RNA–Protein interactions for RNA: ENST00000562879.5

RPL13-210, Transcript of ribosomal protein L13, humanhuman

TSL 1 (best)

Gene RPL13, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-210ENST00000562879 PTPRKQ15262 1439 aa23.71■■□□□ 1.39
RPL13-210ENST00000562879 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.39
RPL13-210ENST00000562879 ZC3H13Q5T200 1668 aaKnown RBP23.7■■□□□ 1.39
RPL13-210ENST00000562879 GGT6Q6P531 493 aa23.69■■□□□ 1.38
RPL13-210ENST00000562879 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
RPL13-210ENST00000562879 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
RPL13-210ENST00000562879 KIF3BO15066 747 aa23.67■■□□□ 1.38
RPL13-210ENST00000562879 PRDM15P57071 1507 aaPredicted RBP23.66■■□□□ 1.38
RPL13-210ENST00000562879 PLPPR3Q6T4P5 718 aa23.66■■□□□ 1.38
RPL13-210ENST00000562879 PZPP20742 1482 aa23.66■■□□□ 1.38
RPL13-210ENST00000562879 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
RPL13-210ENST00000562879 MYO3AQ8NEV4 1616 aa23.66■■□□□ 1.38
RPL13-210ENST00000562879 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
RPL13-210ENST00000562879 HSPA2P54652 639 aa23.65■■□□□ 1.38
RPL13-210ENST00000562879 STRCQ7RTU9 1775 aa23.65■■□□□ 1.38
RPL13-210ENST00000562879 ABCC3O15438 1527 aa23.64■■□□□ 1.37
RPL13-210ENST00000562879 NCOA1Q15788 1441 aa23.62■■□□□ 1.37
RPL13-210ENST00000562879 CEP170BQ9Y4F5 1589 aaPredicted RBP23.6■■□□□ 1.37
RPL13-210ENST00000562879 ANKRD30AQ9BXX3 1397 aa23.58■■□□□ 1.37
RPL13-210ENST00000562879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.364e-24■□□□□ 8.8
RPL13-210ENST00000562879 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
RPL13-210ENST00000562879 WASHC2CQ9Y4E1 1318 aa23.56■■□□□ 1.36
RPL13-210ENST00000562879 PLA2R1Q13018 1463 aa23.55■■□□□ 1.36
RPL13-210ENST00000562879 CAMSAP1Q5T5Y3 1602 aa23.55■■□□□ 1.36
RPL13-210ENST00000562879 CEP152O94986 1710 aa23.54■■□□□ 1.36
RPL13-210ENST00000562879 SPATA31D1Q6ZQQ2 1576 aa23.54■■□□□ 1.36
RPL13-210ENST00000562879 A2ML1A8K2U0 1454 aa23.53■■□□□ 1.36
RPL13-210ENST00000562879 ARHGAP31Q2M1Z3 1444 aa23.52■■□□□ 1.36
RPL13-210ENST00000562879 LMTK2Q8IWU2 1503 aa23.51■■□□□ 1.35
RPL13-210ENST00000562879 RRP7BPQ9NSQ0 103 aa23.51■■□□□ 1.35
RPL13-210ENST00000562879 PTPRTO14522 1441 aa23.5■■□□□ 1.35
RPL13-210ENST00000562879 TNRQ92752 1358 aa23.5■■□□□ 1.35
RPL13-210ENST00000562879 NLRP1Q9C000 1473 aa23.49■■□□□ 1.35
RPL13-210ENST00000562879 ROCK1Q13464 1354 aa23.49■■□□□ 1.35
RPL13-210ENST00000562879 ERVK-7P63135 1459 aa23.48■■□□□ 1.35
RPL13-210ENST00000562879 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
RPL13-210ENST00000562879 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
RPL13-210ENST00000562879 DMRT2Q9Y5R5 561 aa23.46■■□□□ 1.35
RPL13-210ENST00000562879 RRBP1Q9P2E9 1410 aaKnown RBP23.45■■□□□ 1.34
RPL13-210ENST00000562879 CHIC2Q9UKJ5 165 aa23.44■■□□□ 1.34
RPL13-210ENST00000562879 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
RPL13-210ENST00000562879 UNC13BO14795 1591 aa23.42■■□□□ 1.34
RPL13-210ENST00000562879 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
RPL13-210ENST00000562879 POLR1AO95602 1720 aaPredicted RBP23.39■■□□□ 1.34
RPL13-210ENST00000562879 KANK1Q14678 1352 aa23.39■■□□□ 1.33
RPL13-210ENST00000562879 UGGT1Q9NYU2 1555 aa23.38■■□□□ 1.33
RPL13-210ENST00000562879 PKD2Q13563 968 aa23.37■■□□□ 1.33
RPL13-210ENST00000562879 NEURL4Q96JN8 1562 aa23.36■■□□□ 1.33
RPL13-210ENST00000562879 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
RPL13-210ENST00000562879 RPRD2Q5VT52 1461 aaKnown RBP23.35■■□□□ 1.33
RPL13-210ENST00000562879 UBR1Q8IWV7 1749 aa23.34■■□□□ 1.33
RPL13-210ENST00000562879 TET3O43151 1660 aa23.34■■□□□ 1.33
RPL13-210ENST00000562879 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.33
RPL13-210ENST00000562879 NOS1P29475 1434 aa23.32■■□□□ 1.32
RPL13-210ENST00000562879 GCC2Q8IWJ2 1684 aa23.32■■□□□ 1.32
RPL13-210ENST00000562879 MED14O60244 1454 aa23.31■■□□□ 1.32
RPL13-210ENST00000562879 IQGAP3Q86VI3 1631 aa23.31■■□□□ 1.32
RPL13-210ENST00000562879 ILDR1Q86SU0 546 aaPredicted RBP23.31■■□□□ 1.32
RPL13-210ENST00000562879 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
RPL13-210ENST00000562879 SYNMO15061 1565 aa23.31■■□□□ 1.32
RPL13-210ENST00000562879 CFAP65Q6ZU64 1925 aaKnown RBP23.3■■□□□ 1.32
RPL13-210ENST00000562879 NCKAP5LQ9HCH0 1330 aa23.29■■□□□ 1.32
RPL13-210ENST00000562879 THEMISQ8N1K5 641 aaPredicted RBP23.28■■□□□ 1.32
RPL13-210ENST00000562879 FBXO41Q8TF61 875 aa23.27■■□□□ 1.32
RPL13-210ENST00000562879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.27■■□□□ 1.32
RPL13-210ENST00000562879 ARHGAP23Q9P227 1491 aa23.27■■□□□ 1.32
RPL13-210ENST00000562879 SLIT1O75093 1534 aa23.27■■□□□ 1.32
RPL13-210ENST00000562879 IQSEC2Q5JU85 1478 aa23.26■■□□□ 1.31
RPL13-210ENST00000562879 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
RPL13-210ENST00000562879 CERKQ8TCT0 537 aa23.25■■□□□ 1.31
RPL13-210ENST00000562879 E9PCH4 1651 aa23.22■■□□□ 1.31
RPL13-210ENST00000562879 IQGAP1P46940 1657 aa23.21■■□□□ 1.31
RPL13-210ENST00000562879 NAIPQ13075 1403 aa23.2■■□□□ 1.3
RPL13-210ENST00000562879 ADGRB3O60242 1522 aa23.19■■□□□ 1.3
RPL13-210ENST00000562879 ANKLE2Q86XL3 938 aa23.19■■□□□ 1.3
RPL13-210ENST00000562879 HFM1A2PYH4 1435 aa23.18■■□□□ 1.3
RPL13-210ENST00000562879 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
RPL13-210ENST00000562879 NPHP4O75161 1426 aaPredicted RBP23.17■■□□□ 1.3
RPL13-210ENST00000562879 ITGAEP38570 1179 aa23.15■■□□□ 1.3
RPL13-210ENST00000562879 SLC52A1Q9NWF4 448 aa23.15■■□□□ 1.3
RPL13-210ENST00000562879 IDI1Q13907 227 aa23.14■■□□□ 1.29
RPL13-210ENST00000562879 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.29
RPL13-210ENST00000562879 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
RPL13-210ENST00000562879 NUP155O75694 1391 aa23.13■■□□□ 1.29
RPL13-210ENST00000562879 CPS1P31327 1500 aa23.12■■□□□ 1.29
RPL13-210ENST00000562879 TMEM131LA2VDJ0 1609 aa23.11■■□□□ 1.29
RPL13-210ENST00000562879 LTKP29376 864 aa23.07■■□□□ 1.28
RPL13-210ENST00000562879 SPHKAPQ2M3C7 1700 aa23.07■■□□□ 1.28
RPL13-210ENST00000562879 ZFYVE9O95405 1425 aa23.07■■□□□ 1.28
RPL13-210ENST00000562879 MYO5BQ9ULV0 1848 aa23.06■■□□□ 1.28
RPL13-210ENST00000562879 STRCP1A6NGW2 1772 aa23.05■■□□□ 1.28
RPL13-210ENST00000562879 TXNDC2Q86VQ3 553 aa23.01■■□□□ 1.27
RPL13-210ENST00000562879 EID1Q9Y6B2 187 aa23.01■■□□□ 1.27
RPL13-210ENST00000562879 TRPM2O94759 1503 aa23■■□□□ 1.27
RPL13-210ENST00000562879 STAG3Q9UJ98 1225 aa22.98■■□□□ 1.27
RPL13-210ENST00000562879 NWD1Q149M9 1564 aa22.94■■□□□ 1.26
RPL13-210ENST00000562879 LRRC7Q96NW7 1537 aa22.94■■□□□ 1.26
RPL13-210ENST00000562879 RIMS2Q9UQ26 1411 aa22.94■■□□□ 1.26
RPL13-210ENST00000562879 PLEKHG1Q9ULL1 1385 aa22.94■■□□□ 1.26
RPL13-210ENST00000562879 CLTCL1P53675 1640 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms