCC5O15440 1437 aa39.33■■■■□ 3.89
SPG7-208ENST00000563783 PKD2Q13563 968 aa39.32■■■■□ 3.89
SPG7-208ENST00000563783 TNRQ92752 1358 aa39.32■■■■□ 3.88
SPG7-208ENST00000563783 ABCC3O15438 1527 aa39.31■■■■□ 3.88
SPG7-208ENST00000563783 MROH1Q8NDA8 1641 aa39.31■■■■□ 3.88
SPG7-208ENST00000563783 DAPK1P53355 1430 aa39.29■■■■□ 3.88
SPG7-208ENST00000563783 ERBINQ96RT1 1412 aa39.28■■■■□ 3.88
SPG7-208ENST00000563783 NLRP1Q9C000 1473 aa39.26■■■■□ 3.88
SPG7-208ENST00000563783 KIF15Q9NS87 1388 aa39.25■■■■□ 3.87
SPG7-208ENST00000563783 LTBP4Q8N2S1 1624 aa39.24■■■■□ 3.87
SPG7-208ENST00000563783 PRDM15P57071 1507 aaPredicted RBP39.23■■■■□ 3.87
SPG7-208ENST00000563783 IQSEC2Q5JU85 1478 aa39.22■■■■□ 3.87
SPG7-208ENST00000563783 FBXO31Q5XUX0 539 aaPredicted RBP39.21■■■■□ 3.87
SPG7-208ENST00000563783 SPATA31D1Q6ZQQ2 1576 aa39.21■■■■□ 3.87
SPG7-208ENST00000563783 POLR1AO95602 1720 aaPredicted RBP39.19■■■■□ 3.86
SPG7-208ENST00000563783 DEPDC5O75140 1603 aa39.18■■■■□ 3.86
SPG7-208ENST00000563783 CEP152O94986 1710 aa39.17■■■■□ 3.86
SPG7-208ENST00000563783 NCKAP5LQ9HCH0 1330 aa39.15■■■■□ 3.86
SPG7-208ENST00000563783 ANKRD30AQ9BXX3 1397 aa39.14■■■■□ 3.86
SPG7-208ENST00000563783 ERVK-7P63135 1459 aa39.11■■■■□ 3.85
SPG7-208ENST00000563783 ARHGAP31Q2M1Z3 1444 aa39.11■■■■□ 3.85
SPG7-208ENST00000563783 ADGRL2O95490 1459 aa39.11■■■■□ 3.85
SPG7-208ENST00000563783 UGGT1Q9NYU2 1555 aa39.1■■■■□ 3.85
SPG7-208ENST00000563783 RRP7BPQ9NSQ0 103 aa39.08■■■■□ 3.85
SPG7-208ENST00000563783 THEMISQ8N1K5 641 aaPredicted RBP39.07■■■■□ 3.85
SPG7-208ENST00000563783 NEURL4Q96JN8 1562 aa39.06■■■■□ 3.84
SPG7-208ENST00000563783 CFAP65Q6ZU64 1925 aaKnown RBP39.01■■■■□ 3.84
SPG7-208ENST00000563783 VWDEQ8N2E2 1590 aa39■■■■□ 3.83
SPG7-208ENST00000563783 LMTK2Q8IWU2 1503 aa39■■■■□ 3.83
SPG7-208ENST00000563783 KANK1Q14678 1352 aa39■■■■□ 3.83
SPG7-208ENST00000563783 MED14O60244 1454 aa38.98■■■■□ 3.83
SPG7-208ENST00000563783 ANKLE2Q86XL3 938 aa38.97■■■■□ 3.83
SPG7-208ENST00000563783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.95■■■■□ 3.83
SPG7-208ENST00000563783 ZNF335Q9H4Z2 1342 aaPredicted RBP38.95■■■■□ 3.83
SPG7-208ENST00000563783 UBR1Q8IWV7 1749 aa38.94■■■■□ 3.82
SPG7-208ENST00000563783 CHIC2Q9UKJ5 165 aa38.92■■■■□ 3.82
SPG7-208ENST00000563783 FAM50AQ14320 339 aaKnown RBP38.9■■■■□ 3.82
SPG7-208ENST00000563783 KDM5AP29375 1690 aaKnown RBP38.87■■■■□ 3.81
SPG7-208ENST00000563783 IQGAP1P46940 1657 aa38.87■■■■□ 3.81
SPG7-208ENST00000563783 CPS1P31327 1500 aa38.86■■■■□ 3.81
SPG7-208ENST00000563783 NPHP4O75161 1426 aaPredicted RBP38.85■■■■□ 3.81
SPG7-208ENST00000563783 ANKRD50Q9ULJ7 1429 aa38.84■■■■□ 3.81
SPG7-208ENST00000563783 EFCAB6Q5THR3 1501 aa38.84■■■■□ 3.81
SPG7-208ENST00000563783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.83■■■■□ 3.81
SPG7-208ENST00000563783 SLIT1O75093 1534 aa38.81■■■■□ 3.8
SPG7-208ENST00000563783 ARHGAP23Q9P227 1491 aa38.79■■■■□ 3.8
SPG7-208ENST00000563783 ROCK1Q13464 1354 aa38.79■■■■□ 3.8
SPG7-208ENST00000563783 RPRD2Q5VT52 1461 aaKnown RBP38.77■■■■□ 3.8
SPG7-208ENST00000563783 PIK3C2BO00750 1634 aa38.76■■■■□ 3.8
SPG7-208ENST00000563783 SCAF11Q99590 1463 aaKnown RBP38.74■■■■□ 3.79
SPG7-208ENST00000563783 NOS1P29475 1434 aa38.73■■■■□ 3.79
SPG7-208ENST00000563783 UNC13BO14795 1591 aa38.73■■■■□ 3.79
SPG7-208ENST00000563783 TET3O43151 1660 aa38.72■■■■□ 3.79
SPG7-208ENST00000563783 SYNMO15061 1565 aa38.7■■■■□ 3.79
SPG7-208ENST00000563783 GCC2Q8IWJ2 1684 aa38.68■■■■□ 3.78
SPG7-208ENST00000563783 TMEM2Q9UHN6 1383 aa38.62■■■■□ 3.77
SPG7-208ENST00000563783 UBAP1LF5GYI3 381 aa38.61■■■■□ 3.77
SPG7-208ENST00000563783 SLC52A1Q9NWF4 448 aa38.61■■■■□ 3.77
SPG7-208ENST00000563783 ADGRB3O60242 1522 aa38.59■■■■□ 3.77
SPG7-208ENST00000563783 EID1Q9Y6B2 187 aa38.59■■■■□ 3.77
SPG7-208ENST00000563783 IDI1Q13907 227 aa38.58■■■■□ 3.77
SPG7-208ENST00000563783 STRCP1A6NGW2 1772 aa38.57■■■■□ 3.77
SPG7-208ENST00000563783 IQGAP3Q86VI3 1631 aa38.57■■■■□ 3.77
SPG7-208ENST00000563783 LTKP29376 864 aa38.57■■■■□ 3.76
SPG7-208ENST00000563783 TXNDC2Q86VQ3 553 aa38.57■■■■□ 3.76
SPG7-208ENST00000563783 STAG3Q9UJ98 1225 aa38.55■■■■□ 3.76
SPG7-208ENST00000563783 RRBP1Q9P2E9 1410 aaKnown RBP38.5■■■■□ 3.75
SPG7-208ENST00000563783 E9PCH4 1651 aa38.49■■■■□ 3.75
SPG7-208ENST00000563783 TOM1O60784 492 aa38.48■■■■□ 3.75
SPG7-208ENST00000563783 LRRC7Q96NW7 1537 aa38.48■■■■□ 3.75
SPG7-208ENST00000563783 MYO5BQ9ULV0 1848 aa38.41■■■■□ 3.74
SPG7-208ENST00000563783 TMEM131LA2VDJ0 1609 aa38.41■■■■□ 3.74
SPG7-208ENST00000563783 PPARGC1BQ86YN6 1023 aaKnown RBP38.37■■■■□ 3.73
SPG7-208ENST00000563783 ALKQ9UM73 1620 aa38.37■■■■□ 3.73
SPG7-208ENST00000563783 NUP155O75694 1391 aa38.36■■■■□ 3.73
SPG7-208ENST00000563783 ZFYVE9O95405 1425 aa38.36■■■■□ 3.73
SPG7-208ENST00000563783 ITGAEP38570 1179 aa38.34■■■■□ 3.73
SPG7-208ENST00000563783 XIRP1Q702N8 1843 aaKnown RBP38.32■■■■□ 3.72
SPG7-208ENST00000563783 HDGFP51858 240 aaKnown RBP38.31■■■■□ 3.72
SPG7-208ENST00000563783 NWD1Q149M9 1564 aa38.27■■■■□ 3.72
SPG7-208ENST00000563783 DISP3Q9P2K9 1392 aa38.27■■■■□ 3.72
SPG7-208ENST00000563783 PLEKHG1Q9ULL1 1385 aa38.27■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms