RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 FER1L4A9Z1Z3 1794 aa22.89■■□□□ 1.25
PDXDC1-209ENST00000563667 AGLP35573 1532 aa22.87■■□□□ 1.25
PDXDC1-209ENST00000563667 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
PDXDC1-209ENST00000563667 INO80Q9ULG1 1556 aaPredicted RBP22.86■■□□□ 1.25
PDXDC1-209ENST00000563667 ANKRD50Q9ULJ7 1429 aa22.86■■□□□ 1.25
PDXDC1-209ENST00000563667 TRIM52Q96A61 297 aa22.86■■□□□ 1.25
PDXDC1-209ENST00000563667 A2MP01023 1474 aa22.83■■□□□ 1.25
PDXDC1-209ENST00000563667 CEBPAP49715 358 aaPredicted RBP22.82■■□□□ 1.24
PDXDC1-209ENST00000563667 DUOX2Q9NRD8 1548 aa22.81■■□□□ 1.24
PDXDC1-209ENST00000563667 ACIN1Q9UKV3 1341 aaKnown RBP22.81■■□□□ 1.24
PDXDC1-209ENST00000563667 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
PDXDC1-209ENST00000563667 GGT6Q6P531 493 aa22.76■■□□□ 1.23
PDXDC1-209ENST00000563667 ERBINQ96RT1 1412 aa22.74■■□□□ 1.23
PDXDC1-209ENST00000563667 LMTK3Q96Q04 1460 aa22.74■■□□□ 1.23
PDXDC1-209ENST00000563667 CNTLNQ9NXG0 1405 aa22.74■■□□□ 1.23
PDXDC1-209ENST00000563667 DHX29Q7Z478 1369 aaKnown RBP22.73■■□□□ 1.23
PDXDC1-209ENST00000563667 HSPA2P54652 639 aa22.71■■□□□ 1.23
PDXDC1-209ENST00000563667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.239e-8■■□□□ 12.3
PDXDC1-209ENST00000563667 NUP155O75694 1391 aa22.69■■□□□ 1.22
PDXDC1-209ENST00000563667 KIF3BO15066 747 aa22.69■■□□□ 1.22
PDXDC1-209ENST00000563667 MPHOSPH9Q99550 1183 aa22.69■■□□□ 1.22
PDXDC1-209ENST00000563667 SLC4A1APQ9BWU0 796 aaKnown RBP22.67■■□□□ 1.22
PDXDC1-209ENST00000563667 ZMYM3Q14202 1370 aa22.65■■□□□ 1.22
PDXDC1-209ENST00000563667 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
PDXDC1-209ENST00000563667 UHRF1BP1Q6BDS2 1440 aa22.65■■□□□ 1.22
PDXDC1-209ENST00000563667 C3P01024 1663 aa22.65■■□□□ 1.22
PDXDC1-209ENST00000563667 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
PDXDC1-209ENST00000563667 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
PDXDC1-209ENST00000563667 UNC13BO14795 1591 aa22.63■■□□□ 1.21
PDXDC1-209ENST00000563667 EIF2AK4Q9P2K8 1649 aaKnown RBP22.62■■□□□ 1.21
PDXDC1-209ENST00000563667 CLTCQ00610 1675 aaKnown RBP22.62■■□□□ 1.21
PDXDC1-209ENST00000563667 PREX1Q8TCU6 1659 aa22.62■■□□□ 1.21
PDXDC1-209ENST00000563667 PZPP20742 1482 aa22.61■■□□□ 1.21
PDXDC1-209ENST00000563667 MROH2AA6NES4 1674 aa22.6■■□□□ 1.21
PDXDC1-209ENST00000563667 KDM5DQ9BY66 1539 aa22.6■■□□□ 1.21
PDXDC1-209ENST00000563667 KANK1Q14678 1352 aa22.59■■□□□ 1.21
PDXDC1-209ENST00000563667 PKD2Q13563 968 aa22.58■■□□□ 1.21
PDXDC1-209ENST00000563667 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
PDXDC1-209ENST00000563667 FOXD1Q16676 465 aa22.57■■□□□ 1.2
PDXDC1-209ENST00000563667 NPATQ14207 1427 aa22.57■■□□□ 1.2
PDXDC1-209ENST00000563667 FAM135AQ9P2D6 1515 aa22.56■■□□□ 1.2
PDXDC1-209ENST00000563667 DEPDC5O75140 1603 aa22.53■■□□□ 1.2
PDXDC1-209ENST00000563667 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
PDXDC1-209ENST00000563667 FBXO41Q8TF61 875 aa22.53■■□□□ 1.2
PDXDC1-209ENST00000563667 NEUROD1Q13562 356 aa22.52■■□□□ 1.2
PDXDC1-209ENST00000563667 SIN3AQ96ST3 1273 aa22.51■■□□□ 1.19
PDXDC1-209ENST00000563667 RNF17Q9BXT8 1623 aaKnown RBP22.5■■□□□ 1.19
PDXDC1-209ENST00000563667 PRDM15P57071 1507 aaPredicted RBP22.49■■□□□ 1.19
PDXDC1-209ENST00000563667 MROH1Q8NDA8 1641 aa22.49■■□□□ 1.19
PDXDC1-209ENST00000563667 SETD1BQ9UPS6 1966 aaKnown RBP22.49■■□□□ 1.19
PDXDC1-209ENST00000563667 FBXO31Q5XUX0 539 aaPredicted RBP22.46■■□□□ 1.19
PDXDC1-209ENST00000563667 VWDEQ8N2E2 1590 aa22.46■■□□□ 1.19
PDXDC1-209ENST00000563667 ANKRD30BQ9BXX2 1392 aa22.45■■□□□ 1.18
PDXDC1-209ENST00000563667 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
PDXDC1-209ENST00000563667 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
PDXDC1-209ENST00000563667 TNRQ92752 1358 aa22.42■■□□□ 1.18
PDXDC1-209ENST00000563667 ABCC3O15438 1527 aa22.41■■□□□ 1.18
PDXDC1-209ENST00000563667 TET3O43151 1660 aa22.41■■□□□ 1.18
PDXDC1-209ENST00000563667 CEP152O94986 1710 aa22.4■■□□□ 1.18
PDXDC1-209ENST00000563667 CEP170BQ9Y4F5 1589 aaPredicted RBP22.39■■□□□ 1.18
PDXDC1-209ENST00000563667 LMTK2Q8IWU2 1503 aa22.39■■□□□ 1.17
PDXDC1-209ENST00000563667 ZC3H13Q5T200 1668 aaKnown RBP22.39■■□□□ 1.17
PDXDC1-209ENST00000563667 CAMSAP1Q5T5Y3 1602 aa22.39■■□□□ 1.17
PDXDC1-209ENST00000563667 E9PCH4 1651 aa22.36■■□□□ 1.17
PDXDC1-209ENST00000563667 A2ML1A8K2U0 1454 aa22.36■■□□□ 1.17
PDXDC1-209ENST00000563667 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
PDXDC1-209ENST00000563667 EFCAB6Q5THR3 1501 aa22.35■■□□□ 1.17
PDXDC1-209ENST00000563667 TONSLQ96HA7 1378 aa22.35■■□□□ 1.17
PDXDC1-209ENST00000563667 STRCQ7RTU9 1775 aa22.35■■□□□ 1.17
PDXDC1-209ENST00000563667 NCKAP5LQ9HCH0 1330 aa22.34■■□□□ 1.17
PDXDC1-209ENST00000563667 TIMELESSQ9UNS1 1208 aa22.32■■□□□ 1.16
PDXDC1-209ENST00000563667 PTPRTO14522 1441 aa22.31■■□□□ 1.16
PDXDC1-209ENST00000563667 RPRD2Q5VT52 1461 aaKnown RBP22.31■■□□□ 1.16
PDXDC1-209ENST00000563667 CCDC144AA2RUR9 1427 aa22.31■■□□□ 1.16
PDXDC1-209ENST00000563667 ERVK-7P63135 1459 aa22.3■■□□□ 1.16
PDXDC1-209ENST00000563667 PLA2R1Q13018 1463 aa22.3■■□□□ 1.16
PDXDC1-209ENST00000563667 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
PDXDC1-209ENST00000563667 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
PDXDC1-209ENST00000563667 THEMISQ8N1K5 641 aaPredicted RBP22.27■■□□□ 1.16
PDXDC1-209ENST00000563667 SPHKAPQ2M3C7 1700 aa22.26■■□□□ 1.15
PDXDC1-209ENST00000563667 ARHGAP31Q2M1Z3 1444 aa22.25■■□□□ 1.15
PDXDC1-209ENST00000563667 CERKQ8TCT0 537 aa22.25■■□□□ 1.15
PDXDC1-209ENST00000563667 TRPM2O94759 1503 aa22.25■■□□□ 1.15
PDXDC1-209ENST00000563667 UGGT1Q9NYU2 1555 aa22.25■■□□□ 1.15
PDXDC1-209ENST00000563667 L3MBTL2Q969R5 705 aa22.22■■□□□ 1.15
PDXDC1-209ENST00000563667 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
PDXDC1-209ENST00000563667 CFAP65Q6ZU64 1925 aaKnown RBP22.2■■□□□ 1.14
PDXDC1-209ENST00000563667 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.14
PDXDC1-209ENST00000563667 RGL3Q3MIN7 710 aa22.19■■□□□ 1.14
PDXDC1-209ENST00000563667 CLTCL1P53675 1640 aa22.18■■□□□ 1.14
PDXDC1-209ENST00000563667 NOS1P29475 1434 aa22.18■■□□□ 1.14
PDXDC1-209ENST00000563667 STAG3Q9UJ98 1225 aa22.18■■□□□ 1.14
PDXDC1-209ENST00000563667 CHGAP10645 457 aaKnown RBP22.16■■□□□ 1.14
PDXDC1-209ENST00000563667 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.14
PDXDC1-209ENST00000563667 SYNMO15061 1565 aa22.12■■□□□ 1.13
PDXDC1-209ENST00000563667 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
PDXDC1-209ENST00000563667 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
PDXDC1-209ENST00000563667 POLR1AO95602 1720 aaPredicted RBP22.11■■□□□ 1.13
PDXDC1-209ENST00000563667 SLC52A1Q9NWF4 448 aa22.11■■□□□ 1.13
PDXDC1-209ENST00000563667 NPHP4O75161 1426 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms