RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 RTEL1-TNFRSF6BF6WH68 1400 aa10.59□□□□□ -0.71
SCAPER-205ENST00000562948 KDM5DQ9BY66 1539 aa10.58□□□□□ -0.72
SCAPER-205ENST00000562948 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
SCAPER-205ENST00000562948 IQGAP3Q86VI3 1631 aa10.58□□□□□ -0.72
SCAPER-205ENST00000562948 ANKRD30AQ9BXX3 1397 aa10.58□□□□□ -0.72
SCAPER-205ENST00000562948 FAM135AQ9P2D6 1515 aa10.58□□□□□ -0.72
SCAPER-205ENST00000562948 SPAG9O60271 1321 aaKnown RBP10.58□□□□□ -0.72
SCAPER-205ENST00000562948 RNF17Q9BXT8 1623 aaKnown RBP10.57□□□□□ -0.72
SCAPER-205ENST00000562948 CCER1Q8TC90 406 aaPredicted RBP10.57□□□□□ -0.72
SCAPER-205ENST00000562948 PRDM15P57071 1507 aaPredicted RBP10.56□□□□□ -0.72
SCAPER-205ENST00000562948 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
SCAPER-205ENST00000562948 MPHOSPH9Q99550 1183 aa10.55□□□□□ -0.72
SCAPER-205ENST00000562948 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
SCAPER-205ENST00000562948 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
SCAPER-205ENST00000562948 ERBINQ96RT1 1412 aa10.55□□□□□ -0.72
SCAPER-205ENST00000562948 EIF2AK4Q9P2K8 1649 aaKnown RBP10.54□□□□□ -0.72
SCAPER-205ENST00000562948 UGGT1Q9NYU2 1555 aa10.54□□□□□ -0.72
SCAPER-205ENST00000562948 A2MP01023 1474 aa10.53□□□□□ -0.72
SCAPER-205ENST00000562948 DHX29Q7Z478 1369 aaKnown RBP10.53□□□□□ -0.72
SCAPER-205ENST00000562948 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
SCAPER-205ENST00000562948 ANKRD30BQ9BXX2 1392 aa10.53□□□□□ -0.72
SCAPER-205ENST00000562948 ARHGEF40Q8TER5 1519 aa10.53□□□□□ -0.72
SCAPER-205ENST00000562948 RSPH4AQ5TD94 716 aa10.52□□□□□ -0.73
SCAPER-205ENST00000562948 TEX14Q8IWB6 1497 aa10.52□□□□□ -0.73
SCAPER-205ENST00000562948 NUP155O75694 1391 aa10.51□□□□□ -0.73
SCAPER-205ENST00000562948 MYO5BQ9ULV0 1848 aa10.49□□□□□ -0.73
SCAPER-205ENST00000562948 MROH2AA6NES4 1674 aa10.49□□□□□ -0.73
SCAPER-205ENST00000562948 DIEXFQ68CQ4 756 aaKnown RBP10.49□□□□□ -0.73
SCAPER-205ENST00000562948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCAPER-205ENST00000562948 ATP10AO60312 1499 aa10.49□□□□□ -0.73
SCAPER-205ENST00000562948 SPHKAPQ2M3C7 1700 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 TET3O43151 1660 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 KIF3BO15066 747 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 REREQ9P2R6 1566 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 ABCC3O15438 1527 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 CAMSAP1Q5T5Y3 1602 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 TRIM52Q96A61 297 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 CLTCQ00610 1675 aaKnown RBP10.48□□□□□ -0.73
SCAPER-205ENST00000562948 CLTCL1P53675 1640 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 PKD2Q13563 968 aa10.48□□□□□ -0.73
SCAPER-205ENST00000562948 EFCAB6Q5THR3 1501 aa10.47□□□□□ -0.73
SCAPER-205ENST00000562948 SYNMO15061 1565 aa10.47□□□□□ -0.73
SCAPER-205ENST00000562948 ANP32EQ9BTT0 268 aa10.46□□□□□ -0.73
SCAPER-205ENST00000562948 SLC4A1APQ9BWU0 796 aaKnown RBP10.46□□□□□ -0.73
SCAPER-205ENST00000562948 NPATQ14207 1427 aa10.46□□□□□ -0.73
SCAPER-205ENST00000562948 RPRD2Q5VT52 1461 aaKnown RBP10.45□□□□□ -0.74
SCAPER-205ENST00000562948 LMTK2Q8IWU2 1503 aa10.44□□□□□ -0.74
SCAPER-205ENST00000562948 PIK3C2BO00750 1634 aa10.43□□□□□ -0.74
SCAPER-205ENST00000562948 GGT6Q6P531 493 aa10.43□□□□□ -0.74
SCAPER-205ENST00000562948 PTPRTO14522 1441 aa10.43□□□□□ -0.74
SCAPER-205ENST00000562948 AGLP35573 1532 aa10.43□□□□□ -0.74
SCAPER-205ENST00000562948 PREX1Q8TCU6 1659 aa10.43□□□□□ -0.74
SCAPER-205ENST00000562948 IFT172Q9UG01 1749 aa10.41□□□□□ -0.74
SCAPER-205ENST00000562948 FBXO31Q5XUX0 539 aaPredicted RBP10.41□□□□□ -0.74
SCAPER-205ENST00000562948 ERICH6Q7L0X2 663 aa10.41□□□□□ -0.74
SCAPER-205ENST00000562948 YTHDC1Q96MU7 727 aaKnown RBP10.41□□□□□ -0.74
SCAPER-205ENST00000562948 TRPM2O94759 1503 aa10.41□□□□□ -0.74
SCAPER-205ENST00000562948 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.74
SCAPER-205ENST00000562948 C3P01024 1663 aa10.4□□□□□ -0.74
SCAPER-205ENST00000562948 MYT1LQ9UL68 1186 aa10.4□□□□□ -0.74
SCAPER-205ENST00000562948 ZC3H13Q5T200 1668 aaKnown RBP10.4□□□□□ -0.75
SCAPER-205ENST00000562948 SPATA31E1Q6ZUB1 1445 aa10.39□□□□□ -0.75
SCAPER-205ENST00000562948 L3MBTL2Q969R5 705 aa10.39□□□□□ -0.75
SCAPER-205ENST00000562948 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
SCAPER-205ENST00000562948 MLECQ14165 292 aa10.38□□□□□ -0.75
SCAPER-205ENST00000562948 FER1L4A9Z1Z3 1794 aa10.38□□□□□ -0.75
SCAPER-205ENST00000562948 MADDQ8WXG6 1647 aa10.37□□□□□ -0.75
SCAPER-205ENST00000562948 NOS1P29475 1434 aa10.37□□□□□ -0.75
SCAPER-205ENST00000562948 ADAMTSL3P82987 1691 aa10.36□□□□□ -0.75
SCAPER-205ENST00000562948 TMEM131LA2VDJ0 1609 aa10.36□□□□□ -0.75
SCAPER-205ENST00000562948 CEBPAP49715 358 aaPredicted RBP10.35□□□□□ -0.75
SCAPER-205ENST00000562948 PPP1R15AO75807 674 aaPredicted RBP10.35□□□□□ -0.75
SCAPER-205ENST00000562948 PPLO60437 1756 aa10.35□□□□□ -0.75
SCAPER-205ENST00000562948 KIF1BO60333 1816 aa10.34□□□□□ -0.75
SCAPER-205ENST00000562948 HIRIP3Q9BW71 556 aaPredicted RBP10.34□□□□□ -0.75
SCAPER-205ENST00000562948 WASHC2CQ9Y4E1 1318 aa10.34□□□□□ -0.75
SCAPER-205ENST00000562948 ADGRB3O60242 1522 aa10.33□□□□□ -0.76
SCAPER-205ENST00000562948 SPATA31D1Q6ZQQ2 1576 aa10.33□□□□□ -0.76
SCAPER-205ENST00000562948 ARHGAP31Q2M1Z3 1444 aa10.33□□□□□ -0.76
SCAPER-205ENST00000562948 TRPM1Q7Z4N2 1603 aa10.32□□□□□ -0.76
SCAPER-205ENST00000562948 RIMS1Q86UR5 1692 aaKnown RBP10.32□□□□□ -0.76
SCAPER-205ENST00000562948 ERVK-7P63135 1459 aa10.32□□□□□ -0.76
SCAPER-205ENST00000562948 ZMYM3Q14202 1370 aa10.31□□□□□ -0.76
SCAPER-205ENST00000562948 UBR1Q8IWV7 1749 aa10.3□□□□□ -0.76
SCAPER-205ENST00000562948 IDI1Q13907 227 aa10.3□□□□□ -0.76
SCAPER-205ENST00000562948 RGL3Q3MIN7 710 aa10.3□□□□□ -0.76
SCAPER-205ENST00000562948 CCDC144AA2RUR9 1427 aa10.3□□□□□ -0.76
SCAPER-205ENST00000562948 NEXMIFQ5QGS0 1516 aa10.3□□□□□ -0.76
SCAPER-205ENST00000562948 SETD1AO15047 1707 aaKnown RBP10.29□□□□□ -0.76
SCAPER-205ENST00000562948 NRXN3Q9Y4C0 1643 aa10.28□□□□□ -0.76
SCAPER-205ENST00000562948 C11orf95C9JLR9 678 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-205ENST00000562948 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
SCAPER-205ENST00000562948 NUTM2DQ5VT03 806 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-205ENST00000562948 SENP3Q9H4L4 574 aaPredicted RBP10.28□□□□□ -0.76
SCAPER-205ENST00000562948 PRAG1Q86YV5 1406 aa10.27□□□□□ -0.76
SCAPER-205ENST00000562948 ADGRF5Q8IZF2 1346 aa10.27□□□□□ -0.77
SCAPER-205ENST00000562948 UHRF1BP1Q6BDS2 1440 aa10.27□□□□□ -0.77
SCAPER-205ENST00000562948 NRXN1Q9ULB1 1477 aa10.27□□□□□ -0.77
SCAPER-205ENST00000562948 NEURL4Q96JN8 1562 aa10.26□□□□□ -0.77
SCAPER-205ENST00000562948 DCAF11Q8TEB1 546 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms