RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 HRCP23327 699 aa24.87■■□□□ 1.57
LPCAT4-205ENST00000563748 KIF3BO15066 747 aa24.86■■□□□ 1.57
LPCAT4-205ENST00000563748 KDM5DQ9BY66 1539 aa24.85■■□□□ 1.57
LPCAT4-205ENST00000563748 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
LPCAT4-205ENST00000563748 CEP170BQ9Y4F5 1589 aaPredicted RBP24.85■■□□□ 1.57
LPCAT4-205ENST00000563748 CERKQ8TCT0 537 aa24.83■■□□□ 1.57
LPCAT4-205ENST00000563748 RNF17Q9BXT8 1623 aaKnown RBP24.82■■□□□ 1.56
LPCAT4-205ENST00000563748 EIF2AK4Q9P2K8 1649 aaKnown RBP24.81■■□□□ 1.56
LPCAT4-205ENST00000563748 APLP2Q06481 763 aa24.8■■□□□ 1.56
LPCAT4-205ENST00000563748 CROCC2H7BZ55 1655 aa24.8■■□□□ 1.56
LPCAT4-205ENST00000563748 PTPN23Q9H3S7 1636 aa24.8■■□□□ 1.56
LPCAT4-205ENST00000563748 PZPP20742 1482 aa24.79■■□□□ 1.56
LPCAT4-205ENST00000563748 PLA2R1Q13018 1463 aa24.78■■□□□ 1.56
LPCAT4-205ENST00000563748 A2ML1A8K2U0 1454 aa24.76■■□□□ 1.55
LPCAT4-205ENST00000563748 ZC3H13Q5T200 1668 aaKnown RBP24.75■■□□□ 1.55
LPCAT4-205ENST00000563748 WASHC2CQ9Y4E1 1318 aa24.75■■□□□ 1.55
LPCAT4-205ENST00000563748 SHANK2Q9UPX8 1470 aa24.75■■□□□ 1.55
LPCAT4-205ENST00000563748 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
LPCAT4-205ENST00000563748 DUOX2Q9NRD8 1548 aa24.73■■□□□ 1.55
LPCAT4-205ENST00000563748 MROH1Q8NDA8 1641 aa24.73■■□□□ 1.55
LPCAT4-205ENST00000563748 TNRQ92752 1358 aa24.73■■□□□ 1.55
LPCAT4-205ENST00000563748 TCOF1Q13428 1488 aaKnown RBP24.73■■□□□ 1.55
LPCAT4-205ENST00000563748 FGD6Q6ZV73 1430 aa24.72■■□□□ 1.55
LPCAT4-205ENST00000563748 ABCC5O15440 1437 aa24.72■■□□□ 1.55
LPCAT4-205ENST00000563748 ABCC3O15438 1527 aa24.72■■□□□ 1.55
LPCAT4-205ENST00000563748 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
LPCAT4-205ENST00000563748 FBXO31Q5XUX0 539 aaPredicted RBP24.71■■□□□ 1.55
LPCAT4-205ENST00000563748 NCKAP5LQ9HCH0 1330 aa24.7■■□□□ 1.54
LPCAT4-205ENST00000563748 PKD2Q13563 968 aa24.67■■□□□ 1.54
LPCAT4-205ENST00000563748 DAPK1P53355 1430 aa24.67■■□□□ 1.54
LPCAT4-205ENST00000563748 CEP152O94986 1710 aa24.67■■□□□ 1.54
LPCAT4-205ENST00000563748 KIF15Q9NS87 1388 aa24.66■■□□□ 1.54
LPCAT4-205ENST00000563748 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
LPCAT4-205ENST00000563748 NLRP1Q9C000 1473 aa24.65■■□□□ 1.54
LPCAT4-205ENST00000563748 ERBINQ96RT1 1412 aa24.64■■□□□ 1.54
LPCAT4-205ENST00000563748 PRDM15P57071 1507 aaPredicted RBP24.63■■□□□ 1.53
LPCAT4-205ENST00000563748 SPATA31D1Q6ZQQ2 1576 aa24.63■■□□□ 1.53
LPCAT4-205ENST00000563748 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
LPCAT4-205ENST00000563748 DEPDC5O75140 1603 aa24.61■■□□□ 1.53
LPCAT4-205ENST00000563748 NEURL4Q96JN8 1562 aa24.6■■□□□ 1.53
LPCAT4-205ENST00000563748 ERVK-7P63135 1459 aa24.59■■□□□ 1.53
LPCAT4-205ENST00000563748 RRP7BPQ9NSQ0 103 aa24.59■■□□□ 1.53
LPCAT4-205ENST00000563748 UGGT1Q9NYU2 1555 aa24.58■■□□□ 1.52
LPCAT4-205ENST00000563748 CFAP65Q6ZU64 1925 aaKnown RBP24.56■■□□□ 1.52
LPCAT4-205ENST00000563748 ZNF335Q9H4Z2 1342 aaPredicted RBP24.56■■□□□ 1.52
LPCAT4-205ENST00000563748 ANKRD30AQ9BXX3 1397 aa24.55■■□□□ 1.52
LPCAT4-205ENST00000563748 ARHGAP31Q2M1Z3 1444 aa24.53■■□□□ 1.52
LPCAT4-205ENST00000563748 ADGRL2O95490 1459 aa24.53■■□□□ 1.52
LPCAT4-205ENST00000563748 THEMISQ8N1K5 641 aaPredicted RBP24.53■■□□□ 1.52
LPCAT4-205ENST00000563748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.52■■□□□ 1.52
LPCAT4-205ENST00000563748 CHIC2Q9UKJ5 165 aa24.51■■□□□ 1.51
LPCAT4-205ENST00000563748 VWDEQ8N2E2 1590 aa24.49■■□□□ 1.51
LPCAT4-205ENST00000563748 ANKLE2Q86XL3 938 aa24.49■■□□□ 1.51
LPCAT4-205ENST00000563748 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
LPCAT4-205ENST00000563748 MED14O60244 1454 aa24.49■■□□□ 1.51
LPCAT4-205ENST00000563748 LMTK2Q8IWU2 1503 aa24.48■■□□□ 1.51
LPCAT4-205ENST00000563748 KANK1Q14678 1352 aa24.46■■□□□ 1.51
LPCAT4-205ENST00000563748 FAM50AQ14320 339 aaKnown RBP24.46■■□□□ 1.51
LPCAT4-205ENST00000563748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.45■■□□□ 1.56e-11■□□□□ 9.7
LPCAT4-205ENST00000563748 IQGAP1P46940 1657 aa24.45■■□□□ 1.5
LPCAT4-205ENST00000563748 NPHP4O75161 1426 aaPredicted RBP24.43■■□□□ 1.5
LPCAT4-205ENST00000563748 ZEB1P37275 1124 aaPredicted RBP24.42■■□□□ 1.5
LPCAT4-205ENST00000563748 CPS1P31327 1500 aa24.41■■□□□ 1.5
LPCAT4-205ENST00000563748 EFCAB6Q5THR3 1501 aa24.4■■□□□ 1.5
LPCAT4-205ENST00000563748 PIK3C2BO00750 1634 aa24.39■■□□□ 1.5
LPCAT4-205ENST00000563748 ANKRD50Q9ULJ7 1429 aa24.38■■□□□ 1.49
LPCAT4-205ENST00000563748 SLIT1O75093 1534 aa24.38■■□□□ 1.49
LPCAT4-205ENST00000563748 ARHGAP23Q9P227 1491 aa24.37■■□□□ 1.49
LPCAT4-205ENST00000563748 KDM5AP29375 1690 aaKnown RBP24.37■■□□□ 1.49
LPCAT4-205ENST00000563748 SYNMO15061 1565 aa24.36■■□□□ 1.49
LPCAT4-205ENST00000563748 SCAF11Q99590 1463 aaKnown RBP24.35■■□□□ 1.49
LPCAT4-205ENST00000563748 UBAP1LF5GYI3 381 aa24.33■■□□□ 1.49
LPCAT4-205ENST00000563748 NOS1P29475 1434 aa24.33■■□□□ 1.48
LPCAT4-205ENST00000563748 STRCP1A6NGW2 1772 aa24.32■■□□□ 1.48
LPCAT4-205ENST00000563748 UNC13BO14795 1591 aa24.32■■□□□ 1.48
LPCAT4-205ENST00000563748 TET3O43151 1660 aa24.32■■□□□ 1.48
LPCAT4-205ENST00000563748 ROCK1Q13464 1354 aa24.31■■□□□ 1.48
LPCAT4-205ENST00000563748 RPRD2Q5VT52 1461 aaKnown RBP24.29■■□□□ 1.48
LPCAT4-205ENST00000563748 GCC2Q8IWJ2 1684 aa24.29■■□□□ 1.48
LPCAT4-205ENST00000563748 LTKP29376 864 aa24.28■■□□□ 1.48
LPCAT4-205ENST00000563748 TMEM2Q9UHN6 1383 aa24.27■■□□□ 1.48
LPCAT4-205ENST00000563748 ADGRB3O60242 1522 aa24.27■■□□□ 1.48
LPCAT4-205ENST00000563748 IDI1Q13907 227 aa24.26■■□□□ 1.47
LPCAT4-205ENST00000563748 TXNDC2Q86VQ3 553 aa24.26■■□□□ 1.47
LPCAT4-205ENST00000563748 EID1Q9Y6B2 187 aa24.23■■□□□ 1.47
LPCAT4-205ENST00000563748 IQGAP3Q86VI3 1631 aa24.23■■□□□ 1.47
LPCAT4-205ENST00000563748 PPARGC1BQ86YN6 1023 aaKnown RBP24.22■■□□□ 1.47
LPCAT4-205ENST00000563748 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
LPCAT4-205ENST00000563748 LRRC7Q96NW7 1537 aa24.22■■□□□ 1.47
LPCAT4-205ENST00000563748 SLC52A1Q9NWF4 448 aa24.21■■□□□ 1.47
LPCAT4-205ENST00000563748 E9PCH4 1651 aa24.2■■□□□ 1.47
LPCAT4-205ENST00000563748 ALKQ9UM73 1620 aa24.2■■□□□ 1.46
LPCAT4-205ENST00000563748 MYO5BQ9ULV0 1848 aa24.19■■□□□ 1.46
LPCAT4-205ENST00000563748 TOM1O60784 492 aa24.18■■□□□ 1.46
LPCAT4-205ENST00000563748 DISP3Q9P2K9 1392 aa24.15■■□□□ 1.46
LPCAT4-205ENST00000563748 XIRP1Q702N8 1843 aaKnown RBP24.15■■□□□ 1.46
LPCAT4-205ENST00000563748 TMEM131LA2VDJ0 1609 aa24.15■■□□□ 1.46
LPCAT4-205ENST00000563748 ITGAEP38570 1179 aa24.15■■□□□ 1.46
LPCAT4-205ENST00000563748 RRBP1Q9P2E9 1410 aaKnown RBP24.13■■□□□ 1.45
LPCAT4-205ENST00000563748 PIP4K2BP78356 416 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms