RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 DUOX2Q9NRD8 1548 aa19.08■□□□□ 0.64
FANCA-210ENST00000563318 MROH1Q8NDA8 1641 aa19.07■□□□□ 0.64
FANCA-210ENST00000563318 PTPRKQ15262 1439 aa19.07■□□□□ 0.64
FANCA-210ENST00000563318 NCOA1Q15788 1441 aa19.06■□□□□ 0.64
FANCA-210ENST00000563318 KIF15Q9NS87 1388 aa19.05■□□□□ 0.64
FANCA-210ENST00000563318 CEBPAP49715 358 aaPredicted RBP19.04■□□□□ 0.64
FANCA-210ENST00000563318 ERBINQ96RT1 1412 aa19.04■□□□□ 0.64
FANCA-210ENST00000563318 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
FANCA-210ENST00000563318 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
FANCA-210ENST00000563318 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
FANCA-210ENST00000563318 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
FANCA-210ENST00000563318 ZMYM3Q14202 1370 aa19.02■□□□□ 0.64
FANCA-210ENST00000563318 NPATQ14207 1427 aa19.01■□□□□ 0.63
FANCA-210ENST00000563318 KIF3BO15066 747 aa19.01■□□□□ 0.63
FANCA-210ENST00000563318 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
FANCA-210ENST00000563318 DEPDC5O75140 1603 aa19■□□□□ 0.63
FANCA-210ENST00000563318 GGT6Q6P531 493 aa19■□□□□ 0.63
FANCA-210ENST00000563318 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
FANCA-210ENST00000563318 PREX1Q8TCU6 1659 aa18.99■□□□□ 0.63
FANCA-210ENST00000563318 ANKRD30AQ9BXX3 1397 aa18.99■□□□□ 0.63
FANCA-210ENST00000563318 ABCC3O15438 1527 aa18.98■□□□□ 0.63
FANCA-210ENST00000563318 ROCK1Q13464 1354 aa18.97■□□□□ 0.63
FANCA-210ENST00000563318 FAM50AQ14320 339 aaKnown RBP18.97■□□□□ 0.63
FANCA-210ENST00000563318 VWDEQ8N2E2 1590 aa18.97■□□□□ 0.63
FANCA-210ENST00000563318 RRP7BPQ9NSQ0 103 aa18.96■□□□□ 0.63
FANCA-210ENST00000563318 ZC3H13Q5T200 1668 aaKnown RBP18.95■□□□□ 0.62
FANCA-210ENST00000563318 PZPP20742 1482 aa18.95■□□□□ 0.62
FANCA-210ENST00000563318 SETD1BQ9UPS6 1966 aaKnown RBP18.95■□□□□ 0.62
FANCA-210ENST00000563318 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
FANCA-210ENST00000563318 LMTK2Q8IWU2 1503 aa18.92■□□□□ 0.62
FANCA-210ENST00000563318 ESF1Q9H501 851 aaKnown RBP18.92■□□□□ 0.62
FANCA-210ENST00000563318 UHRF1BP1Q6BDS2 1440 aa18.91■□□□□ 0.62
FANCA-210ENST00000563318 ARHGAP31Q2M1Z3 1444 aa18.9■□□□□ 0.62
FANCA-210ENST00000563318 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
FANCA-210ENST00000563318 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
FANCA-210ENST00000563318 WASHC2CQ9Y4E1 1318 aa18.89■□□□□ 0.61
FANCA-210ENST00000563318 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.61
FANCA-210ENST00000563318 SPATA31D1Q6ZQQ2 1576 aa18.88■□□□□ 0.61
FANCA-210ENST00000563318 CEP152O94986 1710 aa18.87■□□□□ 0.61
FANCA-210ENST00000563318 HSPA2P54652 639 aa18.87■□□□□ 0.61
FANCA-210ENST00000563318 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
FANCA-210ENST00000563318 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
FANCA-210ENST00000563318 UNC13BO14795 1591 aa18.85■□□□□ 0.61
FANCA-210ENST00000563318 FBXO31Q5XUX0 539 aaPredicted RBP18.85■□□□□ 0.61
FANCA-210ENST00000563318 CEP170BQ9Y4F5 1589 aaPredicted RBP18.84■□□□□ 0.61
FANCA-210ENST00000563318 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
FANCA-210ENST00000563318 STRCQ7RTU9 1775 aa18.83■□□□□ 0.6
FANCA-210ENST00000563318 TNRQ92752 1358 aa18.82■□□□□ 0.6
FANCA-210ENST00000563318 A2ML1A8K2U0 1454 aa18.82■□□□□ 0.6
FANCA-210ENST00000563318 EFCAB6Q5THR3 1501 aa18.81■□□□□ 0.6
FANCA-210ENST00000563318 NAIPQ13075 1403 aa18.8■□□□□ 0.6
FANCA-210ENST00000563318 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
FANCA-210ENST00000563318 PLA2R1Q13018 1463 aa18.78■□□□□ 0.6
FANCA-210ENST00000563318 KANK1Q14678 1352 aa18.77■□□□□ 0.6
FANCA-210ENST00000563318 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
FANCA-210ENST00000563318 NOS1P29475 1434 aa18.76■□□□□ 0.59
FANCA-210ENST00000563318 IQGAP3Q86VI3 1631 aa18.76■□□□□ 0.59
FANCA-210ENST00000563318 GCC2Q8IWJ2 1684 aa18.76■□□□□ 0.59
FANCA-210ENST00000563318 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
FANCA-210ENST00000563318 TET3O43151 1660 aa18.75■□□□□ 0.59
FANCA-210ENST00000563318 RPRD2Q5VT52 1461 aaKnown RBP18.74■□□□□ 0.59
FANCA-210ENST00000563318 MSH5O43196 834 aa18.74■□□□□ 0.59
FANCA-210ENST00000563318 ITGAEP38570 1179 aa18.74■□□□□ 0.59
FANCA-210ENST00000563318 SYNMO15061 1565 aa18.73■□□□□ 0.59
FANCA-210ENST00000563318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.73■□□□□ 0.594e-6■□□□□ 11.1
FANCA-210ENST00000563318 PTPRTO14522 1441 aa18.72■□□□□ 0.59
FANCA-210ENST00000563318 CNKSR2Q8WXI2 1034 aa18.71■□□□□ 0.59
FANCA-210ENST00000563318 UGGT1Q9NYU2 1555 aa18.69■□□□□ 0.58
FANCA-210ENST00000563318 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
FANCA-210ENST00000563318 UBR1Q8IWV7 1749 aa18.68■□□□□ 0.58
FANCA-210ENST00000563318 E9PCH4 1651 aa18.67■□□□□ 0.58
FANCA-210ENST00000563318 KDM5AP29375 1690 aaKnown RBP18.66■□□□□ 0.58
FANCA-210ENST00000563318 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
FANCA-210ENST00000563318 NUP155O75694 1391 aa18.66■□□□□ 0.58
FANCA-210ENST00000563318 PIK3C2BO00750 1634 aa18.65■□□□□ 0.58
FANCA-210ENST00000563318 SLIT1O75093 1534 aa18.64■□□□□ 0.58
FANCA-210ENST00000563318 MED14O60244 1454 aa18.64■□□□□ 0.57
FANCA-210ENST00000563318 PKD2Q13563 968 aa18.63■□□□□ 0.57
FANCA-210ENST00000563318 CFAP65Q6ZU64 1925 aaKnown RBP18.62■□□□□ 0.57
FANCA-210ENST00000563318 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
FANCA-210ENST00000563318 NCKAP5LQ9HCH0 1330 aa18.62■□□□□ 0.57
FANCA-210ENST00000563318 POLR1AO95602 1720 aaPredicted RBP18.61■□□□□ 0.57
FANCA-210ENST00000563318 THEMISQ8N1K5 641 aaPredicted RBP18.61■□□□□ 0.57
FANCA-210ENST00000563318 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
FANCA-210ENST00000563318 IDI1Q13907 227 aa18.6■□□□□ 0.57
FANCA-210ENST00000563318 LTBP4Q8N2S1 1624 aa18.6■□□□□ 0.57
FANCA-210ENST00000563318 SLC52A1Q9NWF4 448 aa18.58■□□□□ 0.56
FANCA-210ENST00000563318 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
FANCA-210ENST00000563318 TMEM2Q9UHN6 1383 aa18.55■□□□□ 0.56
FANCA-210ENST00000563318 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
FANCA-210ENST00000563318 NPHP4O75161 1426 aaPredicted RBP18.53■□□□□ 0.56
FANCA-210ENST00000563318 ZFYVE9O95405 1425 aa18.53■□□□□ 0.56
FANCA-210ENST00000563318 ANKLE2Q86XL3 938 aa18.53■□□□□ 0.56
FANCA-210ENST00000563318 TRPM2O94759 1503 aa18.53■□□□□ 0.56
FANCA-210ENST00000563318 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.56
FANCA-210ENST00000563318 LTKP29376 864 aa18.52■□□□□ 0.56
FANCA-210ENST00000563318 IQGAP1P46940 1657 aa18.51■□□□□ 0.55
FANCA-210ENST00000563318 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
FANCA-210ENST00000563318 CLTCL1P53675 1640 aa18.47■□□□□ 0.55
FANCA-210ENST00000563318 ZNF335Q9H4Z2 1342 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms