RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ZHX1Q9UKY1 873 aaPredicted RBP7.7□□□□□ -1.18
CLK3-212ENST00000563418 RAB3GAP2Q9H2M9 1393 aa7.7□□□□□ -1.18
CLK3-212ENST00000563418 PES1O00541 588 aaKnown RBP7.7□□□□□ -1.18
CLK3-212ENST00000563418 PPP1R15AO75807 674 aaPredicted RBP7.7□□□□□ -1.18
CLK3-212ENST00000563418 FAM107BQ9H098 131 aa7.7□□□□□ -1.18
CLK3-212ENST00000563418 BAZ1AQ9NRL2 1556 aaPredicted RBP7.7□□□□□ -1.18
CLK3-212ENST00000563418 MBD3O95983 291 aa7.7□□□□□ -1.18
CLK3-212ENST00000563418 HSP90B2PQ58FF3 399 aa7.7□□□□□ -1.18
CLK3-212ENST00000563418 HS1BP3Q53T59 392 aa7.69□□□□□ -1.18
CLK3-212ENST00000563418 KCNH8Q96L42 1107 aa7.69□□□□□ -1.18
CLK3-212ENST00000563418 BAZ1BQ9UIG0 1483 aaKnown RBP7.69□□□□□ -1.18
CLK3-212ENST00000563418 SLC4A3P48751 1232 aa7.69□□□□□ -1.18
CLK3-212ENST00000563418 FHAD1B1AJZ9 1412 aa7.69□□□□□ -1.18
CLK3-212ENST00000563418 CIZ1Q9ULV3 898 aaPredicted RBP7.69□□□□□ -1.18
CLK3-212ENST00000563418 RBM28Q9NW13 759 aaKnown RBP7.69□□□□□ -1.18
CLK3-212ENST00000563418 KIF15Q9NS87 1388 aa7.69□□□□□ -1.18
CLK3-212ENST00000563418 HAP1P54257 671 aaPredicted RBP7.68□□□□□ -1.18
CLK3-212ENST00000563418 MTUS2Q5JR59 1369 aa7.68□□□□□ -1.18
CLK3-212ENST00000563418 CFAP53Q96M91 514 aa7.68□□□□□ -1.18
CLK3-212ENST00000563418 MFAP1P55081 439 aaKnown RBP7.68□□□□□ -1.18
CLK3-212ENST00000563418 CCP110O43303 1012 aa7.68□□□□□ -1.18
CLK3-212ENST00000563418 CNTLNQ9NXG0 1405 aa7.68□□□□□ -1.18
CLK3-212ENST00000563418 HSPA5P11021 654 aaKnown RBP7.68□□□□□ -1.18
CLK3-212ENST00000563418 BCCIPQ9P287 314 aaKnown RBP eCLIP7.68□□□□□ -1.18
CLK3-212ENST00000563418 PAXIP1Q6ZW49 1069 aaPredicted RBP7.67□□□□□ -1.18
CLK3-212ENST00000563418 BCL11BQ9C0K0 894 aaPredicted RBP7.67□□□□□ -1.18
CLK3-212ENST00000563418 UTP14CQ5TAP6 766 aaKnown RBP7.67□□□□□ -1.18
CLK3-212ENST00000563418 ERCC4Q92889 916 aaPredicted RBP7.67□□□□□ -1.18
CLK3-212ENST00000563418 FAM184AQ8NB25 1140 aa7.67□□□□□ -1.18
CLK3-212ENST00000563418 PRKRIP1Q9H875 184 aaPredicted RBP7.67□□□□□ -1.18
CLK3-212ENST00000563418 CCDC70Q6NSX1 233 aa7.67□□□□□ -1.18
CLK3-212ENST00000563418 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
CLK3-212ENST00000563418 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
CLK3-212ENST00000563418 CREBRFQ8IUR6 639 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 SIN3AQ96ST3 1273 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 NINLQ9Y2I6 1382 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 AEBP1Q8IUX7 1158 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 NLRP13Q86W25 1043 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 IPO8O15397 1037 aaKnown RBP7.66□□□□□ -1.18
CLK3-212ENST00000563418 PPP4R3BQ5MIZ7 849 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 MYBBP1AQ9BQG0 1328 aaKnown RBP7.66□□□□□ -1.18
CLK3-212ENST00000563418 ZBTB7CA1YPR0 619 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 GTF2A1P52655 376 aaPredicted RBP7.66□□□□□ -1.18
CLK3-212ENST00000563418 ANKRD30AQ9BXX3 1397 aa7.66□□□□□ -1.18
CLK3-212ENST00000563418 SCRIBQ14160 1630 aa7.65□□□□□ -1.18
CLK3-212ENST00000563418 ARHGAP35Q9NRY4 1499 aa7.65□□□□□ -1.18
CLK3-212ENST00000563418 GIMAP7Q8NHV1 300 aa7.65□□□□□ -1.18
CLK3-212ENST00000563418 EXOC6Q8TAG9 804 aa7.65□□□□□ -1.18
CLK3-212ENST00000563418 NOC3LQ8WTT2 800 aaKnown RBP7.65□□□□□ -1.18
CLK3-212ENST00000563418 H0YHG0 523 aa7.65□□□□□ -1.18
CLK3-212ENST00000563418 TPM1P09493 284 aa7.65□□□□□ -1.19
CLK3-212ENST00000563418 MCM4P33991 863 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 DDX11Q96FC9 970 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 KIF2AO00139 706 aaPredicted RBP7.64□□□□□ -1.19
CLK3-212ENST00000563418 KCNJ4P48050 445 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 IFT57Q9NWB7 429 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 CDR1P51861 262 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 CCDC112Q8NEF3 446 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 ZNF622Q969S3 477 aaKnown RBP eCLIP7.64□□□□□ -1.192e-8■■□□□ 11.4
CLK3-212ENST00000563418 PRDM10Q9NQV6 1147 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 GOLGA6L19H0YKK7 550 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 FEZ1Q99689 392 aa7.64□□□□□ -1.19
CLK3-212ENST00000563418 TXLNBQ8N3L3 684 aa7.63□□□□□ -1.19
CLK3-212ENST00000563418 GOLGA2Q08379 1002 aa7.63□□□□□ -1.19
CLK3-212ENST00000563418 CARD11Q9BXL7 1154 aa7.63□□□□□ -1.19
CLK3-212ENST00000563418 CCDC191Q8NCU4 936 aa7.63□□□□□ -1.19
CLK3-212ENST00000563418 FAM193AP78312 1265 aa7.63□□□□□ -1.19
CLK3-212ENST00000563418 OFD1O75665 1012 aa7.63□□□□□ -1.19
CLK3-212ENST00000563418 EIF3JO75822 258 aaKnown RBP7.62□□□□□ -1.19
CLK3-212ENST00000563418 CBX1P83916 185 aa7.62□□□□□ -1.19
CLK3-212ENST00000563418 TSPY26PQ9H489 355 aa7.62□□□□□ -1.19
CLK3-212ENST00000563418 CCDC9Q9Y3X0 531 aaKnown RBP7.62□□□□□ -1.19
CLK3-212ENST00000563418 CCDC91Q7Z6B0 441 aa7.62□□□□□ -1.19
CLK3-212ENST00000563418 DCTN1Q14203 1278 aa7.62□□□□□ -1.19
CLK3-212ENST00000563418 FMN1Q68DA7 1419 aa7.62□□□□□ -1.19
CLK3-212ENST00000563418 GABPB1Q06547 395 aaPredicted RBP7.62□□□□□ -1.19
CLK3-212ENST00000563418 NEFHP12036 1026 aa7.62□□□□□ -1.19
CLK3-212ENST00000563418 ZNF592Q92610 1267 aa7.61□□□□□ -1.19
CLK3-212ENST00000563418 CCDC34Q96HJ3 373 aa7.61□□□□□ -1.19
CLK3-212ENST00000563418 C22orf23Q9BZE7 217 aa7.61□□□□□ -1.19
CLK3-212ENST00000563418 POGKQ9P215 609 aa7.61□□□□□ -1.19
CLK3-212ENST00000563418 LMOD3Q0VAK6 560 aa7.61□□□□□ -1.19
CLK3-212ENST00000563418 IVLP07476 585 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 KRT222Q8N1A0 295 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 GNL2Q13823 731 aaKnown RBP7.6□□□□□ -1.19
CLK3-212ENST00000563418 CRBNQ96SW2 442 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 PAIP2Q9BPZ3 127 aaKnown RBP7.6□□□□□ -1.19
CLK3-212ENST00000563418 PLEKHH2Q8IVE3 1493 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 KIAA0754O94854 1291 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 DMTNQ08495 405 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 TDO2P48775 406 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
CLK3-212ENST00000563418 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
CLK3-212ENST00000563418 ERICH4A6NGS2 130 aa7.59□□□□□ -1.19
CLK3-212ENST00000563418 BRD4O60885 1362 aaPredicted RBP7.59□□□□□ -1.19
CLK3-212ENST00000563418 ERLIN1O75477 346 aa7.59□□□□□ -1.19
CLK3-212ENST00000563418 TTLL5Q6EMB2 1281 aa7.59□□□□□ -1.19
CLK3-212ENST00000563418 HMMRO75330 724 aa7.58□□□□□ -1.2
CLK3-212ENST00000563418 REC8O95072 547 aa7.58□□□□□ -1.2
CLK3-212ENST00000563418 CWC22Q9HCG8 908 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms