RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 GPATCH8Q9UKJ3 1502 aaKnown RBP29.9■■■□□ 2.38
E4F1-203ENST00000563643 NPHP4O75161 1426 aaPredicted RBP29.88■■■□□ 2.37
E4F1-203ENST00000563643 FBXO31Q5XUX0 539 aaPredicted RBP29.87■■■□□ 2.37
E4F1-203ENST00000563643 CASKIN1Q8WXD9 1431 aa29.87■■■□□ 2.37
E4F1-203ENST00000563643 MED14O60244 1454 aa29.87■■■□□ 2.37
E4F1-203ENST00000563643 PLEKHH2Q8IVE3 1493 aa29.87■■■□□ 2.37
E4F1-203ENST00000563643 RNF17Q9BXT8 1623 aaKnown RBP29.85■■■□□ 2.37
E4F1-203ENST00000563643 LRRC7Q96NW7 1537 aa29.84■■■□□ 2.37
E4F1-203ENST00000563643 ADGBQ8N7X0 1667 aa29.84■■■□□ 2.37
E4F1-203ENST00000563643 DEPDC5O75140 1603 aa29.82■■■□□ 2.36
E4F1-203ENST00000563643 THEMISQ8N1K5 641 aaPredicted RBP29.82■■■□□ 2.36
E4F1-203ENST00000563643 PZPP20742 1482 aa29.81■■■□□ 2.36
E4F1-203ENST00000563643 SYNMO15061 1565 aa29.79■■■□□ 2.36
E4F1-203ENST00000563643 CFDP1Q9UEE9 299 aaPredicted RBP29.78■■■□□ 2.36
E4F1-203ENST00000563643 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
E4F1-203ENST00000563643 IQGAP1P46940 1657 aa29.77■■■□□ 2.36
E4F1-203ENST00000563643 STRCP1A6NGW2 1772 aa29.77■■■□□ 2.36
E4F1-203ENST00000563643 FAM135AQ9P2D6 1515 aa29.76■■■□□ 2.36
E4F1-203ENST00000563643 NLRP1Q9C000 1473 aa29.76■■■□□ 2.35
E4F1-203ENST00000563643 KDM5DQ9BY66 1539 aa29.75■■■□□ 2.35
E4F1-203ENST00000563643 POTEAQ6S8J7 498 aa29.74■■■□□ 2.35
E4F1-203ENST00000563643 MIA2Q96PC5 1412 aa29.72■■■□□ 2.35
E4F1-203ENST00000563643 DHX29Q7Z478 1369 aaKnown RBP29.71■■■□□ 2.35
E4F1-203ENST00000563643 FYCO1Q9BQS8 1478 aa29.69■■■□□ 2.34
E4F1-203ENST00000563643 CCNB3Q8WWL7 1395 aa29.69■■■□□ 2.34
E4F1-203ENST00000563643 RTEL1-TNFRSF6BF6WH68 1400 aa29.66■■■□□ 2.34
E4F1-203ENST00000563643 KIF3BO15066 747 aa29.66■■■□□ 2.34
E4F1-203ENST00000563643 WASHC2CQ9Y4E1 1318 aa29.66■■■□□ 2.34
E4F1-203ENST00000563643 MBD5Q9P267 1494 aa29.63■■■□□ 2.33
E4F1-203ENST00000563643 ZNF644Q9H582 1327 aaPredicted RBP29.62■■■□□ 2.33
E4F1-203ENST00000563643 SETD1AO15047 1707 aaKnown RBP29.58■■■□□ 2.33
E4F1-203ENST00000563643 ZC3H13Q5T200 1668 aaKnown RBP29.57■■■□□ 2.32
E4F1-203ENST00000563643 FAM135BQ49AJ0 1406 aa29.56■■■□□ 2.32
E4F1-203ENST00000563643 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.31
E4F1-203ENST00000563643 TIAM1Q13009 1591 aa29.5■■■□□ 2.31
E4F1-203ENST00000563643 XIRP1Q702N8 1843 aaKnown RBP29.5■■■□□ 2.31
E4F1-203ENST00000563643 MTUS2Q5JR59 1369 aa29.49■■■□□ 2.31
E4F1-203ENST00000563643 SCAF11Q99590 1463 aaKnown RBP29.48■■■□□ 2.31
E4F1-203ENST00000563643 CCDC141Q6ZP82 1450 aa29.44■■■□□ 2.3
E4F1-203ENST00000563643 ERVK-7P63135 1459 aa29.43■■■□□ 2.3
E4F1-203ENST00000563643 ROBO1Q9Y6N7 1651 aa29.4■■■□□ 2.3
E4F1-203ENST00000563643 ABCC3O15438 1527 aa29.4■■■□□ 2.3
E4F1-203ENST00000563643 UBR1Q8IWV7 1749 aa29.4■■■□□ 2.3
E4F1-203ENST00000563643 LTKP29376 864 aa29.39■■■□□ 2.3
E4F1-203ENST00000563643 NCOA2Q15596 1464 aa29.38■■■□□ 2.29
E4F1-203ENST00000563643 SRCAPQ6ZRS2 3230 aa29.38■■■□□ 2.29
E4F1-203ENST00000563643 ARHGAP23Q9P227 1491 aa29.37■■■□□ 2.29
E4F1-203ENST00000563643 UPF1Q92900 1129 aaKnown RBP eCLIP29.37■■■□□ 2.29
E4F1-203ENST00000563643 TMEM94Q12767 1356 aa29.37■■■□□ 2.29
E4F1-203ENST00000563643 TXNDC2Q86VQ3 553 aa29.36■■■□□ 2.29
E4F1-203ENST00000563643 SLIT1O75093 1534 aa29.35■■■□□ 2.29
E4F1-203ENST00000563643 EHBP1L1Q8N3D4 1523 aa29.32■■■□□ 2.28
E4F1-203ENST00000563643 CAMSAP2Q08AD1 1489 aa29.32■■■□□ 2.28
E4F1-203ENST00000563643 LRRC9Q6ZRR7 1453 aa29.31■■■□□ 2.28
E4F1-203ENST00000563643 MAP3K1Q13233 1512 aa29.3■■■□□ 2.28
E4F1-203ENST00000563643 RSPH4AQ5TD94 716 aa29.3■■■□□ 2.28
E4F1-203ENST00000563643 CEP162Q5TB80 1403 aa29.29■■■□□ 2.28
E4F1-203ENST00000563643 JCADQ9P266 1359 aa29.28■■■□□ 2.28
E4F1-203ENST00000563643 EID1Q9Y6B2 187 aa29.28■■■□□ 2.28
E4F1-203ENST00000563643 RBM33Q96EV2 1170 aaKnown RBP29.23■■■□□ 2.27
E4F1-203ENST00000563643 PHLPP1O60346 1717 aa29.23■■■□□ 2.27
E4F1-203ENST00000563643 TRIM52Q96A61 297 aa29.22■■■□□ 2.27
E4F1-203ENST00000563643 MROH1Q8NDA8 1641 aa29.22■■■□□ 2.27
E4F1-203ENST00000563643 ARHGEF5Q12774 1597 aa29.22■■■□□ 2.27
E4F1-203ENST00000563643 TSPY4P0CV99 314 aa29.21■■■□□ 2.27
E4F1-203ENST00000563643 TSPY10P0CW01 314 aa29.21■■■□□ 2.27
E4F1-203ENST00000563643 KCNA6P17658 529 aa29.21■■■□□ 2.27
E4F1-203ENST00000563643 PROSER2Q86WR7 435 aaPredicted RBP29.2■■■□□ 2.26
E4F1-203ENST00000563643 TMEM2Q9UHN6 1383 aa29.19■■■□□ 2.26
E4F1-203ENST00000563643 PRDM15P57071 1507 aaPredicted RBP29.19■■■□□ 2.26
E4F1-203ENST00000563643 ZNF772Q68DY9 489 aaPredicted RBP29.18■■■□□ 2.26
E4F1-203ENST00000563643 LRP6O75581 1613 aa29.18■■■□□ 2.26
E4F1-203ENST00000563643 EIF2AK4Q9P2K8 1649 aaKnown RBP29.18■■■□□ 2.26
E4F1-203ENST00000563643 CEP152O94986 1710 aa29.17■■■□□ 2.26
E4F1-203ENST00000563643 SLAIN2Q9P270 581 aa29.15■■■□□ 2.26
E4F1-203ENST00000563643 MSH6P52701 1360 aa29.14■■■□□ 2.26
E4F1-203ENST00000563643 NKTRP30414 1462 aaKnown RBP29.14■■■□□ 2.26
E4F1-203ENST00000563643 CFAP65Q6ZU64 1925 aaKnown RBP29.14■■■□□ 2.25
E4F1-203ENST00000563643 COL16A1Q07092 1604 aaPredicted RBP29.13■■■□□ 2.25
E4F1-203ENST00000563643 MEX3CQ5U5Q3 659 aaKnown RBP29.13■■■□□ 2.25
E4F1-203ENST00000563643 SLC26A8Q96RN1 970 aa29.12■■■□□ 2.25
E4F1-203ENST00000563643 SPATA31A6Q5VVP1 1343 aa29.12■■■□□ 2.25
E4F1-203ENST00000563643 PIK3C2BO00750 1634 aa29.12■■■□□ 2.25
E4F1-203ENST00000563643 ARHGAP31Q2M1Z3 1444 aa29.11■■■□□ 2.25
E4F1-203ENST00000563643 NWD1Q149M9 1564 aa29.1■■■□□ 2.25
E4F1-203ENST00000563643 MAST1Q9Y2H9 1570 aa29.09■■■□□ 2.25
E4F1-203ENST00000563643 TET3O43151 1660 aa29.09■■■□□ 2.25
E4F1-203ENST00000563643 FGD6Q6ZV73 1430 aa29.08■■■□□ 2.25
E4F1-203ENST00000563643 STAG3Q9UJ98 1225 aa29.07■■■□□ 2.24
E4F1-203ENST00000563643 EFCAB6Q5THR3 1501 aa29.06■■■□□ 2.24
E4F1-203ENST00000563643 RXRBP28702 533 aa29.06■■■□□ 2.24
E4F1-203ENST00000563643 CDK12Q9NYV4 1490 aaPredicted RBP29.04■■■□□ 2.24
E4F1-203ENST00000563643 KDM5AP29375 1690 aaKnown RBP29.01■■■□□ 2.23
E4F1-203ENST00000563643 DUOX2Q9NRD8 1548 aa28.97■■■□□ 2.23
E4F1-203ENST00000563643 SHPRHQ149N8 1683 aa28.96■■■□□ 2.23
E4F1-203ENST00000563643 IDI1Q13907 227 aa28.95■■■□□ 2.22
E4F1-203ENST00000563643 AHDC1Q5TGY3 1603 aaPredicted RBP28.94■■■□□ 2.22
E4F1-203ENST00000563643 BCANQ96GW7 911 aa28.91■■■□□ 2.22
E4F1-203ENST00000563643 ADGRB3O60242 1522 aa28.88■■■□□ 2.21
E4F1-203ENST00000563643 RGS12O14924 1447 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms