RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 PTPRKQ15262 1439 aa23.08■■□□□ 1.28
RPUSD1-204ENST00000563560 STRCQ7RTU9 1775 aa23.07■■□□□ 1.28
RPUSD1-204ENST00000563560 ZNF142P52746 1687 aaPredicted RBP23.06■■□□□ 1.28
RPUSD1-204ENST00000563560 ZC3H13Q5T200 1668 aaKnown RBP23.06■■□□□ 1.28
RPUSD1-204ENST00000563560 GGT6Q6P531 493 aa23.06■■□□□ 1.28
RPUSD1-204ENST00000563560 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
RPUSD1-204ENST00000563560 KIF3BO15066 747 aa23.05■■□□□ 1.28
RPUSD1-204ENST00000563560 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
RPUSD1-204ENST00000563560 PRDM15P57071 1507 aaPredicted RBP23.03■■□□□ 1.28
RPUSD1-204ENST00000563560 NCOA1Q15788 1441 aa23.03■■□□□ 1.28
RPUSD1-204ENST00000563560 ERBINQ96RT1 1412 aa23.03■■□□□ 1.28
RPUSD1-204ENST00000563560 ABCC3O15438 1527 aa23.03■■□□□ 1.28
RPUSD1-204ENST00000563560 KIF15Q9NS87 1388 aa23.02■■□□□ 1.28
RPUSD1-204ENST00000563560 CEP152O94986 1710 aa23.02■■□□□ 1.28
RPUSD1-204ENST00000563560 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
RPUSD1-204ENST00000563560 HSPA2P54652 639 aa23.02■■□□□ 1.28
RPUSD1-204ENST00000563560 PZPP20742 1482 aa23■■□□□ 1.27
RPUSD1-204ENST00000563560 ESF1Q9H501 851 aaKnown RBP22.99■■□□□ 1.27
RPUSD1-204ENST00000563560 VWDEQ8N2E2 1590 aa22.98■■□□□ 1.27
RPUSD1-204ENST00000563560 CAMSAP1Q5T5Y3 1602 aa22.97■■□□□ 1.27
RPUSD1-204ENST00000563560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.97■■□□□ 1.27
RPUSD1-204ENST00000563560 CEP170BQ9Y4F5 1589 aaPredicted RBP22.95■■□□□ 1.26
RPUSD1-204ENST00000563560 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
RPUSD1-204ENST00000563560 RRP7BPQ9NSQ0 103 aa22.94■■□□□ 1.26
RPUSD1-204ENST00000563560 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
RPUSD1-204ENST00000563560 RRBP1Q9P2E9 1410 aaKnown RBP22.92■■□□□ 1.26
RPUSD1-204ENST00000563560 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
RPUSD1-204ENST00000563560 CHIC2Q9UKJ5 165 aa22.91■■□□□ 1.26
RPUSD1-204ENST00000563560 WASHC2CQ9Y4E1 1318 aa22.9■■□□□ 1.26
RPUSD1-204ENST00000563560 FAM50AQ14320 339 aaKnown RBP22.9■■□□□ 1.26
RPUSD1-204ENST00000563560 LMTK2Q8IWU2 1503 aa22.9■■□□□ 1.26
RPUSD1-204ENST00000563560 FBXO31Q5XUX0 539 aaPredicted RBP22.88■■□□□ 1.25
RPUSD1-204ENST00000563560 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
RPUSD1-204ENST00000563560 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
RPUSD1-204ENST00000563560 ARHGAP31Q2M1Z3 1444 aa22.87■■□□□ 1.25
RPUSD1-204ENST00000563560 UNC13BO14795 1591 aa22.86■■□□□ 1.25
RPUSD1-204ENST00000563560 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
RPUSD1-204ENST00000563560 ERVK-7P63135 1459 aa22.85■■□□□ 1.25
RPUSD1-204ENST00000563560 TNRQ92752 1358 aa22.84■■□□□ 1.25
RPUSD1-204ENST00000563560 PLA2R1Q13018 1463 aa22.84■■□□□ 1.25
RPUSD1-204ENST00000563560 ANKRD50Q9ULJ7 1429 aa22.83■■□□□ 1.25
RPUSD1-204ENST00000563560 EFCAB6Q5THR3 1501 aa22.81■■□□□ 1.24
RPUSD1-204ENST00000563560 PTPRTO14522 1441 aa22.81■■□□□ 1.24
RPUSD1-204ENST00000563560 NLRP1Q9C000 1473 aa22.8■■□□□ 1.24
RPUSD1-204ENST00000563560 POLR1AO95602 1720 aaPredicted RBP22.78■■□□□ 1.24
RPUSD1-204ENST00000563560 UBR1Q8IWV7 1749 aa22.78■■□□□ 1.24
RPUSD1-204ENST00000563560 NEURL4Q96JN8 1562 aa22.77■■□□□ 1.24
RPUSD1-204ENST00000563560 TET3O43151 1660 aa22.76■■□□□ 1.23
RPUSD1-204ENST00000563560 GCC2Q8IWJ2 1684 aa22.76■■□□□ 1.23
RPUSD1-204ENST00000563560 SYNMO15061 1565 aa22.76■■□□□ 1.23
RPUSD1-204ENST00000563560 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
RPUSD1-204ENST00000563560 UGGT1Q9NYU2 1555 aa22.73■■□□□ 1.23
RPUSD1-204ENST00000563560 NOS1P29475 1434 aa22.73■■□□□ 1.23
RPUSD1-204ENST00000563560 KDM5AP29375 1690 aaKnown RBP22.71■■□□□ 1.23
RPUSD1-204ENST00000563560 KANK1Q14678 1352 aa22.71■■□□□ 1.23
RPUSD1-204ENST00000563560 PIK3C2BO00750 1634 aa22.71■■□□□ 1.23
RPUSD1-204ENST00000563560 LTBP4Q8N2S1 1624 aa22.71■■□□□ 1.23
RPUSD1-204ENST00000563560 E9PCH4 1651 aa22.71■■□□□ 1.23
RPUSD1-204ENST00000563560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.7■■□□□ 1.22
RPUSD1-204ENST00000563560 RPRD2Q5VT52 1461 aaKnown RBP22.68■■□□□ 1.22
RPUSD1-204ENST00000563560 DMRT2Q9Y5R5 561 aa22.68■■□□□ 1.22
RPUSD1-204ENST00000563560 NCKAP5LQ9HCH0 1330 aa22.67■■□□□ 1.22
RPUSD1-204ENST00000563560 NAIPQ13075 1403 aa22.66■■□□□ 1.22
RPUSD1-204ENST00000563560 PKD2Q13563 968 aa22.66■■□□□ 1.22
RPUSD1-204ENST00000563560 MED14O60244 1454 aa22.66■■□□□ 1.22
RPUSD1-204ENST00000563560 ARHGAP23Q9P227 1491 aa22.66■■□□□ 1.22
RPUSD1-204ENST00000563560 SLIT1O75093 1534 aa22.64■■□□□ 1.21
RPUSD1-204ENST00000563560 ITGAEP38570 1179 aa22.64■■□□□ 1.21
RPUSD1-204ENST00000563560 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
RPUSD1-204ENST00000563560 HFM1A2PYH4 1435 aa22.6■■□□□ 1.21
RPUSD1-204ENST00000563560 ILDR1Q86SU0 546 aaPredicted RBP22.6■■□□□ 1.21
RPUSD1-204ENST00000563560 IQGAP1P46940 1657 aa22.59■■□□□ 1.21
RPUSD1-204ENST00000563560 THEMISQ8N1K5 641 aaPredicted RBP22.59■■□□□ 1.21
RPUSD1-204ENST00000563560 ADGRB3O60242 1522 aa22.58■■□□□ 1.21
RPUSD1-204ENST00000563560 TMEM131LA2VDJ0 1609 aa22.56■■□□□ 1.2
RPUSD1-204ENST00000563560 IDI1Q13907 227 aa22.55■■□□□ 1.2
RPUSD1-204ENST00000563560 CERKQ8TCT0 537 aa22.55■■□□□ 1.2
RPUSD1-204ENST00000563560 NUP155O75694 1391 aa22.54■■□□□ 1.2
RPUSD1-204ENST00000563560 STRCP1A6NGW2 1772 aa22.54■■□□□ 1.2
RPUSD1-204ENST00000563560 NPHP4O75161 1426 aaPredicted RBP22.53■■□□□ 1.2
RPUSD1-204ENST00000563560 SPHKAPQ2M3C7 1700 aa22.53■■□□□ 1.2
RPUSD1-204ENST00000563560 FBXO41Q8TF61 875 aa22.52■■□□□ 1.2
RPUSD1-204ENST00000563560 ANKLE2Q86XL3 938 aa22.51■■□□□ 1.19
RPUSD1-204ENST00000563560 IQSEC2Q5JU85 1478 aa22.51■■□□□ 1.19
RPUSD1-204ENST00000563560 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
RPUSD1-204ENST00000563560 ZNF335Q9H4Z2 1342 aaPredicted RBP22.51■■□□□ 1.19
RPUSD1-204ENST00000563560 TMEM2Q9UHN6 1383 aa22.5■■□□□ 1.19
RPUSD1-204ENST00000563560 LTKP29376 864 aa22.49■■□□□ 1.19
RPUSD1-204ENST00000563560 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
RPUSD1-204ENST00000563560 ZFYVE9O95405 1425 aa22.47■■□□□ 1.19
RPUSD1-204ENST00000563560 TRPM2O94759 1503 aa22.42■■□□□ 1.18
RPUSD1-204ENST00000563560 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
RPUSD1-204ENST00000563560 CPS1P31327 1500 aa22.41■■□□□ 1.18
RPUSD1-204ENST00000563560 TXNDC2Q86VQ3 553 aa22.39■■□□□ 1.17
RPUSD1-204ENST00000563560 XIRP1Q702N8 1843 aaKnown RBP22.38■■□□□ 1.17
RPUSD1-204ENST00000563560 ALKQ9UM73 1620 aa22.36■■□□□ 1.17
RPUSD1-204ENST00000563560 RIMS2Q9UQ26 1411 aa22.34■■□□□ 1.17
RPUSD1-204ENST00000563560 NWD1Q149M9 1564 aa22.33■■□□□ 1.16
RPUSD1-204ENST00000563560 LRRC7Q96NW7 1537 aa22.32■■□□□ 1.16
RPUSD1-204ENST00000563560 KIF1BO60333 1816 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms