RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
AC040174.1-201ENST00000563003 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
AC040174.1-201ENST00000563003 PZPP20742 1482 aa18.5■□□□□ 0.55
AC040174.1-201ENST00000563003 ANKRD30BQ9BXX2 1392 aa18.49■□□□□ 0.55
AC040174.1-201ENST00000563003 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
AC040174.1-201ENST00000563003 MAST1Q9Y2H9 1570 aa18.48■□□□□ 0.55
AC040174.1-201ENST00000563003 WDR7Q9Y4E6 1490 aa18.48■□□□□ 0.55
AC040174.1-201ENST00000563003 FOXD1Q16676 465 aa18.47■□□□□ 0.55
AC040174.1-201ENST00000563003 EFCAB2Q5VUJ9 269 aa18.47■□□□□ 0.55
AC040174.1-201ENST00000563003 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.55
AC040174.1-201ENST00000563003 ARAP3Q8WWN8 1544 aa18.46■□□□□ 0.54
AC040174.1-201ENST00000563003 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
AC040174.1-201ENST00000563003 RPRD2Q5VT52 1461 aaKnown RBP18.43■□□□□ 0.54
AC040174.1-201ENST00000563003 KDM5DQ9BY66 1539 aa18.43■□□□□ 0.54
AC040174.1-201ENST00000563003 ARHGEF12Q9NZN5 1544 aa18.42■□□□□ 0.54
AC040174.1-201ENST00000563003 NUP155O75694 1391 aa18.42■□□□□ 0.54
AC040174.1-201ENST00000563003 SMG6Q86US8 1419 aaKnown RBP18.41■□□□□ 0.54
AC040174.1-201ENST00000563003 ABCC1P33527 1531 aa18.41■□□□□ 0.54
AC040174.1-201ENST00000563003 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
AC040174.1-201ENST00000563003 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
AC040174.1-201ENST00000563003 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.4■□□□□ 0.54
AC040174.1-201ENST00000563003 ABCA9Q8IUA7 1624 aa18.4■□□□□ 0.54
AC040174.1-201ENST00000563003 CCDC7Q96M83 1385 aa18.4■□□□□ 0.54
AC040174.1-201ENST00000563003 ASXL2Q76L83 1435 aa18.39■□□□□ 0.54
AC040174.1-201ENST00000563003 PKD2Q13563 968 aa18.39■□□□□ 0.53
AC040174.1-201ENST00000563003 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC040174.1-201ENST00000563003 L3MBTL2Q969R5 705 aa18.38■□□□□ 0.53
AC040174.1-201ENST00000563003 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
AC040174.1-201ENST00000563003 TRHP20396 242 aaPredicted RBP18.36■□□□□ 0.53
AC040174.1-201ENST00000563003 NEFMP07197 916 aa18.36■□□□□ 0.53
AC040174.1-201ENST00000563003 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
AC040174.1-201ENST00000563003 LAS1LQ9Y4W2 734 aaKnown RBP18.35■□□□□ 0.53
AC040174.1-201ENST00000563003 DUOX2Q9NRD8 1548 aa18.34■□□□□ 0.53
AC040174.1-201ENST00000563003 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
AC040174.1-201ENST00000563003 TEX14Q8IWB6 1497 aa18.34■□□□□ 0.53
AC040174.1-201ENST00000563003 NPM2Q86SE8 214 aaKnown RBP18.34■□□□□ 0.53
AC040174.1-201ENST00000563003 FANCAO15360 1455 aa18.33■□□□□ 0.52
AC040174.1-201ENST00000563003 UNC13BO14795 1591 aa18.32■□□□□ 0.52
AC040174.1-201ENST00000563003 WASHC2CQ9Y4E1 1318 aa18.32■□□□□ 0.52
AC040174.1-201ENST00000563003 FAM135AQ9P2D6 1515 aa18.31■□□□□ 0.52
AC040174.1-201ENST00000563003 RTEL1-TNFRSF6BF6WH68 1400 aa18.31■□□□□ 0.52
AC040174.1-201ENST00000563003 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
AC040174.1-201ENST00000563003 SPAG9O60271 1321 aaKnown RBP18.29■□□□□ 0.52
AC040174.1-201ENST00000563003 UBE2Q2Q8WVN8 375 aa18.29■□□□□ 0.52
AC040174.1-201ENST00000563003 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
AC040174.1-201ENST00000563003 AFAP1Q8N556 730 aa18.27■□□□□ 0.52
AC040174.1-201ENST00000563003 KIF13AQ9H1H9 1805 aa18.26■□□□□ 0.51
AC040174.1-201ENST00000563003 ZFYVE16Q7Z3T8 1539 aa18.26■□□□□ 0.51
AC040174.1-201ENST00000563003 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
AC040174.1-201ENST00000563003 ADGRL1O94910 1474 aa18.25■□□□□ 0.51
AC040174.1-201ENST00000563003 MAGI2Q86UL8 1455 aa18.24■□□□□ 0.51
AC040174.1-201ENST00000563003 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
AC040174.1-201ENST00000563003 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
AC040174.1-201ENST00000563003 PPM1GO15355 546 aaPredicted RBP18.24■□□□□ 0.51
AC040174.1-201ENST00000563003 PDE4AP27815 886 aa18.24■□□□□ 0.51
AC040174.1-201ENST00000563003 SCAPERQ9BY12 1400 aa18.23■□□□□ 0.51
AC040174.1-201ENST00000563003 DIP2BQ9P265 1576 aa18.23■□□□□ 0.51
AC040174.1-201ENST00000563003 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
AC040174.1-201ENST00000563003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.23■□□□□ 0.51
AC040174.1-201ENST00000563003 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
AC040174.1-201ENST00000563003 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
AC040174.1-201ENST00000563003 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
AC040174.1-201ENST00000563003 ATP7AQ04656 1500 aa18.21■□□□□ 0.51
AC040174.1-201ENST00000563003 CD109Q6YHK3 1445 aa18.2■□□□□ 0.5
AC040174.1-201ENST00000563003 CFAP74Q9C0B2 1584 aa18.2■□□□□ 0.5
AC040174.1-201ENST00000563003 BACH2Q9BYV9 841 aa18.2■□□□□ 0.5
AC040174.1-201ENST00000563003 FAM69CQ0P6D2 419 aa18.19■□□□□ 0.5
AC040174.1-201ENST00000563003 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
AC040174.1-201ENST00000563003 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
AC040174.1-201ENST00000563003 EXOC6Q8TAG9 804 aa18.17■□□□□ 0.5
AC040174.1-201ENST00000563003 GSE1Q14687 1217 aa18.16■□□□□ 0.5
AC040174.1-201ENST00000563003 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
AC040174.1-201ENST00000563003 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
AC040174.1-201ENST00000563003 ZNF518AQ6AHZ1 1483 aa18.15■□□□□ 0.5
AC040174.1-201ENST00000563003 MS4A1P11836 297 aa18.15■□□□□ 0.5
AC040174.1-201ENST00000563003 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
AC040174.1-201ENST00000563003 RRP1P56182 461 aaKnown RBP18.14■□□□□ 0.49
AC040174.1-201ENST00000563003 DEPDC5O75140 1603 aa18.14■□□□□ 0.49
AC040174.1-201ENST00000563003 ATP10AO60312 1499 aa18.14■□□□□ 0.49
AC040174.1-201ENST00000563003 PLA2R1Q13018 1463 aa18.14■□□□□ 0.49
AC040174.1-201ENST00000563003 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
AC040174.1-201ENST00000563003 TSPOAP1O95153 1857 aa18.12■□□□□ 0.49
AC040174.1-201ENST00000563003 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
AC040174.1-201ENST00000563003 KIDINS220Q9ULH0 1771 aa18.12■□□□□ 0.49
AC040174.1-201ENST00000563003 NEO1Q92859 1461 aa18.1■□□□□ 0.49
AC040174.1-201ENST00000563003 POGZQ7Z3K3 1410 aa18.09■□□□□ 0.49
AC040174.1-201ENST00000563003 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
AC040174.1-201ENST00000563003 KDM5CP41229 1560 aa18.09■□□□□ 0.49
AC040174.1-201ENST00000563003 NFKBIBQ15653 356 aa18.09■□□□□ 0.49
AC040174.1-201ENST00000563003 TMC1Q8TDI8 760 aa18.09■□□□□ 0.49
AC040174.1-201ENST00000563003 RALGAPBQ86X10 1494 aa18.08■□□□□ 0.49
AC040174.1-201ENST00000563003 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.49
AC040174.1-201ENST00000563003 POLR3GLQ9BT43 218 aa18.08■□□□□ 0.49
AC040174.1-201ENST00000563003 KANK1Q14678 1352 aa18.08■□□□□ 0.48
AC040174.1-201ENST00000563003 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.48
AC040174.1-201ENST00000563003 GLI2P10070 1586 aa18.07■□□□□ 0.48
AC040174.1-201ENST00000563003 FRAT1Q92837 279 aaPredicted RBP18.07■□□□□ 0.48
AC040174.1-201ENST00000563003 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
AC040174.1-201ENST00000563003 E9PCH4 1651 aa18.07■□□□□ 0.48
AC040174.1-201ENST00000563003 KIF3BO15066 747 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms