RNA–Protein interactions for RNA: ENST00000562944.5

GGA2-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-203ENST00000562944 KIF15Q9NS87 1388 aa36.18■■■■□ 3.38
GGA2-203ENST00000562944 EIF2AK4Q9P2K8 1649 aaKnown RBP36.18■■■■□ 3.38
GGA2-203ENST00000562944 KDM5DQ9BY66 1539 aa36.17■■■■□ 3.38
GGA2-203ENST00000562944 PTPRKQ15262 1439 aa36.17■■■■□ 3.38
GGA2-203ENST00000562944 RNF17Q9BXT8 1623 aaKnown RBP36.16■■■■□ 3.38
GGA2-203ENST00000562944 FAM50AQ14320 339 aaKnown RBP36.16■■■■□ 3.38
GGA2-203ENST00000562944 WASHC2CQ9Y4E1 1318 aa36.14■■■■□ 3.38
GGA2-203ENST00000562944 RRP7BPQ9NSQ0 103 aa36.14■■■■□ 3.38
GGA2-203ENST00000562944 CHIC2Q9UKJ5 165 aa36.11■■■■□ 3.37
GGA2-203ENST00000562944 PPARGC1BQ86YN6 1023 aaKnown RBP36.1■■■■□ 3.37
GGA2-203ENST00000562944 ANKRD30AQ9BXX3 1397 aa36.1■■■■□ 3.37
GGA2-203ENST00000562944 ERBINQ96RT1 1412 aa36.09■■■■□ 3.37
GGA2-203ENST00000562944 NCOA1Q15788 1441 aa36.07■■■■□ 3.36
GGA2-203ENST00000562944 MROH1Q8NDA8 1641 aa36.06■■■■□ 3.36
GGA2-203ENST00000562944 ADGRL2O95490 1459 aa36.05■■■■□ 3.36
GGA2-203ENST00000562944 PZPP20742 1482 aa36.05■■■■□ 3.36
GGA2-203ENST00000562944 ABCC3O15438 1527 aa36.03■■■■□ 3.36
GGA2-203ENST00000562944 MYO3AQ8NEV4 1616 aa36.01■■■■□ 3.35
GGA2-203ENST00000562944 ZC3H13Q5T200 1668 aaKnown RBP36■■■■□ 3.35
GGA2-203ENST00000562944 FBXO31Q5XUX0 539 aaPredicted RBP36■■■■□ 3.35
GGA2-203ENST00000562944 STRCQ7RTU9 1775 aa35.99■■■■□ 3.35
GGA2-203ENST00000562944 ZNF142P52746 1687 aaPredicted RBP35.97■■■■□ 3.35
GGA2-203ENST00000562944 PRDM15P57071 1507 aaPredicted RBP35.95■■■■□ 3.35
GGA2-203ENST00000562944 TNRQ92752 1358 aa35.95■■■■□ 3.35
GGA2-203ENST00000562944 CEP170BQ9Y4F5 1589 aaPredicted RBP35.94■■■■□ 3.34
GGA2-203ENST00000562944 DEPDC5O75140 1603 aa35.92■■■■□ 3.34
GGA2-203ENST00000562944 CEP152O94986 1710 aa35.91■■■■□ 3.34
GGA2-203ENST00000562944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.91■■■■□ 3.34
GGA2-203ENST00000562944 DMRT2Q9Y5R5 561 aa35.91■■■■□ 3.34
GGA2-203ENST00000562944 CAMSAP1Q5T5Y3 1602 aa35.9■■■■□ 3.34
GGA2-203ENST00000562944 A2ML1A8K2U0 1454 aa35.89■■■■□ 3.34
GGA2-203ENST00000562944 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.87■■■■□ 3.332e-11■□□□□ 9.4
GGA2-203ENST00000562944 ANKRD50Q9ULJ7 1429 aa35.84■■■■□ 3.33
GGA2-203ENST00000562944 KANK1Q14678 1352 aa35.84■■■■□ 3.33
GGA2-203ENST00000562944 ROCK1Q13464 1354 aa35.83■■■■□ 3.33
GGA2-203ENST00000562944 SPATA31D1Q6ZQQ2 1576 aa35.83■■■■□ 3.33
GGA2-203ENST00000562944 PTPRTO14522 1441 aa35.83■■■■□ 3.33
GGA2-203ENST00000562944 PLA2R1Q13018 1463 aa35.82■■■■□ 3.32
GGA2-203ENST00000562944 ARHGAP31Q2M1Z3 1444 aa35.82■■■■□ 3.32
GGA2-203ENST00000562944 ERVK-7P63135 1459 aa35.81■■■■□ 3.32
GGA2-203ENST00000562944 VWDEQ8N2E2 1590 aa35.81■■■■□ 3.32
GGA2-203ENST00000562944 NLRP1Q9C000 1473 aa35.8■■■■□ 3.32
GGA2-203ENST00000562944 RRBP1Q9P2E9 1410 aaKnown RBP35.8■■■■□ 3.32
GGA2-203ENST00000562944 ITGAEP38570 1179 aa35.77■■■■□ 3.32
GGA2-203ENST00000562944 LMTK2Q8IWU2 1503 aa35.77■■■■□ 3.32
GGA2-203ENST00000562944 CFAP65Q6ZU64 1925 aaKnown RBP35.75■■■■□ 3.31
GGA2-203ENST00000562944 NCKAP5LQ9HCH0 1330 aa35.75■■■■□ 3.31
GGA2-203ENST00000562944 PKD2Q13563 968 aa35.74■■■■□ 3.31
GGA2-203ENST00000562944 ILDR1Q86SU0 546 aaPredicted RBP35.73■■■■□ 3.31
GGA2-203ENST00000562944 UGGT1Q9NYU2 1555 aa35.69■■■■□ 3.3
GGA2-203ENST00000562944 THEMISQ8N1K5 641 aaPredicted RBP35.68■■■■□ 3.3
GGA2-203ENST00000562944 EFCAB6Q5THR3 1501 aa35.63■■■■□ 3.29
GGA2-203ENST00000562944 UNC13BO14795 1591 aa35.63■■■■□ 3.29
GGA2-203ENST00000562944 CERKQ8TCT0 537 aa35.61■■■■□ 3.29
GGA2-203ENST00000562944 FBXO41Q8TF61 875 aa35.58■■■■□ 3.29
GGA2-203ENST00000562944 ANKLE2Q86XL3 938 aa35.57■■■■□ 3.28
GGA2-203ENST00000562944 POLR1AO95602 1720 aaPredicted RBP35.57■■■■□ 3.28
GGA2-203ENST00000562944 NOS1P29475 1434 aa35.55■■■■□ 3.28
GGA2-203ENST00000562944 TET3O43151 1660 aa35.55■■■■□ 3.28
GGA2-203ENST00000562944 NEURL4Q96JN8 1562 aa35.55■■■■□ 3.28
GGA2-203ENST00000562944 UBR1Q8IWV7 1749 aa35.54■■■■□ 3.28
GGA2-203ENST00000562944 RPRD2Q5VT52 1461 aaKnown RBP35.54■■■■□ 3.28
GGA2-203ENST00000562944 LTBP4Q8N2S1 1624 aa35.52■■■■□ 3.28
GGA2-203ENST00000562944 SYNMO15061 1565 aa35.51■■■■□ 3.27
GGA2-203ENST00000562944 IQGAP3Q86VI3 1631 aa35.49■■■■□ 3.27
GGA2-203ENST00000562944 GCC2Q8IWJ2 1684 aa35.49■■■■□ 3.27
GGA2-203ENST00000562944 NUP155O75694 1391 aa35.48■■■■□ 3.27
GGA2-203ENST00000562944 PIK3C2BO00750 1634 aa35.47■■■■□ 3.27
GGA2-203ENST00000562944 IDI1Q13907 227 aa35.47■■■■□ 3.27
GGA2-203ENST00000562944 MED14O60244 1454 aa35.47■■■■□ 3.27
GGA2-203ENST00000562944 ZNF335Q9H4Z2 1342 aaPredicted RBP35.45■■■■□ 3.27
GGA2-203ENST00000562944 NAIPQ13075 1403 aa35.45■■■■□ 3.27
GGA2-203ENST00000562944 NPHP4O75161 1426 aaPredicted RBP35.43■■■■□ 3.26
GGA2-203ENST00000562944 ARHGAP23Q9P227 1491 aa35.42■■■■□ 3.26
GGA2-203ENST00000562944 SLC52A1Q9NWF4 448 aa35.42■■■■□ 3.26
GGA2-203ENST00000562944 SLIT1O75093 1534 aa35.42■■■■□ 3.26
GGA2-203ENST00000562944 KDM5AP29375 1690 aaKnown RBP35.4■■■■□ 3.26
GGA2-203ENST00000562944 E9PCH4 1651 aa35.4■■■■□ 3.26
GGA2-203ENST00000562944 STAG3Q9UJ98 1225 aa35.39■■■■□ 3.26
GGA2-203ENST00000562944 HFM1A2PYH4 1435 aa35.37■■■■□ 3.25
GGA2-203ENST00000562944 SCAF11Q99590 1463 aaKnown RBP35.36■■■■□ 3.25
GGA2-203ENST00000562944 TMEM2Q9UHN6 1383 aa35.36■■■■□ 3.25
GGA2-203ENST00000562944 LTKP29376 864 aa35.35■■■■□ 3.25
GGA2-203ENST00000562944 IQGAP1P46940 1657 aa35.35■■■■□ 3.25
GGA2-203ENST00000562944 TXNDC2Q86VQ3 553 aa35.34■■■■□ 3.25
GGA2-203ENST00000562944 ADGRB3O60242 1522 aa35.33■■■■□ 3.25
GGA2-203ENST00000562944 IQSEC2Q5JU85 1478 aa35.32■■■■□ 3.24
GGA2-203ENST00000562944 EID1Q9Y6B2 187 aa35.31■■■■□ 3.24
GGA2-203ENST00000562944 CPS1P31327 1500 aa35.21■■■■□ 3.23
GGA2-203ENST00000562944 TMEM131LA2VDJ0 1609 aa35.21■■■■□ 3.23
GGA2-203ENST00000562944 MYO5BQ9ULV0 1848 aa35.18■■■■□ 3.22
GGA2-203ENST00000562944 TRIM52Q96A61 297 aa35.17■■■■□ 3.22
GGA2-203ENST00000562944 SPHKAPQ2M3C7 1700 aa35.15■■■■□ 3.22
GGA2-203ENST00000562944 ZFYVE9O95405 1425 aa35.15■■■■□ 3.22
GGA2-203ENST00000562944 CHGAP10645 457 aaKnown RBP35.13■■■■□ 3.21
GGA2-203ENST00000562944 RIMS2Q9UQ26 1411 aa35.11■■■■□ 3.21
GGA2-203ENST00000562944 STRCP1A6NGW2 1772 aa35.1■■■■□ 3.21
GGA2-203ENST00000562944 HDGFP51858 240 aaKnown RBP35.08■■■■□ 3.21
GGA2-203ENST00000562944 SLC4A1APQ9BWU0 796 aaKnown RBP35.05■■■■□ 3.2
GGA2-203ENST00000562944 PLEKHG1Q9ULL1 1385 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms