RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 FBXO31Q5XUX0 539 aaPredicted RBP26.78■■□□□ 1.88
HDGFL3-203ENST00000563404 A2ML1A8K2U0 1454 aa26.78■■□□□ 1.88
HDGFL3-203ENST00000563404 IQSEC2Q5JU85 1478 aa26.78■■□□□ 1.88
HDGFL3-203ENST00000563404 DNMT1P26358 1616 aaKnown RBP26.76■■□□□ 1.87
HDGFL3-203ENST00000563404 KDM5DQ9BY66 1539 aa26.75■■□□□ 1.87
HDGFL3-203ENST00000563404 KANK4Q5T7N3 995 aaPredicted RBP26.74■■□□□ 1.87
HDGFL3-203ENST00000563404 PZPP20742 1482 aa26.74■■□□□ 1.87
HDGFL3-203ENST00000563404 TNRQ92752 1358 aa26.72■■□□□ 1.87
HDGFL3-203ENST00000563404 FAM135AQ9P2D6 1515 aa26.72■■□□□ 1.87
HDGFL3-203ENST00000563404 WASHC2CQ9Y4E1 1318 aa26.71■■□□□ 1.87
HDGFL3-203ENST00000563404 TSPY4P0CV99 314 aa26.71■■□□□ 1.87
HDGFL3-203ENST00000563404 TSPY10P0CW01 314 aa26.71■■□□□ 1.87
HDGFL3-203ENST00000563404 MAP3K1Q13233 1512 aa26.67■■□□□ 1.86
HDGFL3-203ENST00000563404 MAST1Q9Y2H9 1570 aa26.67■■□□□ 1.86
HDGFL3-203ENST00000563404 NEURL4Q96JN8 1562 aa26.64■■□□□ 1.86
HDGFL3-203ENST00000563404 DISP3Q9P2K9 1392 aa26.64■■□□□ 1.86
HDGFL3-203ENST00000563404 MIA2Q96PC5 1412 aa26.64■■□□□ 1.85
HDGFL3-203ENST00000563404 RNF17Q9BXT8 1623 aaKnown RBP26.63■■□□□ 1.85
HDGFL3-203ENST00000563404 MYOM3Q5VTT5 1437 aa26.63■■□□□ 1.85
HDGFL3-203ENST00000563404 POLR1AO95602 1720 aaPredicted RBP26.6■■□□□ 1.85
HDGFL3-203ENST00000563404 ILDR2Q71H61 639 aa26.6■■□□□ 1.85
HDGFL3-203ENST00000563404 ABCC3O15438 1527 aa26.6■■□□□ 1.85
HDGFL3-203ENST00000563404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.59■■□□□ 1.85
HDGFL3-203ENST00000563404 UBAP1LF5GYI3 381 aa26.59■■□□□ 1.85
HDGFL3-203ENST00000563404 NLRP1Q9C000 1473 aa26.58■■□□□ 1.85
HDGFL3-203ENST00000563404 MROH1Q8NDA8 1641 aa26.57■■□□□ 1.84
HDGFL3-203ENST00000563404 UGGT1Q9NYU2 1555 aa26.55■■□□□ 1.84
HDGFL3-203ENST00000563404 EIF2AK4Q9P2K8 1649 aaKnown RBP26.55■■□□□ 1.84
HDGFL3-203ENST00000563404 ANKLE2Q86XL3 938 aa26.54■■□□□ 1.84
HDGFL3-203ENST00000563404 THEMISQ8N1K5 641 aaPredicted RBP26.54■■□□□ 1.84
HDGFL3-203ENST00000563404 SPATA31D1Q6ZQQ2 1576 aa26.53■■□□□ 1.84
HDGFL3-203ENST00000563404 ZC3H13Q5T200 1668 aaKnown RBP26.53■■□□□ 1.84
HDGFL3-203ENST00000563404 SHANK2Q9UPX8 1470 aa26.51■■□□□ 1.83
HDGFL3-203ENST00000563404 ERVK-7P63135 1459 aa26.5■■□□□ 1.83
HDGFL3-203ENST00000563404 DUOX2Q9NRD8 1548 aa26.49■■□□□ 1.83
HDGFL3-203ENST00000563404 MED14O60244 1454 aa26.49■■□□□ 1.83
HDGFL3-203ENST00000563404 VWDEQ8N2E2 1590 aa26.49■■□□□ 1.83
HDGFL3-203ENST00000563404 ABCC5O15440 1437 aa26.48■■□□□ 1.83
HDGFL3-203ENST00000563404 DEPDC5O75140 1603 aa26.48■■□□□ 1.83
HDGFL3-203ENST00000563404 CPS1P31327 1500 aa26.48■■□□□ 1.83
HDGFL3-203ENST00000563404 CEP152O94986 1710 aa26.48■■□□□ 1.83
HDGFL3-203ENST00000563404 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
HDGFL3-203ENST00000563404 KIF15Q9NS87 1388 aa26.46■■□□□ 1.83
HDGFL3-203ENST00000563404 PTPN23Q9H3S7 1636 aa26.45■■□□□ 1.82
HDGFL3-203ENST00000563404 CROCC2H7BZ55 1655 aa26.44■■□□□ 1.82
HDGFL3-203ENST00000563404 RRP7BPQ9NSQ0 103 aa26.43■■□□□ 1.82
HDGFL3-203ENST00000563404 PRDM15P57071 1507 aaPredicted RBP26.41■■□□□ 1.82
HDGFL3-203ENST00000563404 IQGAP1P46940 1657 aa26.41■■□□□ 1.82
HDGFL3-203ENST00000563404 DAPK1P53355 1430 aa26.4■■□□□ 1.82
HDGFL3-203ENST00000563404 ERBINQ96RT1 1412 aa26.4■■□□□ 1.82
HDGFL3-203ENST00000563404 CFAP65Q6ZU64 1925 aaKnown RBP26.39■■□□□ 1.82
HDGFL3-203ENST00000563404 FGD6Q6ZV73 1430 aa26.39■■□□□ 1.81
HDGFL3-203ENST00000563404 SOCS7O14512 581 aa26.38■■□□□ 1.81
HDGFL3-203ENST00000563404 PIP4K2BP78356 416 aa26.38■■□□□ 1.81
HDGFL3-203ENST00000563404 APLP2Q06481 763 aa26.38■■□□□ 1.81
HDGFL3-203ENST00000563404 UBR1Q8IWV7 1749 aa26.38■■□□□ 1.81
HDGFL3-203ENST00000563404 ARHGAP31Q2M1Z3 1444 aa26.38■■□□□ 1.81
HDGFL3-203ENST00000563404 TOM1O60784 492 aa26.36■■□□□ 1.81
HDGFL3-203ENST00000563404 SCAF1Q9H7N4 1312 aaKnown RBP26.36■■□□□ 1.81
HDGFL3-203ENST00000563404 ALKQ9UM73 1620 aa26.36■■□□□ 1.81
HDGFL3-203ENST00000563404 STRCP1A6NGW2 1772 aa26.35■■□□□ 1.81
HDGFL3-203ENST00000563404 HSPA1LP34931 641 aa26.35■■□□□ 1.81
HDGFL3-203ENST00000563404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.34■■□□□ 1.81
HDGFL3-203ENST00000563404 LTKP29376 864 aa26.32■■□□□ 1.8
HDGFL3-203ENST00000563404 CHIC2Q9UKJ5 165 aa26.32■■□□□ 1.8
HDGFL3-203ENST00000563404 ARHGAP23Q9P227 1491 aa26.31■■□□□ 1.8
HDGFL3-203ENST00000563404 SCAF11Q99590 1463 aaKnown RBP26.3■■□□□ 1.8
HDGFL3-203ENST00000563404 LRRC7Q96NW7 1537 aa26.3■■□□□ 1.8
HDGFL3-203ENST00000563404 SLIT1O75093 1534 aa26.29■■□□□ 1.8
HDGFL3-203ENST00000563404 ANKRD30AQ9BXX3 1397 aa26.27■■□□□ 1.8
HDGFL3-203ENST00000563404 TXNDC2Q86VQ3 553 aa26.26■■□□□ 1.79
HDGFL3-203ENST00000563404 PIK3C2BO00750 1634 aa26.25■■□□□ 1.79
HDGFL3-203ENST00000563404 LMTK2Q8IWU2 1503 aa26.25■■□□□ 1.79
HDGFL3-203ENST00000563404 KANK1Q14678 1352 aa26.24■■□□□ 1.79
HDGFL3-203ENST00000563404 SYNMO15061 1565 aa26.23■■□□□ 1.79
HDGFL3-203ENST00000563404 TMEM2Q9UHN6 1383 aa26.2■■□□□ 1.79
HDGFL3-203ENST00000563404 ADGRL2O95490 1459 aa26.2■■□□□ 1.78
HDGFL3-203ENST00000563404 IDI1Q13907 227 aa26.2■■□□□ 1.78
HDGFL3-203ENST00000563404 MED1Q15648 1581 aaPredicted RBP26.2■■□□□ 1.78
HDGFL3-203ENST00000563404 EID1Q9Y6B2 187 aa26.18■■□□□ 1.78
HDGFL3-203ENST00000563404 NOS1P29475 1434 aa26.16■■□□□ 1.78
HDGFL3-203ENST00000563404 EFCAB6Q5THR3 1501 aa26.16■■□□□ 1.78
HDGFL3-203ENST00000563404 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
HDGFL3-203ENST00000563404 STAG3Q9UJ98 1225 aa26.14■■□□□ 1.78
HDGFL3-203ENST00000563404 KDM5AP29375 1690 aaKnown RBP26.14■■□□□ 1.78
HDGFL3-203ENST00000563404 XIRP1Q702N8 1843 aaKnown RBP26.12■■□□□ 1.77
HDGFL3-203ENST00000563404 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
HDGFL3-203ENST00000563404 ANKRD50Q9ULJ7 1429 aa26.09■■□□□ 1.77
HDGFL3-203ENST00000563404 TET3O43151 1660 aa26.09■■□□□ 1.77
HDGFL3-203ENST00000563404 ADGRB3O60242 1522 aa26.08■■□□□ 1.77
HDGFL3-203ENST00000563404 SLC26A8Q96RN1 970 aa26.06■■□□□ 1.76
HDGFL3-203ENST00000563404 SLC52A1Q9NWF4 448 aa26.05■■□□□ 1.76
HDGFL3-203ENST00000563404 KCNA6P17658 529 aa26.03■■□□□ 1.76
HDGFL3-203ENST00000563404 RPRD2Q5VT52 1461 aaKnown RBP26.03■■□□□ 1.76
HDGFL3-203ENST00000563404 TMEM94Q12767 1356 aa26.02■■□□□ 1.76
HDGFL3-203ENST00000563404 RBM33Q96EV2 1170 aaKnown RBP25.99■■□□□ 1.75
HDGFL3-203ENST00000563404 ZFYVE9O95405 1425 aa25.98■■□□□ 1.75
HDGFL3-203ENST00000563404 UNC13BO14795 1591 aa25.97■■□□□ 1.75
HDGFL3-203ENST00000563404 MYO5BQ9ULV0 1848 aa25.95■■□□□ 1.75
HDGFL3-203ENST00000563404 NWD1Q149M9 1564 aa25.95■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms